Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:54 (3511183): wrapper (7.7.26015): starting
15:44:54 (3511183): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 15:44:54] Arguments: --nthreads 4
[2026-01-13 15:44:54] Threads: 4
[2026-01-13 15:44:54] Checking for CVMFS
[2026-01-13 15:44:54] No cvmfs_config command found, will try listing directly
[2026-01-13 15:44:54] CVMFS is ok
[2026-01-13 15:44:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 15:44:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 15:44:54] Further information can be found at the LHC@home message board.
[2026-01-13 15:44:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 15:44:54] Checking for apptainer binary...
[2026-01-13 15:44:54] which: no apptainer in ((null))
[2026-01-13 15:44:54] apptainer is not installed, using version from CVMFS
[2026-01-13 15:44:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 15:44:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-13 15:44:54] apptainer works
[2026-01-13 15:44:54] Set ATHENA_PROC_NUMBER=4
[2026-01-13 15:44:54] Set ATHENA_CORE_NUMBER=4
[2026-01-13 15:44:54] Starting ATLAS job with PandaID=6966979289
[2026-01-13 15:44:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 17:35:18]  *** The last 200 lines of the pilot log: ***
[2026-01-13 17:35:18] 2026-01-13 16:29:08,523 | INFO     | time since job start (6241s) is within the limit (349056.0s)
[2026-01-13 17:35:18] 2026-01-13 16:29:10,113 | INFO     | monitor loop #441: job 0:6966979289 is in state 'finished'
[2026-01-13 17:35:18] 2026-01-13 16:29:10,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 17:35:18] 2026-01-13 16:29:10,528 | INFO     | time since job start (6243s) is within the limit (349056.0s)
[2026-01-13 17:35:18] 2026-01-13 16:29:12,534 | INFO     | time since job start (6245s) is within the limit (349056.0s)
[2026-01-13 17:35:18] 2026-01-13 16:29:12,617 | INFO     | monitor loop #442: job 0:6966979289 is in state 'finished'
[2026-01-13 17:35:18] 2026-01-13 16:29:12,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,319 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 17:35:18] 2026-01-13 16:29:13,339 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2722.979820312499
[2026-01-13 17:35:18] 2026-01-13 16:29:13,362 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6966979289/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,363 | INFO     | extracted standard info from prmon json
[2026-01-13 17:35:18] 2026-01-13 16:29:13,363 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 17:35:18] 2026-01-13 16:29:13,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 17:35:18] 2026-01-13 16:29:13,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 17:35:18] 2026-01-13 16:29:13,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 17:35:18] 2026-01-13 16:29:13,366 | INFO     | fitting pss+swap vs Time
[2026-01-13 17:35:18] 2026-01-13 16:29:13,366 | INFO     | sum of square deviations: 329031285.5
[2026-01-13 17:35:18] 2026-01-13 16:29:13,366 | INFO     | sum of deviations: -3303579561.999998
[2026-01-13 17:35:18] 2026-01-13 16:29:13,366 | INFO     | mean x: 1768318619.5
[2026-01-13 17:35:18] 2026-01-13 16:29:13,367 | INFO     | mean y: 2427077.4901960786
[2026-01-13 17:35:18] 2026-01-13 16:29:13,367 | INFO     | intersect: 17756912769.04688
[2026-01-13 17:35:18] 2026-01-13 16:29:13,367 | INFO     | chi2: 1.4273216295816475
[2026-01-13 17:35:18] 2026-01-13 16:29:13,367 | INFO     | sum of square deviations: 282974608.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | sum of deviations: -2954978897.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | mean x: 1768318467.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | mean y: 2428232.6907216497
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | intersect: 18468197264.37851
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | chi2: 1.42640802923963
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | current chi2=1.42640802923963 (change=0.06400802195405492 %)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,368 | INFO     | right removable region: 96
[2026-01-13 17:35:18] 2026-01-13 16:29:13,369 | INFO     | sum of square deviations: 282974608.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,369 | INFO     | sum of deviations: -12941612807.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,369 | INFO     | mean x: 1768318772.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,369 | INFO     | mean y: 2457755.18556701
[2026-01-13 17:35:18] 2026-01-13 16:29:13,369 | INFO     | intersect: 80875073953.22165
[2026-01-13 17:35:18] 2026-01-13 16:29:13,370 | INFO     | chi2: 0.20170086565815726
[2026-01-13 17:35:18] 2026-01-13 16:29:13,370 | INFO     | current chi2=0.20170086565815726 (change=85.86857639666847 %)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,370 | INFO     | sum of square deviations: 241429643.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,370 | INFO     | sum of deviations: -8376826067.500001
[2026-01-13 17:35:18] 2026-01-13 16:29:13,370 | INFO     | mean x: 1768318924.5
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | mean y: 2440940.3586956523
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | intersect: 61357375977.913994
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | chi2: 0.17268869841984336
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | current chi2=0.17268869841984336 (change=14.383759407103259 %)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | left removable region: 20
[2026-01-13 17:35:18] 2026-01-13 16:29:13,371 | INFO     | sum of square deviations: 136095575.0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | sum of deviations: 873151255.0000001
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | mean x: 1768319046.5
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | mean y: 2400685.447368421
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | intersect: -11342641169.821465
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | chi2: 0.0007344818354575384
[2026-01-13 17:35:18] 2026-01-13 16:29:13,372 | INFO     | current memory leak: 6.42 B/s (using 76 data points, chi2=0.00)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | could have reported an average CPU frequency of 2757 MHz (7 samples)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | ..............................
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . Timing measurements:
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . get job = 0 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . initial setup = 1 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . payload setup = 8 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . stage-in = 0 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,373 | INFO     | . payload execution = 6206 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,374 | INFO     | . stage-out = 0 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,374 | INFO     | . log creation = 0 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,374 | INFO     | ..............................
[2026-01-13 17:35:18] 2026-01-13 16:29:13,884 | INFO     | 
[2026-01-13 17:35:18] 2026-01-13 16:29:13,884 | INFO     | job summary report
[2026-01-13 17:35:18] 2026-01-13 16:29:13,884 | INFO     | --------------------------------------------------
[2026-01-13 17:35:18] 2026-01-13 16:29:13,884 | INFO     | PanDA job id: 6966979289
[2026-01-13 17:35:18] 2026-01-13 16:29:13,884 | INFO     | task id: 48188456
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | errors: (none)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | pilot state: finished 
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | transexitcode: 0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | exeerrorcode: 0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | exeerrordiag: 
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | exitcode: 0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | exitmsg: OK
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | cpuconsumptiontime: 23418 s
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | nevents: 400
[2026-01-13 17:35:18] 2026-01-13 16:29:13,885 | INFO     | neventsw: 0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | pid: 3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | pgrp: 3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | corecount: 4
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | event service: False
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | sizes: {0: 2283893, 1: 2284148, 7: 2284410, 12: 2284438, 6218: 2311508, 6220: 2320530, 6222: 2320714, 6230: 2320908}
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | --------------------------------------------------
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | 
[2026-01-13 17:35:18] 2026-01-13 16:29:13,886 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2026-01-13 17:35:18] 2026-01-13 16:29:13,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | job 6966979289 has completed (purged errors)
[2026-01-13 17:35:18] 2026-01-13 16:29:13,919 | INFO     | overall cleanup function is called
[2026-01-13 17:35:18] 2026-01-13 16:29:14,404 | INFO     | PID=3515845 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 17:35:18] 2026-01-13 16:29:14,930 | INFO     | --- collectZombieJob: --- 10, [3523930]
[2026-01-13 17:35:18] 2026-01-13 16:29:14,930 | INFO     | zombie collector waiting for pid 3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:14,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 17:35:18] 2026-01-13 16:29:14,931 | INFO     | collected zombie processes
[2026-01-13 17:35:18] 2026-01-13 16:29:14,931 | INFO     | will attempt to kill all subprocesses of pid=3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:15,543 | INFO     | process IDs to be killed: [3523930] (in reverse order)
[2026-01-13 17:35:18] 2026-01-13 16:29:15,729 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 17:35:18] 2026-01-13 16:29:15,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 17:35:18] 2026-01-13 16:29:15,758 | INFO     | did not find any defunct processes belonging to 3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:15,782 | INFO     | did not find any defunct processes belonging to 3523930
[2026-01-13 17:35:18] 2026-01-13 16:29:15,783 | INFO     | ready for new job
[2026-01-13 17:35:18] 2026-01-13 16:29:15,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 17:35:18] 2026-01-13 16:29:15,785 | INFO     | ***************************************
[2026-01-13 17:35:18] 2026-01-13 16:29:15,785 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 17:35:18] 2026-01-13 16:29:15,785 | INFO     | ***************************************
[2026-01-13 17:35:18] 2026-01-13 16:29:15,785 | INFO     | 
[2026-01-13 17:35:18] 2026-01-13 16:29:15,793 | INFO     | architecture information:
[2026-01-13 17:35:18] 2026-01-13 16:29:15,793 | INFO     | executing command: cat /etc/os-release
[2026-01-13 17:35:18] 2026-01-13 16:29:15,815 | INFO     | cat /etc/os-release:
[2026-01-13 17:35:18] NAME="CentOS Linux"
[2026-01-13 17:35:18] VERSION="7 (Core)"
[2026-01-13 17:35:18] ID="centos"
[2026-01-13 17:35:18] ID_LIKE="rhel fedora"
[2026-01-13 17:35:18] VERSION_ID="7"
[2026-01-13 17:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 17:35:18] ANSI_COLOR="0;31"
[2026-01-13 17:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 17:35:18] HOME_URL="https://www.centos.org/"
[2026-01-13 17:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 17:35:18] 
[2026-01-13 17:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 17:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 17:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 17:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 17:35:18] 
[2026-01-13 17:35:18] 2026-01-13 16:29:15,815 | INFO     | ***************************************
[2026-01-13 17:35:18] 2026-01-13 16:29:16,318 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2026-01-13 17:35:18] 2026-01-13 16:29:16,341 | INFO     | sufficient remaining disk space (3374367899648 B)
[2026-01-13 17:35:18] 2026-01-13 16:29:16,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 17:35:18] 2026-01-13 16:29:16,341 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 17:35:19] 2026-01-13 16:29:16,341 | INFO     | update_server=False
[2026-01-13 17:35:19] 2026-01-13 16:29:16,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 17:35:19] 2026-01-13 16:29:16,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 17:35:19] 2026-01-13 16:29:16,342 | INFO     | aborting loop
[2026-01-13 17:35:19] 2026-01-13 16:29:16,365 | INFO     | all payload control threads have been joined
[2026-01-13 17:35:19] 2026-01-13 16:29:16,433 | INFO     | all data control threads have been joined
[2026-01-13 17:35:19] 2026-01-13 16:29:16,531 | INFO     | all job control threads have been joined
[2026-01-13 17:35:19] 2026-01-13 16:29:16,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 17:35:19] 2026-01-13 16:29:16,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 17:35:19] 2026-01-13 16:29:17,347 | INFO     | [job] retrieve thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,348 | INFO     | [job] job monitor thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,371 | INFO     | [payload] control thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,442 | INFO     | [data] control thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,503 | INFO     | [payload] validate_post thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,536 | INFO     | [job] control thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:17,909 | INFO     | [job] validate thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,015 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,185 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,223 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 17:35:19] 2026-01-13 16:29:18,513 | INFO     | [payload] failed_post thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,541 | INFO     | [data] copytool_in thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:18,637 | INFO     | [data] copytool_out thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:19,483 | INFO     | [job] queue monitor thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:20,670 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:27,170 | INFO     | job.realtimelogging is not enabled
[2026-01-13 17:35:19] 2026-01-13 16:29:28,174 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 17:35:19] 2026-01-13 16:29:47,228 | INFO     | PID=3515845 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 17:35:19] 2026-01-13 16:29:47,229 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 17:35:19] 2026-01-13 16:29:47,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 17:35:19] 2026-01-13 16:29:47,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 17:35:19] 2026-01-13 16:30:04,863 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-13 17:35:19] 2026-01-13 16:30:15,226 | INFO     | [monitor] cgroup control has ended
[2026-01-13 17:35:19] 2026-01-13 16:30:16,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23031735359296)>', '<ExcThread(monitor, started 23031499953920)>']
[2026-01-13 17:35:19] 2026-01-13 16:30:16,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 17:35:19] 2026-01-13 16:30:16,359 | INFO     | [monitor] control thread has ended
[2026-01-13 17:35:19] 2026-01-13 16:30:21,330 | INFO     | all workflow threads have been joined
[2026-01-13 17:35:19] 2026-01-13 16:30:21,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 17:35:19] 2026-01-13 16:30:21,331 | INFO     | traces error code: 0
[2026-01-13 17:35:19] 2026-01-13 16:30:21,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 17:35:19] 2026-01-13 16:30:21,495 [wrapper] ==== pilot stdout END ====
[2026-01-13 17:35:19] 2026-01-13 16:30:21,498 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 17:35:19] 2026-01-13 16:30:21,501 [wrapper] pilotpid: 3515845
[2026-01-13 17:35:19] 2026-01-13 16:30:21,505 [wrapper] Pilot exit status: 0
[2026-01-13 17:35:19] 2026-01-13 16:30:21,518 [wrapper] pandaids: 6966979289
[2026-01-13 17:35:19] 2026-01-13 16:30:21,667 [wrapper] cleanup supervisor_pilot 3595267 3515846
[2026-01-13 17:35:19] 2026-01-13 16:30:21,672 [wrapper] Test setup, not cleaning
[2026-01-13 17:35:19] 2026-01-13 16:30:21,678 [wrapper] apfmon messages muted
[2026-01-13 17:35:19] 2026-01-13 16:30:21,682 [wrapper] ==== wrapper stdout END ====
[2026-01-13 17:35:19] 2026-01-13 16:30:21,685 [wrapper] ==== wrapper stderr END ====
[2026-01-13 17:35:19]  *** Error codes and diagnostics ***
[2026-01-13 17:35:19]     "exeErrorCode": 0,
[2026-01-13 17:35:19]     "exeErrorDiag": "",
[2026-01-13 17:35:19]     "pilotErrorCode": 0,
[2026-01-13 17:35:19]     "pilotErrorDiag": "",
[2026-01-13 17:35:19]  *** Listing of results directory ***
[2026-01-13 17:35:19] total 479316
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 17:35:19] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc       100 Jan 13 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 17:35:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 15:44 run_atlas
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc       105 Jan 13 15:44 job.xml
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc      6692 Jan 13 15:44 init_data.xml
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc 286918807 Jan 13 15:44 EVNT.48188454._000002.pool.root.1
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc     15847 Jan 13 15:44 start_atlas.sh
[2026-01-13 17:35:19] drwxrwx--x 2 boinc boinc      4096 Jan 13 15:44 shared
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc    592402 Jan 13 15:44 input.tar.gz
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc         0 Jan 13 15:44 boinc_lockfile
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc      2618 Jan 13 15:44 pandaJob.out
[2026-01-13 17:35:19] -rw------- 1 boinc boinc    996105 Jan 13 15:45 agis_schedconf.cvmfs.json
[2026-01-13 17:35:19] -rw------- 1 boinc boinc   1516246 Jan 13 15:45 agis_ddmendpoints.agis.ALL.json
[2026-01-13 17:35:19] drwx------ 5 boinc boinc      4096 Jan 13 15:45 pilot3
[2026-01-13 17:35:19] -rw------- 1 boinc boinc 197561300 Jan 13 17:28 HITS.48188456._000050.pool.root.1
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc       528 Jan 13 17:28 boinc_task_state.xml
[2026-01-13 17:35:19] -rw------- 1 boinc boinc        95 Jan 13 17:28 pilot_heartbeat.json
[2026-01-13 17:35:19] -rw------- 1 boinc boinc      1021 Jan 13 17:28 memory_monitor_summary.json
[2026-01-13 17:35:19] -rw------- 1 boinc boinc    333249 Jan 13 17:29 log.48188456._000050.job.log.tgz.1
[2026-01-13 17:35:19] -rw------- 1 boinc boinc      7766 Jan 13 17:29 heartbeat.json
[2026-01-13 17:35:19] -rw------- 1 boinc boinc      4832 Jan 13 17:30 pilotlog.txt
[2026-01-13 17:35:19] -rw------- 1 boinc boinc    874464 Jan 13 17:30 log.48188456._000050.job.log.1
[2026-01-13 17:35:19] -rw------- 1 boinc boinc       357 Jan 13 17:30 output.list
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc       620 Jan 13 17:30 runtime_log
[2026-01-13 17:35:19] -rw------- 1 boinc boinc   1228800 Jan 13 17:30 result.tar.gz
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc      9222 Jan 13 17:30 runtime_log.err
[2026-01-13 17:35:19] -rw------- 1 boinc boinc       663 Jan 13 17:30 E1xMDm5ZWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIdnKDm8PUZhm.diag
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc        26 Jan 13 17:34 wrapper_checkpoint.txt
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc      8192 Jan 13 17:35 boinc_mmap_file
[2026-01-13 17:35:19] -rw-r--r-- 1 boinc boinc     21184 Jan 13 17:35 stderr.txt
[2026-01-13 17:35:19] HITS file was successfully produced:
[2026-01-13 17:35:19] -rw------- 1 boinc boinc 197561300 Jan 13 17:28 shared/HITS.pool.root.1
[2026-01-13 17:35:19]  *** Contents of shared directory: ***
[2026-01-13 17:35:19] total 474932
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc 286918807 Jan 13 15:44 ATLAS.root_0
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc     15847 Jan 13 15:44 start_atlas.sh
[2026-01-13 17:35:19] -rw-r--r-- 2 boinc boinc    592402 Jan 13 15:44 input.tar.gz
[2026-01-13 17:35:19] -rw------- 1 boinc boinc 197561300 Jan 13 17:28 HITS.pool.root.1
[2026-01-13 17:35:19] -rw------- 1 boinc boinc   1228800 Jan 13 17:30 result.tar.gz
17:35:20 (3511183): run_atlas exited; CPU time 23755.620305
17:35:20 (3511183): called boinc_finish(0)

</stderr_txt>
]]>

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