Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:41:55 (3059716): wrapper (7.7.26015): starting
17:41:55 (3059716): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 17:41:55] Arguments: --nthreads 3
[2026-01-12 17:41:55] Threads: 3
[2026-01-12 17:41:55] Checking for CVMFS
[2026-01-12 17:41:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 17:41:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 17:41:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 17:41:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 17:41:57] 2.9.2.0 3059913 0 29976 155059 4 1 20780361 36864000 0 130560 0 0 0.000 1335 21190 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 17:41:57] CVMFS is ok
[2026-01-12 17:41:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 17:41:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 17:41:57] Further information can be found at the LHC@home message board.
[2026-01-12 17:41:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 17:41:57] Checking for apptainer binary...
[2026-01-12 17:41:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 17:41:57] Running /usr/bin/apptainer --version
[2026-01-12 17:41:57] apptainer version 1.4.1-1.1
[2026-01-12 17:41:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 17:41:57] thA327
[2026-01-12 17:41:57] apptainer works
[2026-01-12 17:41:57] Set ATHENA_PROC_NUMBER=3
[2026-01-12 17:41:57] Set ATHENA_CORE_NUMBER=3
[2026-01-12 17:41:57] Starting ATLAS job with PandaID=6967236116
[2026-01-12 17:41:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 19:27:36]  *** The last 200 lines of the pilot log: ***
[2026-01-12 19:27:36] 2026-01-12 18:27:07,465 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:07,585 | INFO     | [payload] control thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:07,645 | INFO     | [job] control thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:07,831 | INFO     | [data] control thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,057 | INFO     | [payload] failed_post thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,171 | INFO     | [data] copytool_in thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,218 | INFO     | [job] job monitor thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,590 | INFO     | [payload] validate_post thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,711 | INFO     | [job] validate thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:08,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 19:27:36] 2026-01-12 18:27:08,849 | INFO     | [data] copytool_out thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:09,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:27:36] 2026-01-12 18:27:10,265 | INFO     | [job] queue monitor thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:12,740 | INFO     | [monitor] cgroup control has ended
[2026-01-12 19:27:36] 2026-01-12 18:27:12,846 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:17,083 | INFO     | job.realtimelogging is not enabled
[2026-01-12 19:27:36] 2026-01-12 18:27:18,089 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 19:27:36] 2026-01-12 18:27:18,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587123922752)>', '<ExcThread(monitor, started 140586493409024)>']
[2026-01-12 19:27:36] 2026-01-12 18:27:23,547 | INFO     | all workflow threads have been joined
[2026-01-12 19:27:36] 2026-01-12 18:27:23,548 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 19:27:36] 2026-01-12 18:27:23,548 | INFO     | traces error code: 0
[2026-01-12 19:27:36] 2026-01-12 18:27:23,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 19:27:36] 2026-01-12 18:27:36,492 | INFO     | PID=3063995 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 19:27:36] 2026-01-12 18:27:36,493 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 19:27:36] 2026-01-12 18:27:36,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 19:27:36] 2026-01-12 18:27:36,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 19:27:36] 2026-01-12 18:27:36,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 19:27:36] 2026-01-12 18:27:36,493 | INFO     | [monitor] control thread has ended
[2026-01-12 19:27:36] 2026-01-12 18:27:36,541 [wrapper] ==== pilot stdout END ====
[2026-01-12 19:27:36] 2026-01-12 18:27:36,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 19:27:36] 2026-01-12 18:27:36,546 [wrapper] pilotpid: 3063995
[2026-01-12 19:27:36] 2026-01-12 18:27:36,548 [wrapper] Pilot exit status: 0
[2026-01-12 19:27:36] 2026-01-12 18:27:36,555 [wrapper] pandaids: 6967236116
[2026-01-12 19:27:36] 2026-01-12 18:27:36,571 [wrapper] cleanup supervisor_pilot 3087705 3063996
[2026-01-12 19:27:36] 2026-01-12 18:27:36,573 [wrapper] Test setup, not cleaning
[2026-01-12 19:27:36] 2026-01-12 18:27:36,576 [wrapper] apfmon messages muted
[2026-01-12 19:27:36] 2026-01-12 18:27:36,578 [wrapper] ==== wrapper stdout END ====
[2026-01-12 19:27:36] 2026-01-12 18:27:36,580 [wrapper] ==== wrapper stderr END ====
[2026-01-12 19:27:36]  *** Error codes and diagnostics ***
[2026-01-12 19:27:36]     "exeErrorCode": 0,
[2026-01-12 19:27:36]     "exeErrorDiag": "",
[2026-01-12 19:27:36]     "pilotErrorCode": 0,
[2026-01-12 19:27:36]     "pilotErrorDiag": "",
[2026-01-12 19:27:36]  *** Listing of results directory ***
[2026-01-12 19:27:36] total 555404
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      5112 Jan 12 17:38 queuedata.json
[2026-01-12 19:27:36] -rwx------ 1 boinc boinc     36322 Jan 12 17:41 runpilot2-wrapper.sh
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc       100 Jan 12 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 19:27:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 17:41 run_atlas
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc       105 Jan 12 17:41 job.xml
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc 311572186 Jan 12 17:41 EVNT.48188646._000007.pool.root.1
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc    592412 Jan 12 17:41 input.tar.gz
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc     15847 Jan 12 17:41 start_atlas.sh
[2026-01-12 19:27:36] drwxrwx--x 2 boinc boinc      4096 Jan 12 17:41 shared
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc         0 Jan 12 17:41 boinc_setup_complete
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      6446 Jan 12 17:41 init_data.xml
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc         0 Jan 12 17:41 boinc_lockfile
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      2632 Jan 12 17:41 pandaJob.out
[2026-01-12 19:27:36] -rw------- 1 boinc boinc    988542 Jan 12 17:42 agis_schedconf.cvmfs.json
[2026-01-12 19:27:36] -rw------- 1 boinc boinc   1516240 Jan 12 17:42 agis_ddmendpoints.agis.ALL.json
[2026-01-12 19:27:36] drwx------ 5 boinc boinc      4096 Jan 12 17:42 pilot3
[2026-01-12 19:27:36] -rw------- 1 boinc boinc 250843892 Jan 12 19:26 HITS.48188648._000203.pool.root.1
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc       529 Jan 12 19:26 boinc_task_state.xml
[2026-01-12 19:27:36] -rw------- 1 boinc boinc      1012 Jan 12 19:26 memory_monitor_summary.json
[2026-01-12 19:27:36] -rw------- 1 boinc boinc    296288 Jan 12 19:26 log.48188648._000203.job.log.tgz.1
[2026-01-12 19:27:36] -rw------- 1 boinc boinc      7737 Jan 12 19:27 heartbeat.json
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      8192 Jan 12 19:27 boinc_mmap_file
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc        27 Jan 12 19:27 wrapper_checkpoint.txt
[2026-01-12 19:27:36] -rw------- 1 boinc boinc       747 Jan 12 19:27 pilotlog.txt
[2026-01-12 19:27:36] -rw------- 1 boinc boinc        95 Jan 12 19:27 pilot_heartbeat.json
[2026-01-12 19:27:36] -rw------- 1 boinc boinc    913487 Jan 12 19:27 log.48188648._000203.job.log.1
[2026-01-12 19:27:36] -rw------- 1 boinc boinc       357 Jan 12 19:27 output.list
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc       620 Jan 12 19:27 runtime_log
[2026-01-12 19:27:36] -rw------- 1 boinc boinc   1228800 Jan 12 19:27 result.tar.gz
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      8897 Jan 12 19:27 runtime_log.err
[2026-01-12 19:27:36] -rw------- 1 boinc boinc       659 Jan 12 19:27 k2OLDmc9Zz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBjnKDm1MWgqn.diag
[2026-01-12 19:27:36] -rw-r--r-- 1 boinc boinc      6342 Jan 12 19:27 stderr.txt
[2026-01-12 19:27:36] HITS file was successfully produced:
[2026-01-12 19:27:36] -rw------- 1 boinc boinc 250843892 Jan 12 19:26 shared/HITS.pool.root.1
[2026-01-12 19:27:36]  *** Contents of shared directory: ***
[2026-01-12 19:27:36] total 551044
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc 311572186 Jan 12 17:41 ATLAS.root_0
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc    592412 Jan 12 17:41 input.tar.gz
[2026-01-12 19:27:36] -rw-r--r-- 2 boinc boinc     15847 Jan 12 17:41 start_atlas.sh
[2026-01-12 19:27:36] -rw------- 1 boinc boinc 250843892 Jan 12 19:26 HITS.pool.root.1
[2026-01-12 19:27:36] -rw------- 1 boinc boinc   1228800 Jan 12 19:27 result.tar.gz
19:27:37 (3059716): run_atlas exited; CPU time 18155.204636
19:27:37 (3059716): called boinc_finish(0)

</stderr_txt>
]]>

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