Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:42:28 (31444): wrapper (7.7.26015): starting
17:42:28 (31444): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 17:42:28] Arguments: --nthreads 8
[2026-01-12 17:42:28] Threads: 8
[2026-01-12 17:42:28] Checking for CVMFS
[2026-01-12 17:42:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 17:42:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 17:42:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 17:42:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 17:42:34] 2.11.2.0 5643 39972 100760 155059 0 11 20272596 25165825 96 130560 0 9148619 99.759 8672566 2973 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 17:42:34] CVMFS is ok
[2026-01-12 17:42:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 17:42:34] Checking for apptainer binary...
[2026-01-12 17:42:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 17:42:34] Running /usr/bin/apptainer --version
[2026-01-12 17:42:34] apptainer version 1.3.2-1.el7
[2026-01-12 17:42:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 17:43:00] cg-vwn380.simple-grid.lan
[2026-01-12 17:43:00] apptainer works
[2026-01-12 17:43:00] Set ATHENA_PROC_NUMBER=8
[2026-01-12 17:43:00] Set ATHENA_CORE_NUMBER=8
[2026-01-12 17:43:00] Starting ATLAS job with PandaID=6967236038
[2026-01-12 17:43:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:06:09]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:06:09] 2026-01-12 22:05:00,209 | INFO     | time since job start (19055s) is within the limit (349056.0s)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,741 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 23:06:09] 2026-01-12 22:05:00,742 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-12 23:06:09] 2026-01-12 22:05:00,744 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6967236038/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,745 | INFO     | extracted standard info from prmon json
[2026-01-12 23:06:09] 2026-01-12 22:05:00,745 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 23:06:09] 2026-01-12 22:05:00,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 23:06:09] 2026-01-12 22:05:00,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 23:06:09] 2026-01-12 22:05:00,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 23:06:09] 2026-01-12 22:05:00,752 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:06:09] 2026-01-12 22:05:00,753 | INFO     | sum of square deviations: 8540720135.5
[2026-01-12 23:06:09] 2026-01-12 22:05:00,756 | INFO     | sum of deviations: 184571084280.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,756 | INFO     | mean x: 1768246176.5
[2026-01-12 23:06:09] 2026-01-12 22:05:00,757 | INFO     | mean y: 2477979.238410596
[2026-01-12 23:06:09] 2026-01-12 22:05:00,757 | INFO     | intersect: -38210589407.66792
[2026-01-12 23:06:09] 2026-01-12 22:05:00,757 | INFO     | chi2: 7.367940054859201
[2026-01-12 23:06:09] 2026-01-12 22:05:00,758 | INFO     | sum of square deviations: 8123493708.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,768 | INFO     | sum of deviations: 201183909192.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,768 | INFO     | mean x: 1768246024.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,768 | INFO     | mean y: 2483951.430976431
[2026-01-12 23:06:09] 2026-01-12 22:05:00,769 | INFO     | intersect: -43789345070.50775
[2026-01-12 23:06:09] 2026-01-12 22:05:00,769 | INFO     | chi2: 6.641527329858745
[2026-01-12 23:06:09] 2026-01-12 22:05:00,769 | INFO     | current chi2=6.641527329858745 (change=9.859101995833726 %)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,769 | INFO     | right removable region: 296
[2026-01-12 23:06:09] 2026-01-12 22:05:00,770 | INFO     | sum of square deviations: 8123493708.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,773 | INFO     | sum of deviations: 80705865353.00002
[2026-01-12 23:06:09] 2026-01-12 22:05:00,773 | INFO     | mean x: 1768246329.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,773 | INFO     | mean y: 2515917.5016835015
[2026-01-12 23:06:09] 2026-01-12 22:05:00,773 | INFO     | intersect: -17564783974.498253
[2026-01-12 23:06:09] 2026-01-12 22:05:00,774 | INFO     | chi2: 2.840996885590078
[2026-01-12 23:06:09] 2026-01-12 22:05:00,774 | INFO     | current chi2=2.840996885590078 (change=61.441096637092976 %)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,775 | INFO     | sum of square deviations: 7720081493.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,778 | INFO     | sum of deviations: 12758314456.000008
[2026-01-12 23:06:09] 2026-01-12 22:05:00,778 | INFO     | mean x: 1768246481.5
[2026-01-12 23:06:09] 2026-01-12 22:05:00,785 | INFO     | mean y: 2541529.51369863
[2026-01-12 23:06:09] 2026-01-12 22:05:00,785 | INFO     | intersect: -2919687292.4421577
[2026-01-12 23:06:09] 2026-01-12 22:05:00,786 | INFO     | chi2: 0.8502019740833557
[2026-01-12 23:06:09] 2026-01-12 22:05:00,786 | INFO     | current chi2=0.8502019740833557 (change=70.07381534292783 %)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,786 | INFO     | sum of square deviations: 7330250928.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,789 | INFO     | sum of deviations: 1888076941.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,789 | INFO     | mean x: 1768246634.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,790 | INFO     | mean y: 2545757.0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,790 | INFO     | intersect: -452907368.47263277
[2026-01-12 23:06:09] 2026-01-12 22:05:00,790 | INFO     | chi2: 0.7879594003178345
[2026-01-12 23:06:09] 2026-01-12 22:05:00,790 | INFO     | current chi2=0.7879594003178345 (change=7.320916166141343 %)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,790 | INFO     | left removable region: 30
[2026-01-12 23:06:09] 2026-01-12 22:05:00,791 | INFO     | sum of square deviations: 5836025702.5
[2026-01-12 23:06:09] 2026-01-12 22:05:00,794 | INFO     | sum of deviations: 14602709784.999998
[2026-01-12 23:06:09] 2026-01-12 22:05:00,794 | INFO     | mean x: 1768246908.5
[2026-01-12 23:06:09] 2026-01-12 22:05:00,794 | INFO     | mean y: 2555785.977443609
[2026-01-12 23:06:09] 2026-01-12 22:05:00,794 | INFO     | intersect: -4421892931.235681
[2026-01-12 23:06:09] 2026-01-12 22:05:00,794 | INFO     | chi2: 0.0009794966445345332
[2026-01-12 23:06:09] 2026-01-12 22:05:00,795 | INFO     | current memory leak: 2.50 B/s (using 266 data points, chi2=0.00)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,795 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | ..............................
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . Timing measurements:
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . get job = 0 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . initial setup = 10 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . payload setup = 156 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . stage-in = 0 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . payload execution = 18556 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . stage-out = 3 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,796 | INFO     | . log creation = 1 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,797 | INFO     | ..............................
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | 
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | job summary report
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | --------------------------------------------------
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | PanDA job id: 6967236038
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | task id: 48188648
[2026-01-12 23:06:09] 2026-01-12 22:05:00,953 | INFO     | errors: (none)
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | pilot state: finished 
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | transexitcode: 0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | exeerrorcode: 0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | exeerrordiag: 
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | exitcode: 0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | exitmsg: OK
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | cpuconsumptiontime: 69585 s
[2026-01-12 23:06:09] 2026-01-12 22:05:00,954 | INFO     | nevents: 400
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | neventsw: 0
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | pid: 9576
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | pgrp: 9576
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | corecount: 8
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | event service: False
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | sizes: {0: 2283299, 1: 2283984, 2: 2284183, 13: 2284183, 23: 2284239, 34: 2284267, 45: 2284423, 56: 2284451, 66: 2284479, 77: 2284507, 88: 2284563, 98: 2284871, 10
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | --------------------------------------------------
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | 
[2026-01-12 23:06:09] 2026-01-12 22:05:00,955 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-12 23:06:09] 2026-01-12 22:05:01,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,537 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,537 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,537 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | job 6967236038 has completed (purged errors)
[2026-01-12 23:06:09] 2026-01-12 22:05:01,539 | INFO     | overall cleanup function is called
[2026-01-12 23:06:09] 2026-01-12 22:05:02,548 | INFO     | --- collectZombieJob: --- 10, [9576]
[2026-01-12 23:06:09] 2026-01-12 22:05:02,548 | INFO     | zombie collector waiting for pid 9576
[2026-01-12 23:06:09] 2026-01-12 22:05:02,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:06:09] 2026-01-12 22:05:02,549 | INFO     | collected zombie processes
[2026-01-12 23:06:09] 2026-01-12 22:05:02,549 | INFO     | will attempt to kill all subprocesses of pid=9576
[2026-01-12 23:06:09] 2026-01-12 22:05:02,640 | INFO     | process IDs to be killed: [9576] (in reverse order)
[2026-01-12 23:06:09] 2026-01-12 22:05:03,668 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:06:09] 2026-01-12 22:05:03,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:06:09] 2026-01-12 22:05:03,670 | INFO     | did not find any defunct processes belonging to 9576
[2026-01-12 23:06:09] 2026-01-12 22:05:03,672 | INFO     | did not find any defunct processes belonging to 9576
[2026-01-12 23:06:09] 2026-01-12 22:05:03,672 | INFO     | ready for new job
[2026-01-12 23:06:09] 2026-01-12 22:05:03,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:06:09] 2026-01-12 22:05:03,674 | INFO     | ***************************************
[2026-01-12 23:06:09] 2026-01-12 22:05:03,675 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:06:09] 2026-01-12 22:05:03,675 | INFO     | ***************************************
[2026-01-12 23:06:09] 2026-01-12 22:05:03,675 | INFO     | 
[2026-01-12 23:06:09] 2026-01-12 22:05:03,675 | INFO     | pilot is running in a VM
[2026-01-12 23:06:09] 2026-01-12 22:05:03,676 | INFO     | architecture information:
[2026-01-12 23:06:09] 2026-01-12 22:05:03,686 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:06:09] 2026-01-12 22:05:03,924 | INFO     | cat /etc/os-release:
[2026-01-12 23:06:09] NAME="CentOS Linux"
[2026-01-12 23:06:09] VERSION="7 (Core)"
[2026-01-12 23:06:09] ID="centos"
[2026-01-12 23:06:09] ID_LIKE="rhel fedora"
[2026-01-12 23:06:09] VERSION_ID="7"
[2026-01-12 23:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:06:09] ANSI_COLOR="0;31"
[2026-01-12 23:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:06:09] HOME_URL="https://www.centos.org/"
[2026-01-12 23:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:06:09] 
[2026-01-12 23:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:06:09] 
[2026-01-12 23:06:09] 2026-01-12 22:05:03,925 | INFO     | ***************************************
[2026-01-12 23:06:09] 2026-01-12 22:05:04,428 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-12 23:06:09] 2026-01-12 22:05:04,710 | INFO     | sufficient remaining disk space (496505978880 B)
[2026-01-12 23:06:09] 2026-01-12 22:05:04,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:06:09] 2026-01-12 22:05:04,710 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:06:09] 2026-01-12 22:05:04,710 | INFO     | update_server=False
[2026-01-12 23:06:09] 2026-01-12 22:05:04,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:06:09] 2026-01-12 22:05:04,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:06:09] 2026-01-12 22:05:04,717 | INFO     | aborting loop
[2026-01-12 23:06:09] 2026-01-12 22:05:04,917 | INFO     | all payload control threads have been joined
[2026-01-12 23:06:09] 2026-01-12 22:05:05,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:06:09] 2026-01-12 22:05:05,316 | INFO     | all data control threads have been joined
[2026-01-12 23:06:09] 2026-01-12 22:05:05,645 | INFO     | all job control threads have been joined
[2026-01-12 23:06:09] 2026-01-12 22:05:05,716 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:05,723 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:05,923 | INFO     | [payload] control thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:05,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:06:09] 2026-01-12 22:05:06,271 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,322 | INFO     | [data] control thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:06:09] 2026-01-12 22:05:06,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,599 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,610 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,651 | INFO     | [job] control thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,867 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,909 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,955 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:06,980 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:07,110 | INFO     | [job] validate thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:07,322 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:10,340 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:06:09] 2026-01-12 22:05:33,366 | INFO     | PID=3081 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-12 23:06:09] 2026-01-12 22:05:33,367 | INFO     | .. there are 2 such processes running
[2026-01-12 23:06:09] 2026-01-12 22:05:33,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:06:09] 2026-01-12 22:05:33,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:06:09] 2026-01-12 22:05:33,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:06:09] 2026-01-12 22:05:57,612 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:06:09] 2026-01-12 22:05:59,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521796638528)>', '<ExcThread(monitor, started 140521062266624)>']
[2026-01-12 23:06:09] 2026-01-12 22:05:59,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:06:09] 2026-01-12 22:05:59,527 | INFO     | [monitor] control thread has ended
[2026-01-12 23:06:09] 2026-01-12 22:06:04,029 | INFO     | all workflow threads have been joined
[2026-01-12 23:06:09] 2026-01-12 22:06:04,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:06:09] 2026-01-12 22:06:04,030 | INFO     | traces error code: 0
[2026-01-12 23:06:09] 2026-01-12 22:06:04,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:06:09] 2026-01-12 22:06:04,584 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:06:09] 2026-01-12 22:06:04,666 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:06:09] 2026-01-12 22:06:04,737 [wrapper] pilotpid: 3081
[2026-01-12 23:06:09] 2026-01-12 22:06:04,792 [wrapper] Pilot exit status: 0
[2026-01-12 23:06:09] 2026-01-12 22:06:05,388 [wrapper] pandaids: 6967236038
[2026-01-12 23:06:09] 2026-01-12 22:06:06,503 [wrapper] cleanup supervisor_pilot  6343 3082
[2026-01-12 23:06:09] 2026-01-12 22:06:06,610 [wrapper] Test setup, not cleaning
[2026-01-12 23:06:09] 2026-01-12 22:06:06,721 [wrapper] apfmon messages muted
[2026-01-12 23:06:09] 2026-01-12 22:06:06,857 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:06:09] 2026-01-12 22:06:06,983 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:06:09]  *** Error codes and diagnostics ***
[2026-01-12 23:06:09]     "exeErrorCode": 0,
[2026-01-12 23:06:09]     "exeErrorDiag": "",
[2026-01-12 23:06:09]     "pilotErrorCode": 0,
[2026-01-12 23:06:09]     "pilotErrorDiag": "",
[2026-01-12 23:06:09]  *** Listing of results directory ***
[2026-01-12 23:06:09] total 563128
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc      5112 Jan 12 17:38 queuedata.json
[2026-01-12 23:06:09] -rwx------. 1 boinc boinc     36322 Jan 12 17:41 runpilot2-wrapper.sh
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc       100 Jan 12 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:06:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 17:42 run_atlas
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc       105 Jan 12 17:42 job.xml
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc      6391 Jan 12 17:42 init_data.xml
[2026-01-12 23:06:09] -rw-r--r--. 2 boinc boinc 310150719 Jan 12 17:42 EVNT.48188646._000003.pool.root.1
[2026-01-12 23:06:09] -rw-r--r--. 2 boinc boinc     15847 Jan 12 17:42 start_atlas.sh
[2026-01-12 23:06:09] drwxrwx--x. 2 boinc boinc        68 Jan 12 17:42 shared
[2026-01-12 23:06:09] -rw-r--r--. 2 boinc boinc    592410 Jan 12 17:42 input.tar.gz
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc         0 Jan 12 17:42 boinc_lockfile
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc      2633 Jan 12 17:43 pandaJob.out
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc    988542 Jan 12 17:47 agis_schedconf.cvmfs.json
[2026-01-12 23:06:09] drwx------. 5 boinc boinc      4096 Jan 12 17:47 pilot3
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc 256381277 Jan 12 23:01 HITS.48188648._000125.pool.root.1
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc       531 Jan 12 23:02 boinc_task_state.xml
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc      1025 Jan 12 23:02 memory_monitor_summary.json
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc   1516240 Jan 12 23:03 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc    567571 Jan 12 23:03 log.48188648._000125.job.log.tgz.1
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc        95 Jan 12 23:04 pilot_heartbeat.json
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc      7768 Jan 12 23:05 heartbeat.json
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc        28 Jan 12 23:05 wrapper_checkpoint.txt
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc      8192 Jan 12 23:05 boinc_mmap_file
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc      4883 Jan 12 23:06 pilotlog.txt
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc   2535484 Jan 12 23:06 log.48188648._000125.job.log.1
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc       357 Jan 12 23:06 output.list
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc       620 Jan 12 23:06 runtime_log
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc   3123200 Jan 12 23:06 result.tar.gz
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc      8817 Jan 12 23:06 runtime_log.err
[2026-01-12 23:06:09] -rw-------. 1 boinc boinc       657 Jan 12 23:06 7m9KDmc9Zz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2inKDmQad7Qm.diag
[2026-01-12 23:06:09] -rw-r--r--. 1 boinc boinc     20687 Jan 12 23:06 stderr.txt
[2026-01-12 23:06:10] HITS file was successfully produced:
[2026-01-12 23:06:10] -rw-------. 1 boinc boinc 256381277 Jan 12 23:01 shared/HITS.pool.root.1
[2026-01-12 23:06:10]  *** Contents of shared directory: ***
[2026-01-12 23:06:10] total 556908
[2026-01-12 23:06:10] -rw-r--r--. 2 boinc boinc 310150719 Jan 12 17:42 ATLAS.root_0
[2026-01-12 23:06:10] -rw-r--r--. 2 boinc boinc     15847 Jan 12 17:42 start_atlas.sh
[2026-01-12 23:06:10] -rw-r--r--. 2 boinc boinc    592410 Jan 12 17:42 input.tar.gz
[2026-01-12 23:06:10] -rw-------. 1 boinc boinc 256381277 Jan 12 23:01 HITS.pool.root.1
[2026-01-12 23:06:10] -rw-------. 1 boinc boinc   3123200 Jan 12 23:06 result.tar.gz
23:06:11 (31444): run_atlas exited; CPU time 69774.886827
23:06:11 (31444): called boinc_finish(0)

</stderr_txt>
]]>

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