Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:26:07 (3210720): wrapper (7.7.26015): starting
12:26:07 (3210720): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 12:26:07] Arguments: --nthreads 4
[2026-01-13 12:26:07] Threads: 4
[2026-01-13 12:26:07] Checking for CVMFS
[2026-01-13 12:26:07] No cvmfs_config command found, will try listing directly
[2026-01-13 12:26:07] CVMFS is ok
[2026-01-13 12:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 12:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 12:26:07] Further information can be found at the LHC@home message board.
[2026-01-13 12:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 12:26:07] Checking for apptainer binary...
[2026-01-13 12:26:07] which: no apptainer in ((null))
[2026-01-13 12:26:07] apptainer is not installed, using version from CVMFS
[2026-01-13 12:26:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 12:26:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-13 12:26:07] apptainer works
[2026-01-13 12:26:07] Set ATHENA_PROC_NUMBER=4
[2026-01-13 12:26:07] Set ATHENA_CORE_NUMBER=4
[2026-01-13 12:26:07] Starting ATLAS job with PandaID=6966979361
[2026-01-13 12:26:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 14:02:03]  *** The last 200 lines of the pilot log: ***
[2026-01-13 14:02:03]  protocol_id=None
[2026-01-13 14:02:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-13 14:02:03]  replicas=None
[2026-01-13 14:02:03]  scope=mc23_13p6TeV
[2026-01-13 14:02:03]  status=None
[2026-01-13 14:02:03]  status_code=0
[2026-01-13 14:02:03]  storage_token=
[2026-01-13 14:02:03]  surl=/scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979361/log.48188456._000122.job.log.tgz.1
[2026-01-13 14:02:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/3c/log.48188456._000122.job.log.tgz.1
[2026-01-13 14:02:03]  workdir=None
[2026-01-13 14:02:03] ]
[2026-01-13 14:02:03] 2026-01-13 12:55:14,847 | INFO     | transferring file log.48188456._000122.job.log.tgz.1 from /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979361/log.48188456._000122.job.log.tgz.1 to /scratch/
[2026-01-13 14:02:03] 2026-01-13 12:55:14,847 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979361/log.48188456._000122.job.log.tgz.1 /scratch/boinc/var/slot120/slots/0/
[2026-01-13 14:02:03] 2026-01-13 12:55:14,870 | INFO     | adding to output.list: log.48188456._000122.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/3c/log.48188456._000122.job.log.tg
[2026-01-13 14:02:03] 2026-01-13 12:55:14,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 14:02:03] 2026-01-13 12:55:14,871 | INFO     | summary of transferred files:
[2026-01-13 14:02:03] 2026-01-13 12:55:14,871 | INFO     |  -- lfn=log.48188456._000122.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 14:02:03] 2026-01-13 12:55:14,871 | INFO     | stage-out finished correctly
[2026-01-13 14:02:03] 2026-01-13 12:55:15,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 14:02:03] 2026-01-13 12:55:15,404 | INFO     | monitor loop #386: job 0:6966979361 is in state 'finished'
[2026-01-13 14:02:03] 2026-01-13 12:55:15,418 | INFO     | job 6966979361 has state=finished
[2026-01-13 14:02:03] 2026-01-13 12:55:15,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 14:02:03] 2026-01-13 12:55:15,419 | INFO     | preparing for final server update for job 6966979361 in state='finished'
[2026-01-13 14:02:03] 2026-01-13 12:55:15,420 | INFO     | this job has now completed (state=finished)
[2026-01-13 14:02:03] 2026-01-13 12:55:15,420 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 14:02:03] 2026-01-13 12:55:15,420 | INFO     | log transfer has been attempted: DONE
[2026-01-13 14:02:03] 2026-01-13 12:55:15,420 | INFO     | job 6966979361 has finished - writing final server update
[2026-01-13 14:02:03] 2026-01-13 12:55:15,421 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1129761/.job.ad'
[2026-01-13 14:02:03] 2026-01-13 12:55:15,421 | INFO     | total number of processed events: 400 (read)
[2026-01-13 14:02:03] 2026-01-13 12:55:15,422 | INFO     | executing command: lscpu
[2026-01-13 14:02:03] 2026-01-13 12:55:15,497 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 14:02:03] 2026-01-13 12:55:15,528 | INFO     | time since job start (5339s) is within the limit (349056.0s)
[2026-01-13 14:02:03] 2026-01-13 12:55:15,529 | INFO     | 5340s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 14:02:03] 2026-01-13 12:55:17,534 | INFO     | time since job start (5341s) is within the limit (349056.0s)
[2026-01-13 14:02:03] 2026-01-13 12:55:17,922 | INFO     | monitor loop #387: job 0:6966979361 is in state 'finished'
[2026-01-13 14:02:03] 2026-01-13 12:55:17,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,540 | INFO     | time since job start (5343s) is within the limit (349056.0s)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,725 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 14:02:03] 2026-01-13 12:55:19,745 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2740.0931640624985
[2026-01-13 14:02:03] 2026-01-13 12:55:19,768 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979361/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,769 | INFO     | extracted standard info from prmon json
[2026-01-13 14:02:03] 2026-01-13 12:55:19,769 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 14:02:03] 2026-01-13 12:55:19,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 14:02:03] 2026-01-13 12:55:19,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 14:02:03] 2026-01-13 12:55:19,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 14:02:03] 2026-01-13 12:55:19,771 | INFO     | fitting pss+swap vs Time
[2026-01-13 14:02:03] 2026-01-13 12:55:19,772 | INFO     | sum of square deviations: 164765880.0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,772 | INFO     | sum of deviations: -20282319561.999992
[2026-01-13 14:02:03] 2026-01-13 12:55:19,772 | INFO     | mean x: 1768306348.0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,772 | INFO     | mean y: 2588398.037037037
[2026-01-13 14:02:03] 2026-01-13 12:55:19,772 | INFO     | intersect: 217677233377.01672
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | chi2: 0.1458276125414317
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | current memory leak: -123.10 B/s (using 81 data points, chi2=0.15)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | could have reported an average CPU frequency of 2757 MHz (6 samples)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | ..............................
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | . Timing measurements:
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | . get job = 0 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,773 | INFO     | . initial setup = 1 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | . payload setup = 5 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | . stage-in = 0 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | . payload execution = 5312 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | . stage-out = 0 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | . log creation = 0 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,774 | INFO     | ..............................
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | 
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | job summary report
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | --------------------------------------------------
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | PanDA job id: 6966979361
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | task id: 48188456
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | errors: (none)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 14:02:03] 2026-01-13 12:55:19,868 | INFO     | pilot state: finished 
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | transexitcode: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | exeerrorcode: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | exeerrordiag: 
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | exitcode: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | exitmsg: OK
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | cpuconsumptiontime: 20415 s
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | nevents: 400
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | neventsw: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | pid: 3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | pgrp: 3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | corecount: 4
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | event service: False
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | sizes: {0: 2283954, 1: 2284153, 5: 2284415, 11: 2284471, 5321: 2310995, 5322: 2320017, 5323: 2320201, 5327: 2320395}
[2026-01-13 14:02:03] 2026-01-13 12:55:19,869 | INFO     | --------------------------------------------------
[2026-01-13 14:02:03] 2026-01-13 12:55:19,870 | INFO     | 
[2026-01-13 14:02:03] 2026-01-13 12:55:19,870 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-13 14:02:03] 2026-01-13 12:55:19,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,895 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,895 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | job 6966979361 has completed (purged errors)
[2026-01-13 14:02:03] 2026-01-13 12:55:19,897 | INFO     | overall cleanup function is called
[2026-01-13 14:02:03] 2026-01-13 12:55:20,905 | INFO     | --- collectZombieJob: --- 10, [3222138]
[2026-01-13 14:02:03] 2026-01-13 12:55:20,905 | INFO     | zombie collector waiting for pid 3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:20,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 14:02:03] 2026-01-13 12:55:20,905 | INFO     | collected zombie processes
[2026-01-13 14:02:03] 2026-01-13 12:55:20,905 | INFO     | will attempt to kill all subprocesses of pid=3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:21,313 | INFO     | process IDs to be killed: [3222138] (in reverse order)
[2026-01-13 14:02:03] 2026-01-13 12:55:21,472 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 14:02:03] 2026-01-13 12:55:21,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 14:02:03] 2026-01-13 12:55:21,495 | INFO     | did not find any defunct processes belonging to 3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:21,509 | INFO     | did not find any defunct processes belonging to 3222138
[2026-01-13 14:02:03] 2026-01-13 12:55:21,509 | INFO     | ready for new job
[2026-01-13 14:02:03] 2026-01-13 12:55:21,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 14:02:03] 2026-01-13 12:55:21,511 | INFO     | ***************************************
[2026-01-13 14:02:03] 2026-01-13 12:55:21,511 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 14:02:03] 2026-01-13 12:55:21,511 | INFO     | ***************************************
[2026-01-13 14:02:03] 2026-01-13 12:55:21,511 | INFO     | 
[2026-01-13 14:02:03] 2026-01-13 12:55:21,517 | INFO     | architecture information:
[2026-01-13 14:02:03] 2026-01-13 12:55:21,517 | INFO     | executing command: cat /etc/os-release
[2026-01-13 14:02:03] 2026-01-13 12:55:21,531 | INFO     | cat /etc/os-release:
[2026-01-13 14:02:03] NAME="CentOS Linux"
[2026-01-13 14:02:03] VERSION="7 (Core)"
[2026-01-13 14:02:03] ID="centos"
[2026-01-13 14:02:03] ID_LIKE="rhel fedora"
[2026-01-13 14:02:03] VERSION_ID="7"
[2026-01-13 14:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 14:02:03] ANSI_COLOR="0;31"
[2026-01-13 14:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 14:02:03] HOME_URL="https://www.centos.org/"
[2026-01-13 14:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 14:02:03] 
[2026-01-13 14:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 14:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 14:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 14:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 14:02:03] 
[2026-01-13 14:02:03] 2026-01-13 12:55:21,531 | INFO     | ***************************************
[2026-01-13 14:02:03] 2026-01-13 12:55:22,034 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-13 14:02:03] 2026-01-13 12:55:22,058 | INFO     | sufficient remaining disk space (3375736291328 B)
[2026-01-13 14:02:03] 2026-01-13 12:55:22,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 14:02:03] 2026-01-13 12:55:22,059 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 14:02:03] 2026-01-13 12:55:22,059 | INFO     | update_server=False
[2026-01-13 14:02:03] 2026-01-13 12:55:22,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 14:02:03] 2026-01-13 12:55:22,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 14:02:03] 2026-01-13 12:55:22,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 14:02:03] 2026-01-13 12:55:22,060 | INFO     | aborting loop
[2026-01-13 14:02:03] 2026-01-13 12:55:22,145 | INFO     | all payload control threads have been joined
[2026-01-13 14:02:03] 2026-01-13 12:55:22,417 | INFO     | all data control threads have been joined
[2026-01-13 14:02:03] 2026-01-13 12:55:22,857 | INFO     | all job control threads have been joined
[2026-01-13 14:02:03] 2026-01-13 12:55:22,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 14:02:03] 2026-01-13 12:55:23,064 | INFO     | [job] retrieve thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,066 | INFO     | [job] job monitor thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,111 | INFO     | [job] validate thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,151 | INFO     | [payload] control thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,222 | INFO     | [data] copytool_in thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,291 | INFO     | [payload] validate_post thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,422 | INFO     | [data] control thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,447 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,454 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:23,510 | INFO     | [monitor] cgroup control has ended
[2026-01-13 14:02:03] 2026-01-13 12:55:23,863 | INFO     | [job] control thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:24,117 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:24,299 | INFO     | [payload] failed_post thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:24,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 14:02:03] 2026-01-13 12:55:24,950 | INFO     | [data] copytool_out thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:25,884 | INFO     | [job] queue monitor thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:26,066 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:32,236 | INFO     | job.realtimelogging is not enabled
[2026-01-13 14:02:03] 2026-01-13 12:55:33,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 14:02:03] 2026-01-13 12:55:35,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23144677177152)>', '<ExcThread(monitor, started 23144442074880)>']
[2026-01-13 14:02:03] 2026-01-13 12:55:40,157 | INFO     | all workflow threads have been joined
[2026-01-13 14:02:03] 2026-01-13 12:55:40,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 14:02:03] 2026-01-13 12:55:40,158 | INFO     | traces error code: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:40,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 14:02:03] 2026-01-13 12:55:53,245 | INFO     | PID=3214746 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 14:02:03] 2026-01-13 12:55:53,245 | INFO     | .. there are 3 such processes running
[2026-01-13 14:02:03] 2026-01-13 12:55:53,246 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 14:02:03] 2026-01-13 12:55:53,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 14:02:03] 2026-01-13 12:55:53,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 14:02:03] 2026-01-13 12:55:53,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 14:02:03] 2026-01-13 12:55:53,246 | INFO     | [monitor] control thread has ended
[2026-01-13 14:02:03] 2026-01-13 12:55:53,374 [wrapper] ==== pilot stdout END ====
[2026-01-13 14:02:03] 2026-01-13 12:55:53,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 14:02:03] 2026-01-13 12:55:53,380 [wrapper] pilotpid: 3214746
[2026-01-13 14:02:03] 2026-01-13 12:55:53,382 [wrapper] Pilot exit status: 0
[2026-01-13 14:02:03] 2026-01-13 12:55:53,392 [wrapper] pandaids: 6966979361
[2026-01-13 14:02:03] 2026-01-13 12:55:53,497 [wrapper] cleanup supervisor_pilot 3281097 3214747
[2026-01-13 14:02:03] 2026-01-13 12:55:53,500 [wrapper] Test setup, not cleaning
[2026-01-13 14:02:03] 2026-01-13 12:55:53,503 [wrapper] apfmon messages muted
[2026-01-13 14:02:03] 2026-01-13 12:55:53,508 [wrapper] ==== wrapper stdout END ====
[2026-01-13 14:02:03] 2026-01-13 12:55:53,511 [wrapper] ==== wrapper stderr END ====
[2026-01-13 14:02:03]  *** Error codes and diagnostics ***
[2026-01-13 14:02:03]     "exeErrorCode": 0,
[2026-01-13 14:02:03]     "exeErrorDiag": "",
[2026-01-13 14:02:03]     "pilotErrorCode": 0,
[2026-01-13 14:02:03]     "pilotErrorDiag": "",
[2026-01-13 14:02:03]  *** Listing of results directory ***
[2026-01-13 14:02:03] total 474948
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 14:02:03] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc       100 Jan 13 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 14:02:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 12:26 run_atlas
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc       105 Jan 13 12:26 job.xml
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc      6692 Jan 13 12:26 init_data.xml
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc 286789784 Jan 13 12:26 EVNT.48188454._000005.pool.root.1
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc     15847 Jan 13 12:26 start_atlas.sh
[2026-01-13 14:02:03] drwxrwx--x 2 boinc boinc      4096 Jan 13 12:26 shared
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc    592396 Jan 13 12:26 input.tar.gz
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc         0 Jan 13 12:26 boinc_lockfile
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc      2621 Jan 13 12:26 pandaJob.out
[2026-01-13 14:02:03] -rw------- 1 boinc boinc    992677 Jan 13 12:26 agis_schedconf.cvmfs.json
[2026-01-13 14:02:03] -rw------- 1 boinc boinc   1516240 Jan 13 12:26 agis_ddmendpoints.agis.ALL.json
[2026-01-13 14:02:03] drwx------ 5 boinc boinc      4096 Jan 13 12:26 pilot3
[2026-01-13 14:02:03] -rw------- 1 boinc boinc 193485023 Jan 13 13:54 HITS.48188456._000122.pool.root.1
[2026-01-13 14:02:03] -rw------- 1 boinc boinc        95 Jan 13 13:54 pilot_heartbeat.json
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc       528 Jan 13 13:55 boinc_task_state.xml
[2026-01-13 14:02:03] -rw------- 1 boinc boinc      1036 Jan 13 13:55 memory_monitor_summary.json
[2026-01-13 14:02:03] -rw------- 1 boinc boinc    315816 Jan 13 13:55 log.48188456._000122.job.log.tgz.1
[2026-01-13 14:02:03] -rw------- 1 boinc boinc      7780 Jan 13 13:55 heartbeat.json
[2026-01-13 14:02:03] -rw------- 1 boinc boinc       822 Jan 13 13:55 pilotlog.txt
[2026-01-13 14:02:03] -rw------- 1 boinc boinc    757853 Jan 13 13:55 log.48188456._000122.job.log.1
[2026-01-13 14:02:03] -rw------- 1 boinc boinc       357 Jan 13 13:55 output.list
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc       620 Jan 13 13:55 runtime_log
[2026-01-13 14:02:03] -rw------- 1 boinc boinc   1095680 Jan 13 13:55 result.tar.gz
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc      9222 Jan 13 13:55 runtime_log.err
[2026-01-13 14:02:03] -rw------- 1 boinc boinc       661 Jan 13 13:55 UakKDm6ZWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvdnKDmiiX0vm.diag
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc        26 Jan 13 14:01 wrapper_checkpoint.txt
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc      8192 Jan 13 14:02 boinc_mmap_file
[2026-01-13 14:02:03] -rw-r--r-- 1 boinc boinc     21709 Jan 13 14:02 stderr.txt
[2026-01-13 14:02:03] HITS file was successfully produced:
[2026-01-13 14:02:03] -rw------- 1 boinc boinc 193485023 Jan 13 13:54 shared/HITS.pool.root.1
[2026-01-13 14:02:03]  *** Contents of shared directory: ***
[2026-01-13 14:02:03] total 470700
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc 286789784 Jan 13 12:26 ATLAS.root_0
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc     15847 Jan 13 12:26 start_atlas.sh
[2026-01-13 14:02:03] -rw-r--r-- 2 boinc boinc    592396 Jan 13 12:26 input.tar.gz
[2026-01-13 14:02:03] -rw------- 1 boinc boinc 193485023 Jan 13 13:54 HITS.pool.root.1
[2026-01-13 14:02:03] -rw------- 1 boinc boinc   1095680 Jan 13 13:55 result.tar.gz
14:02:04 (3210720): run_atlas exited; CPU time 20637.196141
14:02:04 (3210720): called boinc_finish(0)

</stderr_txt>
]]>

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