Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:36 (813279): wrapper (7.7.26015): starting
13:02:36 (813279): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 13:02:36] Arguments: --nthreads 8
[2026-01-12 13:02:36] Threads: 8
[2026-01-12 13:02:36] Checking for CVMFS
[2026-01-12 13:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 13:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 13:02:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 13:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 13:02:38] 2.13.3.0 11958 27530 201896 155061 0 418 37444918 40960000 19362 16776704 0 40758409 99.739 29524558 40335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 13:02:38] CVMFS is ok
[2026-01-12 13:02:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 13:02:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 13:02:38] Further information can be found at the LHC@home message board.
[2026-01-12 13:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 13:02:38] Checking for apptainer binary...
[2026-01-12 13:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 13:02:38] Running /usr/bin/apptainer --version
[2026-01-12 13:02:38] apptainer version 1.4.5-2.el9
[2026-01-12 13:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 13:02:38] c-212-1.aglt2.org
[2026-01-12 13:02:38] apptainer works
[2026-01-12 13:02:38] Set ATHENA_PROC_NUMBER=8
[2026-01-12 13:02:38] Set ATHENA_CORE_NUMBER=8
[2026-01-12 13:02:38] Starting ATLAS job with PandaID=6967111529
[2026-01-12 13:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 14:00:20]  *** The last 200 lines of the pilot log: ***
[2026-01-12 14:00:20] 2026-01-12 18:58:57,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:58:59,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 14:00:20] 2026-01-12 18:58:59,581 | INFO     | time since job start (3351s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:58:59,831 | INFO     | job 6967111529 has state=finished
[2026-01-12 14:00:20] 2026-01-12 18:58:59,831 | INFO     | preparing for final server update for job 6967111529 in state='finished'
[2026-01-12 14:00:20] 2026-01-12 18:58:59,832 | INFO     | this job has now completed (state=finished)
[2026-01-12 14:00:20] 2026-01-12 18:58:59,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 14:00:20] 2026-01-12 18:58:59,832 | INFO     | log transfer has been attempted: DONE
[2026-01-12 14:00:20] 2026-01-12 18:58:59,832 | INFO     | job 6967111529 has finished - writing final server update
[2026-01-12 14:00:20] 2026-01-12 18:58:59,832 | INFO     | total number of processed events: 50 (read)
[2026-01-12 14:00:20] 2026-01-12 18:58:59,834 | INFO     | executing command: lscpu
[2026-01-12 14:00:20] 2026-01-12 18:59:00,068 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 14:00:20] 2026-01-12 18:59:00,444 | INFO     | monitor loop #217: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:00,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:01,587 | INFO     | time since job start (3353s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:02,949 | INFO     | monitor loop #218: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:02,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:03,593 | INFO     | time since job start (3355s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:05,456 | INFO     | monitor loop #219: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:05,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:05,612 | INFO     | time since job start (3357s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:07,626 | INFO     | time since job start (3359s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:07,961 | INFO     | monitor loop #220: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:07,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:09,638 | INFO     | time since job start (3361s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:10,470 | INFO     | monitor loop #221: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:10,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:11,656 | INFO     | time since job start (3363s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:13,003 | INFO     | monitor loop #222: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:13,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:13,419 | INFO     | PID=818035 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 14:00:20] 2026-01-12 18:59:13,419 | INFO     | .. there are 17 such processes running
[2026-01-12 14:00:20] 2026-01-12 18:59:14,422 | INFO     | time since job start (3366s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:15,531 | INFO     | monitor loop #223: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:15,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:16,429 | INFO     | time since job start (3368s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,036 | INFO     | monitor loop #224: job 0:6967111529 is in state 'finished'
[2026-01-12 14:00:20] 2026-01-12 18:59:18,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,295 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 14:00:20] 2026-01-12 18:59:18,321 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3245.2764895833357
[2026-01-12 14:00:20] 2026-01-12 18:59:18,333 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6967111529/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,334 | INFO     | extracted standard info from prmon json
[2026-01-12 14:00:20] 2026-01-12 18:59:18,334 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 14:00:20] 2026-01-12 18:59:18,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | fitting pss+swap vs Time
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | sum of square deviations: 34286716.47916672
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | sum of deviations: 384682409.31249475
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | mean x: 1768242770.2291667
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | mean y: 2383423.0625
[2026-01-12 14:00:20] 2026-01-12 18:59:18,336 | INFO     | intersect: -19836550104.283756
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | chi2: 3.0168371243016505
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | current memory leak: 11.22 B/s (using 48 data points, chi2=3.02)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | could have reported an average CPU frequency of 3243 MHz (5 samples)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | ..............................
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . Timing measurements:
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . get job = 0 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . initial setup = 5 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . payload setup = 12 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . stage-in = 0 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . payload execution = 3309 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . stage-out = 1 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,337 | INFO     | . log creation = 0 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,338 | INFO     | ..............................
[2026-01-12 14:00:20] 2026-01-12 18:59:18,434 | INFO     | time since job start (3370s) is within the limit (349056.0s)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,588 | INFO     | 
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | job summary report
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | --------------------------------------------------
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | PanDA job id: 6967111529
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | task id: 47962010
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | errors: (none)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | pilot state: finished 
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | transexitcode: 0
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | exeerrorcode: 0
[2026-01-12 14:00:20] 2026-01-12 18:59:18,591 | INFO     | exeerrordiag: 
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | exitcode: 0
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | exitmsg: OK
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | cpuconsumptiontime: 11520 s
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | nevents: 50
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | neventsw: 0
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | pid: 825131
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | pgrp: 825131
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | corecount: 8
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | event service: False
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | sizes: {0: 2284399, 1: 2284598, 11: 2284888, 3323: 2309883, 3324: 2318877, 3328: 2318933, 3347: 2319339}
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | --------------------------------------------------
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | 
[2026-01-12 14:00:20] 2026-01-12 18:59:18,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 14:00:20] 2026-01-12 18:59:18,794 | INFO     | job 6967111529 has completed (purged errors)
[2026-01-12 14:00:20] 2026-01-12 18:59:18,795 | INFO     | overall cleanup function is called
[2026-01-12 14:00:20] 2026-01-12 18:59:19,851 | INFO     | --- collectZombieJob: --- 10, [825131]
[2026-01-12 14:00:20] 2026-01-12 18:59:19,851 | INFO     | zombie collector waiting for pid 825131
[2026-01-12 14:00:20] 2026-01-12 18:59:19,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 14:00:20] 2026-01-12 18:59:19,851 | INFO     | collected zombie processes
[2026-01-12 14:00:20] 2026-01-12 18:59:19,851 | INFO     | will attempt to kill all subprocesses of pid=825131
[2026-01-12 14:00:20] 2026-01-12 18:59:20,829 | INFO     | process IDs to be killed: [825131] (in reverse order)
[2026-01-12 14:00:20] 2026-01-12 18:59:21,181 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 14:00:20] 2026-01-12 18:59:21,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 14:00:20] 2026-01-12 18:59:21,254 | INFO     | did not find any defunct processes belonging to 825131
[2026-01-12 14:00:20] 2026-01-12 18:59:21,349 | INFO     | did not find any defunct processes belonging to 825131
[2026-01-12 14:00:20] 2026-01-12 18:59:21,349 | INFO     | ready for new job
[2026-01-12 14:00:20] 2026-01-12 18:59:21,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 14:00:20] 2026-01-12 18:59:21,351 | INFO     | ***************************************
[2026-01-12 14:00:20] 2026-01-12 18:59:21,352 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 14:00:20] 2026-01-12 18:59:21,352 | INFO     | ***************************************
[2026-01-12 14:00:20] 2026-01-12 18:59:21,352 | INFO     | 
[2026-01-12 14:00:20] 2026-01-12 18:59:21,364 | INFO     | architecture information:
[2026-01-12 14:00:20] 2026-01-12 18:59:21,376 | INFO     | executing command: cat /etc/os-release
[2026-01-12 14:00:20] 2026-01-12 18:59:21,493 | INFO     | cat /etc/os-release:
[2026-01-12 14:00:20] NAME="CentOS Linux"
[2026-01-12 14:00:20] VERSION="7 (Core)"
[2026-01-12 14:00:20] ID="centos"
[2026-01-12 14:00:20] ID_LIKE="rhel fedora"
[2026-01-12 14:00:20] VERSION_ID="7"
[2026-01-12 14:00:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 14:00:20] ANSI_COLOR="0;31"
[2026-01-12 14:00:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 14:00:20] HOME_URL="https://www.centos.org/"
[2026-01-12 14:00:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 14:00:20] 
[2026-01-12 14:00:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 14:00:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 14:00:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 14:00:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 14:00:20] 
[2026-01-12 14:00:20] 2026-01-12 18:59:21,494 | INFO     | ***************************************
[2026-01-12 14:00:20] 2026-01-12 18:59:21,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-12 14:00:20] 2026-01-12 18:59:22,017 | INFO     | sufficient remaining disk space (124624306176 B)
[2026-01-12 14:00:20] 2026-01-12 18:59:22,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 14:00:20] 2026-01-12 18:59:22,018 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 14:00:20] 2026-01-12 18:59:22,018 | INFO     | update_server=False
[2026-01-12 14:00:20] 2026-01-12 18:59:22,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 14:00:20] 2026-01-12 18:59:22,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 14:00:20] 2026-01-12 18:59:22,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:00:20] 2026-01-12 18:59:22,019 | INFO     | aborting loop
[2026-01-12 14:00:20] 2026-01-12 18:59:22,067 | INFO     | all data control threads have been joined
[2026-01-12 14:00:20] 2026-01-12 18:59:23,025 | INFO     | [job] job monitor thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,026 | INFO     | [job] retrieve thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,051 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,074 | INFO     | [data] control thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,285 | INFO     | all payload control threads have been joined
[2026-01-12 14:00:20] 2026-01-12 18:59:23,417 | INFO     | all job control threads have been joined
[2026-01-12 14:00:20] 2026-01-12 18:59:23,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:00:20] 2026-01-12 18:59:23,476 | INFO     | [payload] failed_post thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 14:00:20] 2026-01-12 18:59:23,746 | INFO     | [job] validate thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:23,968 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,032 | INFO     | [data] copytool_out thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,250 | INFO     | [data] copytool_in thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,291 | INFO     | [payload] control thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,423 | INFO     | [job] control thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,433 | INFO     | [job] queue monitor thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:24,511 | INFO     | [payload] validate_post thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:27,650 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:32,827 | INFO     | job.realtimelogging is not enabled
[2026-01-12 14:00:20] 2026-01-12 18:59:33,833 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 14:00:20] 2026-01-12 18:59:52,013 | INFO     | PID=818035 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 14:00:20] 2026-01-12 18:59:52,013 | INFO     | .. there are 18 such processes running
[2026-01-12 14:00:20] 2026-01-12 18:59:52,014 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 14:00:20] 2026-01-12 18:59:52,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 14:00:20] 2026-01-12 18:59:52,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 14:00:20] 2026-01-12 19:00:13,835 | INFO     | [monitor] cgroup control has ended
[2026-01-12 14:00:20] 2026-01-12 19:00:14,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859622950720)>', '<ExcThread(monitor, started 139859092039424)>']
[2026-01-12 14:00:20] 2026-01-12 19:00:15,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 14:00:20] 2026-01-12 19:00:15,181 | INFO     | [monitor] control thread has ended
[2026-01-12 14:00:20] 2026-01-12 19:00:19,694 | INFO     | all workflow threads have been joined
[2026-01-12 14:00:20] 2026-01-12 19:00:19,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 14:00:20] 2026-01-12 19:00:19,694 | INFO     | traces error code: 0
[2026-01-12 14:00:20] 2026-01-12 19:00:19,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 14:00:20] 2026-01-12 19:00:20,260 [wrapper] ==== pilot stdout END ====
[2026-01-12 14:00:20] 2026-01-12 19:00:20,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 14:00:20] 2026-01-12 19:00:20,268 [wrapper] pilotpid: 818035
[2026-01-12 14:00:20] 2026-01-12 19:00:20,271 [wrapper] Pilot exit status: 0
[2026-01-12 14:00:20] 2026-01-12 19:00:20,288 [wrapper] pandaids: 6967111529
[2026-01-12 14:00:20] 2026-01-12 19:00:20,355 [wrapper] cleanup supervisor_pilot  908376 818036
[2026-01-12 14:00:20] 2026-01-12 19:00:20,361 [wrapper] Test setup, not cleaning
[2026-01-12 14:00:20] 2026-01-12 19:00:20,364 [wrapper] apfmon messages muted
[2026-01-12 14:00:20] 2026-01-12 19:00:20,370 [wrapper] ==== wrapper stdout END ====
[2026-01-12 14:00:20] 2026-01-12 19:00:20,420 [wrapper] ==== wrapper stderr END ====
[2026-01-12 14:00:20]  *** Error codes and diagnostics ***
[2026-01-12 14:00:20]     "exeErrorCode": 0,
[2026-01-12 14:00:20]     "exeErrorDiag": "",
[2026-01-12 14:00:20]     "pilotErrorCode": 0,
[2026-01-12 14:00:20]     "pilotErrorDiag": "",
[2026-01-12 14:00:20]  *** Listing of results directory ***
[2026-01-12 14:00:20] total 434796
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 09:17 pilot3.tar.gz
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 09:49 queuedata.json
[2026-01-12 14:00:20] -rwx------. 1 boincer umatlas     36322 Jan 12 09:52 runpilot2-wrapper.sh
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas       100 Jan 12 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 14:00:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 13:02 run_atlas
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas       105 Jan 12 13:02 job.xml
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas 392858194 Jan 12 13:02 EVNT.47962006._000114.pool.root.1
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas    592614 Jan 12 13:02 input.tar.gz
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 13:02 start_atlas.sh
[2026-01-12 14:00:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 13:02 shared
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas         0 Jan 12 13:02 boinc_lockfile
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas      2890 Jan 12 13:02 pandaJob.out
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas        57 Jan 12 13:02 setup.sh.local
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas    988539 Jan 12 13:03 agis_schedconf.cvmfs.json
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas   1516240 Jan 12 13:03 agis_ddmendpoints.agis.ALL.json
[2026-01-12 14:00:20] drwx------. 5 boincer umatlas      4096 Jan 12 13:03 pilot3
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas       530 Jan 12 13:50 boinc_task_state.xml
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas      6953 Jan 12 13:56 init_data.xml
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas  45140035 Jan 12 13:58 HITS.47962010._003231.pool.root.1
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas      1032 Jan 12 13:58 memory_monitor_summary.json
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas   1181465 Jan 12 13:58 log.47962010._003231.job.log.tgz.1
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas        95 Jan 12 13:58 pilot_heartbeat.json
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas      7873 Jan 12 13:59 heartbeat.json
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 14:00 boinc_mmap_file
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas        27 Jan 12 14:00 wrapper_checkpoint.txt
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas      4896 Jan 12 14:00 pilotlog.txt
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas    482434 Jan 12 14:00 log.47962010._003231.job.log.1
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas       353 Jan 12 14:00 output.list
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas       620 Jan 12 14:00 runtime_log
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas   1679360 Jan 12 14:00 result.tar.gz
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas      9337 Jan 12 14:00 runtime_log.err
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas       651 Jan 12 14:00 Ga3NDmBSYz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnhnKDmOfkuRo.diag
[2026-01-12 14:00:20] -rw-r--r--. 1 boincer umatlas     22363 Jan 12 14:00 stderr.txt
[2026-01-12 14:00:20] HITS file was successfully produced:
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas 45140035 Jan 12 13:58 shared/HITS.pool.root.1
[2026-01-12 14:00:20]  *** Contents of shared directory: ***
[2026-01-12 14:00:20] total 429972
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas 392858194 Jan 12 13:02 ATLAS.root_0
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas    592614 Jan 12 13:02 input.tar.gz
[2026-01-12 14:00:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 13:02 start_atlas.sh
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas  45140035 Jan 12 13:58 HITS.pool.root.1
[2026-01-12 14:00:20] -rw-------. 1 boincer umatlas   1679360 Jan 12 14:00 result.tar.gz
14:00:22 (813279): run_atlas exited; CPU time 11565.050063
14:00:22 (813279): called boinc_finish(0)

</stderr_txt>
]]>

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