Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:04:55 (236206): wrapper (7.7.26015): starting
02:04:55 (236206): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 02:04:55] Arguments: --nthreads 4
[2026-01-13 02:04:55] Threads: 4
[2026-01-13 02:04:55] Checking for CVMFS
[2026-01-13 02:04:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 02:04:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 02:04:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 02:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 02:04:55] 2.9.2.0 14824 709 71696 155071 3 57 27571815 36864001 0 130560 0 381574 99.984 26128 20869 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-13 02:04:55] CVMFS is ok
[2026-01-13 02:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 02:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 02:04:55] Further information can be found at the LHC@home message board.
[2026-01-13 02:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 02:04:55] Checking for apptainer binary...
[2026-01-13 02:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 02:04:55] Running /usr/bin/apptainer --version
[2026-01-13 02:04:55] apptainer version 1.4.1-1.1
[2026-01-13 02:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 02:04:55] atlasA237
[2026-01-13 02:04:55] apptainer works
[2026-01-13 02:04:56] Set ATHENA_PROC_NUMBER=4
[2026-01-13 02:04:56] Set ATHENA_CORE_NUMBER=4
[2026-01-13 02:04:56] Starting ATLAS job with PandaID=6967163151
[2026-01-13 02:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:35:17]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:35:17] 2026-01-13 02:34:47,721 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:47,721 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:47,939 | INFO     | [job] control thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,041 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:35:17] 2026-01-13 02:34:48,115 | INFO     | all payload control threads have been joined
[2026-01-13 03:35:17] 2026-01-13 02:34:48,341 | INFO     | [data] control thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,522 | INFO     | [job] validate thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,537 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,552 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,616 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,704 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,721 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,939 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:48,979 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:49,121 | INFO     | [payload] control thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:52,123 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:34:57,148 | INFO     | job.realtimelogging is not enabled
[2026-01-13 03:35:17] 2026-01-13 02:34:58,153 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:35:17] 2026-01-13 02:35:02,046 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-13 03:35:17] 2026-01-13 02:35:09,763 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:35:17] 2026-01-13 02:35:10,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944641378112)>', '<ExcThread(monitor, started 139943825356544)>']
[2026-01-13 03:35:17] 2026-01-13 02:35:15,795 | INFO     | all workflow threads have been joined
[2026-01-13 03:35:17] 2026-01-13 02:35:15,795 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:35:17] 2026-01-13 02:35:15,796 | INFO     | traces error code: 0
[2026-01-13 03:35:17] 2026-01-13 02:35:15,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | INFO     | PID=240011 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:35:17] 2026-01-13 02:35:17,187 | INFO     | [monitor] control thread has ended
[2026-01-13 03:35:17] 2026-01-13 02:35:17,254 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:35:17] 2026-01-13 02:35:17,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:35:17] 2026-01-13 02:35:17,262 [wrapper] pilotpid: 240011
[2026-01-13 03:35:17] 2026-01-13 02:35:17,266 [wrapper] Pilot exit status: 0
[2026-01-13 03:35:17] 2026-01-13 02:35:17,276 [wrapper] pandaids: 6967163151
[2026-01-13 03:35:17] 2026-01-13 02:35:17,302 [wrapper] cleanup supervisor_pilot  267530 240012
[2026-01-13 03:35:17] 2026-01-13 02:35:17,306 [wrapper] Test setup, not cleaning
[2026-01-13 03:35:17] 2026-01-13 02:35:17,310 [wrapper] apfmon messages muted
[2026-01-13 03:35:17] 2026-01-13 02:35:17,313 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:35:17] 2026-01-13 02:35:17,317 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:35:17]  *** Error codes and diagnostics ***
[2026-01-13 03:35:17]     "exeErrorCode": 0,
[2026-01-13 03:35:17]     "exeErrorDiag": "",
[2026-01-13 03:35:17]     "pilotErrorCode": 0,
[2026-01-13 03:35:17]     "pilotErrorDiag": "",
[2026-01-13 03:35:17]  *** Listing of results directory ***
[2026-01-13 03:35:17] total 560892
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc    579449 Jan 12 17:03 pilot3.tar.gz
[2026-01-13 03:35:17] -rwx------ 1 boinc boinc     36322 Jan 12 17:06 runpilot2-wrapper.sh
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      5112 Jan 12 17:06 queuedata.json
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc       100 Jan 13 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:35:17] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 02:04 run_atlas
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc       105 Jan 13 02:04 job.xml
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc 313799512 Jan 13 02:04 EVNT.48188646._000009.pool.root.1
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc    592405 Jan 13 02:04 input.tar.gz
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc     15847 Jan 13 02:04 start_atlas.sh
[2026-01-13 03:35:17] drwxrwx--x 2 boinc boinc      4096 Jan 13 02:04 shared
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc         0 Jan 13 02:04 boinc_setup_complete
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      6371 Jan 13 02:04 init_data.xml
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc         0 Jan 13 02:04 boinc_lockfile
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      2623 Jan 13 02:04 pandaJob.out
[2026-01-13 03:35:17] -rw------- 1 boinc boinc    987763 Jan 13 02:05 agis_schedconf.cvmfs.json
[2026-01-13 03:35:17] -rw------- 1 boinc boinc   1516240 Jan 13 02:05 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:35:17] drwx------ 5 boinc boinc      4096 Jan 13 02:05 pilot3
[2026-01-13 03:35:17] -rw------- 1 boinc boinc 254443557 Jan 13 03:34 HITS.48188648._000048.pool.root.1
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc       529 Jan 13 03:34 boinc_task_state.xml
[2026-01-13 03:35:17] -rw------- 1 boinc boinc      1021 Jan 13 03:34 memory_monitor_summary.json
[2026-01-13 03:35:17] -rw------- 1 boinc boinc    324648 Jan 13 03:34 log.48188648._000048.job.log.tgz.1
[2026-01-13 03:35:17] -rw------- 1 boinc boinc        95 Jan 13 03:34 pilot_heartbeat.json
[2026-01-13 03:35:17] -rw------- 1 boinc boinc      7752 Jan 13 03:34 heartbeat.json
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      8192 Jan 13 03:34 boinc_mmap_file
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc        27 Jan 13 03:34 wrapper_checkpoint.txt
[2026-01-13 03:35:17] -rw------- 1 boinc boinc       746 Jan 13 03:35 pilotlog.txt
[2026-01-13 03:35:17] -rw------- 1 boinc boinc    781986 Jan 13 03:35 log.48188648._000048.job.log.1
[2026-01-13 03:35:17] -rw------- 1 boinc boinc       357 Jan 13 03:35 output.list
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc       620 Jan 13 03:35 runtime_log
[2026-01-13 03:35:17] -rw------- 1 boinc boinc   1126400 Jan 13 03:35 result.tar.gz
[2026-01-13 03:35:17] -rw------- 1 boinc boinc       661 Jan 13 03:35 xQ7NDmGcZz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdinKDmhG6fFo.diag
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      8912 Jan 13 03:35 runtime_log.err
[2026-01-13 03:35:17] -rw-r--r-- 1 boinc boinc      6725 Jan 13 03:35 stderr.txt
[2026-01-13 03:35:17] HITS file was successfully produced:
[2026-01-13 03:35:17] -rw------- 1 boinc boinc 254443557 Jan 13 03:34 shared/HITS.pool.root.1
[2026-01-13 03:35:17]  *** Contents of shared directory: ***
[2026-01-13 03:35:17] total 556636
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc 313799512 Jan 13 02:04 ATLAS.root_0
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc    592405 Jan 13 02:04 input.tar.gz
[2026-01-13 03:35:17] -rw-r--r-- 2 boinc boinc     15847 Jan 13 02:04 start_atlas.sh
[2026-01-13 03:35:17] -rw------- 1 boinc boinc 254443557 Jan 13 03:34 HITS.pool.root.1
[2026-01-13 03:35:17] -rw------- 1 boinc boinc   1126400 Jan 13 03:35 result.tar.gz
03:35:19 (236206): run_atlas exited; CPU time 20395.765700
03:35:19 (236206): called boinc_finish(0)

</stderr_txt>
]]>

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