Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:52 (2615613): wrapper (7.7.26015): starting
03:38:52 (2615613): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 03:38:52] Arguments: --nthreads 4
[2026-01-13 03:38:52] Threads: 4
[2026-01-13 03:38:52] Checking for CVMFS
[2026-01-13 03:38:52] No cvmfs_config command found, will try listing directly
[2026-01-13 03:38:52] CVMFS is ok
[2026-01-13 03:38:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 03:38:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 03:38:52] Further information can be found at the LHC@home message board.
[2026-01-13 03:38:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 03:38:52] Checking for apptainer binary...
[2026-01-13 03:38:52] which: no apptainer in ((null))
[2026-01-13 03:38:52] apptainer is not installed, using version from CVMFS
[2026-01-13 03:38:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 03:38:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-13 03:38:52] apptainer works
[2026-01-13 03:38:52] Set ATHENA_PROC_NUMBER=4
[2026-01-13 03:38:52] Set ATHENA_CORE_NUMBER=4
[2026-01-13 03:38:52] Starting ATLAS job with PandaID=6966979392
[2026-01-13 03:38:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 06:26:12]  *** The last 200 lines of the pilot log: ***
[2026-01-13 06:26:12] 2026-01-13 04:34:17,083 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 06:26:12] 2026-01-13 04:34:17,595 | INFO     | time since job start (6913s) is within the limit (349056.0s)
[2026-01-13 06:26:12] 2026-01-13 04:34:18,474 | INFO     | monitor loop #483: job 0:6966979392 is in state 'finished'
[2026-01-13 06:26:12] 2026-01-13 04:34:18,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 06:26:12] 2026-01-13 04:34:19,601 | INFO     | time since job start (6915s) is within the limit (349056.0s)
[2026-01-13 06:26:12] 2026-01-13 04:34:20,977 | INFO     | monitor loop #484: job 0:6966979392 is in state 'finished'
[2026-01-13 06:26:12] 2026-01-13 04:34:20,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 06:26:12] 2026-01-13 04:34:21,607 | INFO     | time since job start (6917s) is within the limit (349056.0s)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,550 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 06:26:12] 2026-01-13 04:34:22,569 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2732.3147031249996
[2026-01-13 06:26:12] 2026-01-13 04:34:22,592 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979392/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,593 | INFO     | extracted standard info from prmon json
[2026-01-13 06:26:12] 2026-01-13 04:34:22,593 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 06:26:12] 2026-01-13 04:34:22,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 06:26:12] 2026-01-13 04:34:22,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 06:26:12] 2026-01-13 04:34:22,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 06:26:12] 2026-01-13 04:34:22,596 | INFO     | fitting pss+swap vs Time
[2026-01-13 06:26:12] 2026-01-13 04:34:22,596 | INFO     | sum of square deviations: 447383272.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,597 | INFO     | sum of deviations: 101350584.9999986
[2026-01-13 06:26:12] 2026-01-13 04:34:22,597 | INFO     | mean x: 1768275393.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,597 | INFO     | mean y: 2375387.7522123894
[2026-01-13 06:26:12] 2026-01-13 04:34:22,597 | INFO     | intersect: -398211216.0349145
[2026-01-13 06:26:12] 2026-01-13 04:34:22,597 | INFO     | chi2: 1.406515386057754
[2026-01-13 06:26:12] 2026-01-13 04:34:22,598 | INFO     | sum of square deviations: 390582207.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,598 | INFO     | sum of deviations: 358402267.00000006
[2026-01-13 06:26:12] 2026-01-13 04:34:22,598 | INFO     | mean x: 1768275240.5
[2026-01-13 06:26:12] 2026-01-13 04:34:22,598 | INFO     | mean y: 2376078.1296296297
[2026-01-13 06:26:12] 2026-01-13 04:34:22,598 | INFO     | intersect: -1620211544.9547224
[2026-01-13 06:26:12] 2026-01-13 04:34:22,599 | INFO     | chi2: 1.4079274968990163
[2026-01-13 06:26:12] 2026-01-13 04:34:22,599 | INFO     | current chi2=1.4079274968990163 (change=-0.10039782395984227 %)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,599 | INFO     | right removable region: 107
[2026-01-13 06:26:12] 2026-01-13 04:34:22,599 | INFO     | sum of square deviations: 390582207.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | sum of deviations: -12897961451.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | mean x: 1768275545.5
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | mean y: 2409313.9444444445
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | intersect: 58395109779.70067
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | chi2: 0.06907411860456177
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | current chi2=0.06907411860456177 (change=95.08898947787794 %)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,600 | INFO     | sum of square deviations: 338804492.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,601 | INFO     | sum of deviations: -10916334971.000002
[2026-01-13 06:26:12] 2026-01-13 04:34:22,601 | INFO     | mean x: 1768275698.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,601 | INFO     | mean y: 2403461.0776699027
[2026-01-13 06:26:12] 2026-01-13 04:34:22,601 | INFO     | intersect: 56976529531.53967
[2026-01-13 06:26:12] 2026-01-13 04:34:22,601 | INFO     | chi2: 0.06868543216055516
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | current chi2=0.06868543216055516 (change=0.5627092344554926 %)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | left removable region: 20
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | sum of square deviations: 204163828.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | sum of deviations: -5903986077.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | mean x: 1768275820.0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,602 | INFO     | mean y: 2389773.425287356
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | intersect: 51137186391.63798
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | chi2: 0.05962979271615675
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | current memory leak: -28.92 B/s (using 87 data points, chi2=0.06)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | could have reported an average CPU frequency of 2725 MHz (7 samples)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | ..............................
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | . Timing measurements:
[2026-01-13 06:26:12] 2026-01-13 04:34:22,603 | INFO     | . get job = 0 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . initial setup = 1 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . payload setup = 8 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . stage-in = 0 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . payload execution = 6880 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . stage-out = 0 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | . log creation = 0 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,604 | INFO     | ..............................
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | 
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | job summary report
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | --------------------------------------------------
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | PanDA job id: 6966979392
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | task id: 48188456
[2026-01-13 06:26:12] 2026-01-13 04:34:22,697 | INFO     | errors: (none)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | pilot state: finished 
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | transexitcode: 0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | exeerrorcode: 0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | exeerrordiag: 
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | exitcode: 0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | exitmsg: OK
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | cpuconsumptiontime: 26358 s
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | nevents: 400
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | neventsw: 0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,698 | INFO     | pid: 2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | pgrp: 2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | corecount: 4
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | event service: False
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | sizes: {0: 2283952, 1: 2284151, 7: 2284413, 12: 2284441, 6892: 2311852, 6893: 2321058, 6900: 2321196}
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | --------------------------------------------------
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | 
[2026-01-13 06:26:12] 2026-01-13 04:34:22,699 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,734 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,734 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 06:26:12] 2026-01-13 04:34:22,734 | INFO     | job 6966979392 has completed (purged errors)
[2026-01-13 06:26:12] 2026-01-13 04:34:22,734 | INFO     | overall cleanup function is called
[2026-01-13 06:26:12] 2026-01-13 04:34:23,743 | INFO     | --- collectZombieJob: --- 10, [2641370]
[2026-01-13 06:26:12] 2026-01-13 04:34:23,743 | INFO     | zombie collector waiting for pid 2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:23,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 06:26:12] 2026-01-13 04:34:23,743 | INFO     | collected zombie processes
[2026-01-13 06:26:12] 2026-01-13 04:34:23,743 | INFO     | will attempt to kill all subprocesses of pid=2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:24,414 | INFO     | process IDs to be killed: [2641370] (in reverse order)
[2026-01-13 06:26:12] 2026-01-13 04:34:24,639 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 06:26:12] 2026-01-13 04:34:24,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 06:26:12] 2026-01-13 04:34:24,669 | INFO     | did not find any defunct processes belonging to 2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:24,693 | INFO     | did not find any defunct processes belonging to 2641370
[2026-01-13 06:26:12] 2026-01-13 04:34:24,693 | INFO     | ready for new job
[2026-01-13 06:26:12] 2026-01-13 04:34:24,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 06:26:12] 2026-01-13 04:34:24,695 | INFO     | ***************************************
[2026-01-13 06:26:12] 2026-01-13 04:34:24,695 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 06:26:12] 2026-01-13 04:34:24,695 | INFO     | ***************************************
[2026-01-13 06:26:12] 2026-01-13 04:34:24,695 | INFO     | 
[2026-01-13 06:26:12] 2026-01-13 04:34:24,703 | INFO     | architecture information:
[2026-01-13 06:26:12] 2026-01-13 04:34:24,704 | INFO     | executing command: cat /etc/os-release
[2026-01-13 06:26:12] 2026-01-13 04:34:24,728 | INFO     | cat /etc/os-release:
[2026-01-13 06:26:12] NAME="CentOS Linux"
[2026-01-13 06:26:12] VERSION="7 (Core)"
[2026-01-13 06:26:12] ID="centos"
[2026-01-13 06:26:12] ID_LIKE="rhel fedora"
[2026-01-13 06:26:12] VERSION_ID="7"
[2026-01-13 06:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 06:26:12] ANSI_COLOR="0;31"
[2026-01-13 06:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 06:26:12] HOME_URL="https://www.centos.org/"
[2026-01-13 06:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 06:26:12] 
[2026-01-13 06:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 06:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 06:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 06:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 06:26:12] 
[2026-01-13 06:26:12] 2026-01-13 04:34:24,728 | INFO     | ***************************************
[2026-01-13 06:26:12] 2026-01-13 04:34:25,231 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-13 06:26:12] 2026-01-13 04:34:25,255 | INFO     | sufficient remaining disk space (3370529062912 B)
[2026-01-13 06:26:12] 2026-01-13 04:34:25,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 06:26:12] 2026-01-13 04:34:25,256 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 06:26:12] 2026-01-13 04:34:25,256 | INFO     | update_server=False
[2026-01-13 06:26:12] 2026-01-13 04:34:25,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 06:26:12] 2026-01-13 04:34:25,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 06:26:12] 2026-01-13 04:34:25,257 | INFO     | aborting loop
[2026-01-13 06:26:12] 2026-01-13 04:34:25,327 | INFO     | all data control threads have been joined
[2026-01-13 06:26:12] 2026-01-13 04:34:25,334 | INFO     | all payload control threads have been joined
[2026-01-13 06:26:12] 2026-01-13 04:34:26,128 | INFO     | all job control threads have been joined
[2026-01-13 06:26:12] 2026-01-13 04:34:26,261 | INFO     | [job] retrieve thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,262 | INFO     | [job] job monitor thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 06:26:12] 2026-01-13 04:34:26,331 | INFO     | [data] control thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,340 | INFO     | [payload] control thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 06:26:12] 2026-01-13 04:34:26,486 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:26,685 | INFO     | [payload] failed_post thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,095 | INFO     | [data] copytool_in thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,133 | INFO     | [job] control thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,144 | INFO     | [payload] validate_post thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,383 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,515 | INFO     | [job] validate thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:27,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 06:26:12] 2026-01-13 04:34:28,330 | INFO     | [data] copytool_out thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:28,709 | INFO     | [job] queue monitor thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:30,430 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:35,890 | INFO     | job.realtimelogging is not enabled
[2026-01-13 06:26:12] 2026-01-13 04:34:36,896 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 06:26:12] 2026-01-13 04:34:55,579 | INFO     | PID=2621980 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 06:26:12] 2026-01-13 04:34:55,579 | INFO     | .. there are 5 such processes running
[2026-01-13 06:26:12] 2026-01-13 04:34:55,580 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 06:26:12] 2026-01-13 04:34:55,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 06:26:12] 2026-01-13 04:34:55,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 06:26:12] 2026-01-13 04:35:14,766 | INFO     | [monitor] cgroup control has ended
[2026-01-13 06:26:12] 2026-01-13 04:35:15,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23102169802560)>', '<ExcThread(monitor, started 23101930698496)>']
[2026-01-13 06:26:12] 2026-01-13 04:35:15,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 06:26:12] 2026-01-13 04:35:15,656 | INFO     | [monitor] control thread has ended
[2026-01-13 06:26:12] 2026-01-13 04:35:20,662 | INFO     | all workflow threads have been joined
[2026-01-13 06:26:12] 2026-01-13 04:35:20,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 06:26:12] 2026-01-13 04:35:20,662 | INFO     | traces error code: 0
[2026-01-13 06:26:12] 2026-01-13 04:35:20,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 06:26:12] 2026-01-13 04:35:20,859 [wrapper] ==== pilot stdout END ====
[2026-01-13 06:26:12] 2026-01-13 04:35:20,863 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 06:26:12] 2026-01-13 04:35:20,867 [wrapper] pilotpid: 2621980
[2026-01-13 06:26:12] 2026-01-13 04:35:20,871 [wrapper] Pilot exit status: 0
[2026-01-13 06:26:12] 2026-01-13 04:35:20,885 [wrapper] pandaids: 6966979392
[2026-01-13 06:26:12] 2026-01-13 04:35:21,040 [wrapper] cleanup supervisor_pilot 2784113 2621981
[2026-01-13 06:26:12] 2026-01-13 04:35:21,044 [wrapper] Test setup, not cleaning
[2026-01-13 06:26:12] 2026-01-13 04:35:21,048 [wrapper] apfmon messages muted
[2026-01-13 06:26:12] 2026-01-13 04:35:21,052 [wrapper] ==== wrapper stdout END ====
[2026-01-13 06:26:12] 2026-01-13 04:35:21,055 [wrapper] ==== wrapper stderr END ====
[2026-01-13 06:26:12]  *** Error codes and diagnostics ***
[2026-01-13 06:26:12]     "exeErrorCode": 0,
[2026-01-13 06:26:12]     "exeErrorDiag": "",
[2026-01-13 06:26:12]     "pilotErrorCode": 0,
[2026-01-13 06:26:12]     "pilotErrorDiag": "",
[2026-01-13 06:26:12]  *** Listing of results directory ***
[2026-01-13 06:26:12] total 477220
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 06:26:12] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc       100 Jan 13 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 06:26:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 03:38 run_atlas
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc       105 Jan 13 03:38 job.xml
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc      6692 Jan 13 03:38 init_data.xml
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc 286811103 Jan 13 03:38 EVNT.48188454._000007.pool.root.1
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc    592405 Jan 13 03:38 input.tar.gz
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc     15847 Jan 13 03:38 start_atlas.sh
[2026-01-13 06:26:12] drwxrwx--x 2 boinc boinc      4096 Jan 13 03:38 shared
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc         0 Jan 13 03:38 boinc_lockfile
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc      2620 Jan 13 03:38 pandaJob.out
[2026-01-13 06:26:12] -rw------- 1 boinc boinc    987763 Jan 13 03:39 agis_schedconf.cvmfs.json
[2026-01-13 06:26:12] -rw------- 1 boinc boinc   1516240 Jan 13 03:39 agis_ddmendpoints.agis.ALL.json
[2026-01-13 06:26:12] drwx------ 5 boinc boinc      4096 Jan 13 03:39 pilot3
[2026-01-13 06:26:12] -rw------- 1 boinc boinc 195338804 Jan 13 05:33 HITS.48188456._000153.pool.root.1
[2026-01-13 06:26:12] -rw------- 1 boinc boinc        95 Jan 13 05:34 pilot_heartbeat.json
[2026-01-13 06:26:12] -rw------- 1 boinc boinc      1021 Jan 13 05:34 memory_monitor_summary.json
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc       528 Jan 13 05:34 boinc_task_state.xml
[2026-01-13 06:26:12] -rw------- 1 boinc boinc    318063 Jan 13 05:34 log.48188456._000153.job.log.tgz.1
[2026-01-13 06:26:12] -rw------- 1 boinc boinc      7772 Jan 13 05:34 heartbeat.json
[2026-01-13 06:26:12] -rw------- 1 boinc boinc      4907 Jan 13 05:35 pilotlog.txt
[2026-01-13 06:26:12] -rw------- 1 boinc boinc    986970 Jan 13 05:35 log.48188456._000153.job.log.1
[2026-01-13 06:26:12] -rw------- 1 boinc boinc       357 Jan 13 05:35 output.list
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc       620 Jan 13 05:35 runtime_log
[2026-01-13 06:26:12] -rw------- 1 boinc boinc   1320960 Jan 13 05:35 result.tar.gz
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc      9222 Jan 13 05:35 runtime_log.err
[2026-01-13 06:26:12] -rw------- 1 boinc boinc       662 Jan 13 05:35 7kKKDmfaWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhenKDmEMKQNn.diag
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc        26 Jan 13 06:26 wrapper_checkpoint.txt
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc      8192 Jan 13 06:26 boinc_mmap_file
[2026-01-13 06:26:12] -rw-r--r-- 1 boinc boinc     21175 Jan 13 06:26 stderr.txt
[2026-01-13 06:26:12] HITS file was successfully produced:
[2026-01-13 06:26:12] -rw------- 1 boinc boinc 195338804 Jan 13 05:33 shared/HITS.pool.root.1
[2026-01-13 06:26:12]  *** Contents of shared directory: ***
[2026-01-13 06:26:12] total 472752
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc 286811103 Jan 13 03:38 ATLAS.root_0
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc    592405 Jan 13 03:38 input.tar.gz
[2026-01-13 06:26:12] -rw-r--r-- 2 boinc boinc     15847 Jan 13 03:38 start_atlas.sh
[2026-01-13 06:26:12] -rw------- 1 boinc boinc 195338804 Jan 13 05:33 HITS.pool.root.1
[2026-01-13 06:26:12] -rw------- 1 boinc boinc   1320960 Jan 13 05:35 result.tar.gz
06:26:13 (2615613): run_atlas exited; CPU time 26778.102867
06:26:13 (2615613): called boinc_finish(0)

</stderr_txt>
]]>

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