Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:20 (837889): wrapper (7.7.26015): starting
23:03:20 (837889): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 23:03:20] Arguments: --nthreads 8
[2026-01-12 23:03:20] Threads: 8
[2026-01-12 23:03:20] Checking for CVMFS
[2026-01-12 23:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 23:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 23:03:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 23:03:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 23:03:21] 2.13.3.0 12130 96968 359408 155075 3 141 38249869 40960000 11431 16776704 0 253332311 99.576 279558126 36833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 23:03:21] CVMFS is ok
[2026-01-12 23:03:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 23:03:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 23:03:21] Further information can be found at the LHC@home message board.
[2026-01-12 23:03:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 23:03:21] Checking for apptainer binary...
[2026-01-12 23:03:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 23:03:21] Running /usr/bin/apptainer --version
[2026-01-12 23:03:21] apptainer version 1.4.5-2.el9
[2026-01-12 23:03:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 23:03:21] c6-5-7-4.aglt2.org
[2026-01-12 23:03:21] apptainer works
[2026-01-12 23:03:21] Set ATHENA_PROC_NUMBER=8
[2026-01-12 23:03:21] Set ATHENA_CORE_NUMBER=8
[2026-01-12 23:03:21] Starting ATLAS job with PandaID=6967163161
[2026-01-12 23:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:50:10]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:50:10] 2026-01-13 07:48:57,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:50:10] 2026-01-13 07:48:58,831 | INFO     | time since job start (13518s) is within the limit (349056.0s)
[2026-01-13 02:50:10] 2026-01-13 07:49:00,333 | INFO     | monitor loop #903: job 0:6967163161 is in state 'finished'
[2026-01-13 02:50:10] 2026-01-13 07:49:00,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:50:10] 2026-01-13 07:49:00,838 | INFO     | time since job start (13520s) is within the limit (349056.0s)
[2026-01-13 02:50:10] 2026-01-13 07:49:02,841 | INFO     | monitor loop #904: job 0:6967163161 is in state 'finished'
[2026-01-13 02:50:10] 2026-01-13 07:49:02,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:50:10] 2026-01-13 07:49:02,860 | INFO     | time since job start (13522s) is within the limit (349056.0s)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,326 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 02:50:10] 2026-01-13 07:49:04,342 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3071.363339285714
[2026-01-13 02:50:10] 2026-01-13 07:49:04,376 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6967163161/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,376 | INFO     | extracted standard info from prmon json
[2026-01-13 02:50:10] 2026-01-13 07:49:04,376 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 02:50:10] 2026-01-13 07:49:04,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 02:50:10] 2026-01-13 07:49:04,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 02:50:10] 2026-01-13 07:49:04,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 02:50:10] 2026-01-13 07:49:04,390 | INFO     | fitting pss+swap vs Time
[2026-01-13 02:50:10] 2026-01-13 07:49:04,391 | INFO     | sum of square deviations: 3347513324.2986603
[2026-01-13 02:50:10] 2026-01-13 07:49:04,392 | INFO     | sum of deviations: 64790368516.22172
[2026-01-13 02:50:10] 2026-01-13 07:49:04,392 | INFO     | mean x: 1768283773.434389
[2026-01-13 02:50:10] 2026-01-13 07:49:04,401 | INFO     | mean y: 2509729.0497737555
[2026-01-13 02:50:10] 2026-01-13 07:49:04,401 | INFO     | intersect: -34222225536.514057
[2026-01-13 02:50:10] 2026-01-13 07:49:04,401 | INFO     | chi2: 4.146629751538863
[2026-01-13 02:50:10] 2026-01-13 07:49:04,402 | INFO     | sum of square deviations: 3125393156.500005
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | sum of deviations: 77587039051.33336
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | mean x: 1768283620.9166667
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | mean y: 2518339.685185185
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | intersect: -43894643866.79204
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | chi2: 3.468743209641014
[2026-01-13 02:50:10] 2026-01-13 07:49:04,403 | INFO     | current chi2=3.468743209641014 (change=16.347891722097387 %)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,404 | INFO     | right removable region: 215
[2026-01-13 02:50:10] 2026-01-13 07:49:04,404 | INFO     | sum of square deviations: 3125414763.333324
[2026-01-13 02:50:10] 2026-01-13 07:49:04,413 | INFO     | sum of deviations: 8066502862.611141
[2026-01-13 02:50:10] 2026-01-13 07:49:04,413 | INFO     | mean x: 1768283925.9444444
[2026-01-13 02:50:10] 2026-01-13 07:49:04,413 | INFO     | mean y: 2548571.717592593
[2026-01-13 02:50:10] 2026-01-13 07:49:04,414 | INFO     | intersect: -4561283249.223639
[2026-01-13 02:50:10] 2026-01-13 07:49:04,414 | INFO     | chi2: 1.622660976719505
[2026-01-13 02:50:10] 2026-01-13 07:49:04,414 | INFO     | current chi2=1.622660976719505 (change=60.867956052326186 %)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,414 | INFO     | sum of square deviations: 2913362902.322264
[2026-01-13 02:50:10] 2026-01-13 07:49:04,415 | INFO     | sum of deviations: -13174108110.5782
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | mean x: 1768284078.4549763
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | mean y: 2563778.3601895734
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | intersect: 7998672193.556568
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | chi2: 1.2333562585968716
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | current chi2=1.2333562585968716 (change=23.991747118346403 %)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,416 | INFO     | left removable region: 20
[2026-01-13 02:50:10] 2026-01-13 07:49:04,425 | INFO     | sum of square deviations: 2299527175.815389
[2026-01-13 02:50:10] 2026-01-13 07:49:04,426 | INFO     | sum of deviations: -24307273919.76924
[2026-01-13 02:50:10] 2026-01-13 07:49:04,426 | INFO     | mean x: 1768284200.4307692
[2026-01-13 02:50:10] 2026-01-13 07:49:04,426 | INFO     | mean y: 2594363.4615384615
[2026-01-13 02:50:10] 2026-01-13 07:49:04,426 | INFO     | intersect: 18694336248.4557
[2026-01-13 02:50:10] 2026-01-13 07:49:04,426 | INFO     | chi2: 0.032102230762932074
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | current memory leak: -10.57 B/s (using 195 data points, chi2=0.03)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | could have reported an average CPU frequency of 3049 MHz (11 samples)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | ..............................
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | . Timing measurements:
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | . get job = 0 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | . initial setup = 3 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,427 | INFO     | . payload setup = 9 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,428 | INFO     | . stage-in = 0 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,428 | INFO     | . payload execution = 13463 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,428 | INFO     | . stage-out = 2 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,428 | INFO     | . log creation = 0 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,428 | INFO     | ..............................
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | 
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | job summary report
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | --------------------------------------------------
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | PanDA job id: 6967163161
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | task id: 48188648
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | errors: (none)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | pilot state: finished 
[2026-01-13 02:50:10] 2026-01-13 07:49:04,824 | INFO     | transexitcode: 0
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | exeerrorcode: 0
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | exeerrordiag: 
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | exitcode: 0
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | exitmsg: OK
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | cpuconsumptiontime: 48860 s
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | nevents: 400
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | neventsw: 0
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | pid: 849136
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | pgrp: 849136
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | corecount: 8
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | event service: False
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | sizes: {0: 2284115, 7: 2284377, 11: 2284405, 13477: 2315233, 13480: 2324231, 13483: 2324287, 13505: 2324609}
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | --------------------------------------------------
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | 
[2026-01-13 02:50:10] 2026-01-13 07:49:04,825 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 02:50:10] 2026-01-13 07:49:04,867 | INFO     | time since job start (13524s) is within the limit (349056.0s)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 02:50:10] 2026-01-13 07:49:04,875 | INFO     | job 6967163161 has completed (purged errors)
[2026-01-13 02:50:10] 2026-01-13 07:49:04,876 | INFO     | overall cleanup function is called
[2026-01-13 02:50:10] 2026-01-13 07:49:05,888 | INFO     | --- collectZombieJob: --- 10, [849136]
[2026-01-13 02:50:10] 2026-01-13 07:49:05,888 | INFO     | zombie collector waiting for pid 849136
[2026-01-13 02:50:10] 2026-01-13 07:49:05,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 02:50:10] 2026-01-13 07:49:05,888 | INFO     | collected zombie processes
[2026-01-13 02:50:10] 2026-01-13 07:49:05,888 | INFO     | will attempt to kill all subprocesses of pid=849136
[2026-01-13 02:50:10] 2026-01-13 07:49:06,451 | INFO     | process IDs to be killed: [849136] (in reverse order)
[2026-01-13 02:50:10] 2026-01-13 07:49:06,642 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 02:50:10] 2026-01-13 07:49:06,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 02:50:10] 2026-01-13 07:49:06,657 | INFO     | did not find any defunct processes belonging to 849136
[2026-01-13 02:50:10] 2026-01-13 07:49:06,669 | INFO     | did not find any defunct processes belonging to 849136
[2026-01-13 02:50:10] 2026-01-13 07:49:06,670 | INFO     | ready for new job
[2026-01-13 02:50:10] 2026-01-13 07:49:06,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 02:50:10] 2026-01-13 07:49:06,673 | INFO     | ***************************************
[2026-01-13 02:50:10] 2026-01-13 07:49:06,673 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 02:50:10] 2026-01-13 07:49:06,673 | INFO     | ***************************************
[2026-01-13 02:50:10] 2026-01-13 07:49:06,673 | INFO     | 
[2026-01-13 02:50:10] 2026-01-13 07:49:06,676 | INFO     | architecture information:
[2026-01-13 02:50:10] 2026-01-13 07:49:06,677 | INFO     | executing command: cat /etc/os-release
[2026-01-13 02:50:10] 2026-01-13 07:49:06,699 | INFO     | cat /etc/os-release:
[2026-01-13 02:50:10] NAME="CentOS Linux"
[2026-01-13 02:50:10] VERSION="7 (Core)"
[2026-01-13 02:50:10] ID="centos"
[2026-01-13 02:50:10] ID_LIKE="rhel fedora"
[2026-01-13 02:50:10] VERSION_ID="7"
[2026-01-13 02:50:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:50:10] ANSI_COLOR="0;31"
[2026-01-13 02:50:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:50:10] HOME_URL="https://www.centos.org/"
[2026-01-13 02:50:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:50:10] 
[2026-01-13 02:50:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:50:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:50:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:50:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:50:10] 
[2026-01-13 02:50:10] 2026-01-13 07:49:06,700 | INFO     | ***************************************
[2026-01-13 02:50:10] 2026-01-13 07:49:07,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 02:50:10] 2026-01-13 07:49:07,272 | INFO     | sufficient remaining disk space (71290585088 B)
[2026-01-13 02:50:10] 2026-01-13 07:49:07,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:50:10] 2026-01-13 07:49:07,273 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:50:10] 2026-01-13 07:49:07,273 | INFO     | update_server=False
[2026-01-13 02:50:10] 2026-01-13 07:49:07,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:50:10] 2026-01-13 07:49:07,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:50:10] 2026-01-13 07:49:07,273 | INFO     | aborting loop
[2026-01-13 02:50:10] 2026-01-13 07:49:07,337 | INFO     | all data control threads have been joined
[2026-01-13 02:50:10] 2026-01-13 07:49:07,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:50:10] 2026-01-13 07:49:07,719 | INFO     | all job control threads have been joined
[2026-01-13 02:50:10] 2026-01-13 07:49:07,821 | INFO     | all payload control threads have been joined
[2026-01-13 02:50:10] 2026-01-13 07:49:08,278 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,278 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,283 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,343 | INFO     | [data] control thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:50:10] 2026-01-13 07:49:08,512 | INFO     | [job] validate thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,606 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,641 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,725 | INFO     | [job] control thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,786 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,813 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:08,827 | INFO     | [payload] control thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:09,247 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:09,367 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:09,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:50:10] 2026-01-13 07:49:10,493 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:10,848 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:11,446 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:50:10] 2026-01-13 07:49:38,509 | INFO     | PID=842192 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 02:50:10] 2026-01-13 07:49:38,509 | INFO     | .. there are 12 such processes running
[2026-01-13 02:50:10] 2026-01-13 07:49:38,510 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:50:10] 2026-01-13 07:49:38,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:50:10] 2026-01-13 07:49:38,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:50:10] 2026-01-13 07:50:03,855 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:50:10] 2026-01-13 07:50:05,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662274352960)>', '<ExcThread(monitor, started 139661758408448)>']
[2026-01-13 02:50:10] 2026-01-13 07:50:05,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:50:10] 2026-01-13 07:50:05,675 | INFO     | [monitor] control thread has ended
[2026-01-13 02:50:10] 2026-01-13 07:50:10,062 | INFO     | all workflow threads have been joined
[2026-01-13 02:50:10] 2026-01-13 07:50:10,062 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:50:10] 2026-01-13 07:50:10,062 | INFO     | traces error code: 0
[2026-01-13 02:50:10] 2026-01-13 07:50:10,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:50:10] 2026-01-13 07:50:10,341 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:50:10] 2026-01-13 07:50:10,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:50:10] 2026-01-13 07:50:10,373 [wrapper] pilotpid: 842192
[2026-01-13 02:50:10] 2026-01-13 07:50:10,388 [wrapper] Pilot exit status: 0
[2026-01-13 02:50:10] 2026-01-13 07:50:10,468 [wrapper] pandaids: 6967163161
[2026-01-13 02:50:10] 2026-01-13 07:50:10,586 [wrapper] cleanup supervisor_pilot 1346562 842193
[2026-01-13 02:50:10] 2026-01-13 07:50:10,589 [wrapper] Test setup, not cleaning
[2026-01-13 02:50:10] 2026-01-13 07:50:10,592 [wrapper] apfmon messages muted
[2026-01-13 02:50:10] 2026-01-13 07:50:10,608 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:50:10] 2026-01-13 07:50:10,680 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:50:10]  *** Error codes and diagnostics ***
[2026-01-13 02:50:10]     "exeErrorCode": 0,
[2026-01-13 02:50:10]     "exeErrorDiag": "",
[2026-01-13 02:50:10]     "pilotErrorCode": 0,
[2026-01-13 02:50:10]     "pilotErrorDiag": "",
[2026-01-13 02:50:10]  *** Listing of results directory ***
[2026-01-13 02:50:11] total 555932
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 11:03 pilot3.tar.gz
[2026-01-13 02:50:11] -rwx------. 1 boincer umatlas     36322 Jan 12 11:06 runpilot2-wrapper.sh
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 11:06 queuedata.json
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas       100 Jan 12 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:50:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 23:03 run_atlas
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas       105 Jan 12 23:03 job.xml
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas 311359945 Jan 12 23:03 EVNT.48188646._000010.pool.root.1
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 23:03 start_atlas.sh
[2026-01-13 02:50:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 23:03 shared
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 23:03 input.tar.gz
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas         0 Jan 12 23:03 boinc_lockfile
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas      2623 Jan 12 23:03 pandaJob.out
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas        57 Jan 12 23:03 setup.sh.local
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas    987763 Jan 12 23:03 agis_schedconf.cvmfs.json
[2026-01-13 02:50:11] drwx------. 5 boincer umatlas      4096 Jan 12 23:03 pilot3
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas      6841 Jan 13 02:46 init_data.xml
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas 249388616 Jan 13 02:47 HITS.48188648._000058.pool.root.1
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas       530 Jan 13 02:48 boinc_task_state.xml
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas      1034 Jan 13 02:48 memory_monitor_summary.json
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas   1516240 Jan 13 02:48 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas    483212 Jan 13 02:48 log.48188648._000058.job.log.tgz.1
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas        95 Jan 13 02:48 pilot_heartbeat.json
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas      7808 Jan 13 02:49 heartbeat.json
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas      4823 Jan 13 02:50 pilotlog.txt
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas        27 Jan 13 02:50 wrapper_checkpoint.txt
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 13 02:50 boinc_mmap_file
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas   1823506 Jan 13 02:50 log.48188648._000058.job.log.1
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas       357 Jan 13 02:50 output.list
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas       620 Jan 13 02:50 runtime_log
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas   2324480 Jan 13 02:50 result.tar.gz
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas      9343 Jan 13 02:50 runtime_log.err
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas       656 Jan 13 02:50 NvQODmGcZz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlinKDmx83rTn.diag
[2026-01-13 02:50:11] -rw-r--r--. 1 boincer umatlas     21388 Jan 13 02:50 stderr.txt
[2026-01-13 02:50:11] HITS file was successfully produced:
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas 249388616 Jan 13 02:47 shared/HITS.pool.root.1
[2026-01-13 02:50:11]  *** Contents of shared directory: ***
[2026-01-13 02:50:11] total 550480
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas 311359945 Jan 12 23:03 ATLAS.root_0
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 23:03 start_atlas.sh
[2026-01-13 02:50:11] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 23:03 input.tar.gz
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas 249388616 Jan 13 02:47 HITS.pool.root.1
[2026-01-13 02:50:11] -rw-------. 1 boincer umatlas   2324480 Jan 13 02:50 result.tar.gz
02:50:32 (837889): run_atlas exited; CPU time 49262.187361
02:50:32 (837889): called boinc_finish(0)

</stderr_txt>
]]>

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