Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:39:26 (19300): wrapper (7.7.26015): starting
17:39:26 (19300): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 17:39:26] Arguments: --nthreads 8
[2026-01-12 17:39:26] Threads: 8
[2026-01-12 17:39:26] Checking for CVMFS
[2026-01-12 17:39:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 17:39:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 17:39:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 17:39:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 17:39:27] 2.11.0.0 4014 133426 91252 155059 0 186 2714562 4096001 249 130560 2 9341162 99.524 10740419 621 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-12 17:39:27] CVMFS is ok
[2026-01-12 17:39:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 17:39:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 17:39:27] Further information can be found at the LHC@home message board.
[2026-01-12 17:39:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 17:39:27] Checking for apptainer binary...
[2026-01-12 17:39:27] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-12 17:39:27] apptainer is not installed, using version from CVMFS
[2026-01-12 17:39:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 17:39:27] WARNING: Environment variable TMPDIR already has value [/tmp/job_11013038/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node296
[2026-01-12 17:39:27] apptainer works
[2026-01-12 17:39:27] Set ATHENA_PROC_NUMBER=8
[2026-01-12 17:39:27] Set ATHENA_CORE_NUMBER=8
[2026-01-12 17:39:27] Starting ATLAS job with PandaID=6967000957
[2026-01-12 17:39:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11013038/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 18:52:57]  *** The last 200 lines of the pilot log: ***
[2026-01-12 18:52:57]  lfn=log.48188564._000045.job.log.tgz.1
[2026-01-12 18:52:57]  mtime=0
[2026-01-12 18:52:57]  protocol_id=None
[2026-01-12 18:52:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-12 18:52:57]  replicas=None
[2026-01-12 18:52:57]  scope=mc23_13p6TeV
[2026-01-12 18:52:57]  status=None
[2026-01-12 18:52:57]  status_code=0
[2026-01-12 18:52:57]  storage_token=
[2026-01-12 18:52:57]  surl=/tmp/job_11013038/atlas/pilot/slots/0/PanDA_Pilot-6967000957/log.48188564._000045.job.log.tgz.1
[2026-01-12 18:52:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/fe/log.48188564._000045.job.log.tgz.1
[2026-01-12 18:52:57]  workdir=None
[2026-01-12 18:52:57] ]
[2026-01-12 18:52:57] 2026-01-12 17:52:20,958 | INFO     | transferring file log.48188564._000045.job.log.tgz.1 from /tmp/job_11013038/atlas/pilot/slots/0/PanDA_Pilot-6967000957/log.48188564._000045.job.log.tgz.1 to /tmp/j
[2026-01-12 18:52:57] 2026-01-12 17:52:20,958 | INFO     | executing command: /usr/bin/env mv /tmp/job_11013038/atlas/pilot/slots/0/PanDA_Pilot-6967000957/log.48188564._000045.job.log.tgz.1 /tmp/job_11013038/atlas/pilot/sl
[2026-01-12 18:52:57] 2026-01-12 17:52:20,966 | INFO     | adding to output.list: log.48188564._000045.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/fe/log.48188564._000045.job.log.tg
[2026-01-12 18:52:57] 2026-01-12 17:52:20,966 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 18:52:57] 2026-01-12 17:52:20,966 | INFO     | summary of transferred files:
[2026-01-12 18:52:57] 2026-01-12 17:52:20,966 | INFO     |  -- lfn=log.48188564._000045.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 18:52:57] 2026-01-12 17:52:20,966 | INFO     | stage-out finished correctly
[2026-01-12 18:52:57] 2026-01-12 17:52:21,362 | INFO     | monitor loop #325: job 0:6967000957 is in state 'finished'
[2026-01-12 18:52:57] 2026-01-12 17:52:21,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:52:57] 2026-01-12 17:52:22,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 18:52:57] 2026-01-12 17:52:22,434 | INFO     | time since job start (4371s) is within the limit (349056.0s)
[2026-01-12 18:52:57] 2026-01-12 17:52:23,559 | INFO     | PID=23043 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 18:52:57] 2026-01-12 17:52:23,865 | INFO     | monitor loop #326: job 0:6967000957 is in state 'finished'
[2026-01-12 18:52:57] 2026-01-12 17:52:23,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:52:57] 2026-01-12 17:52:24,559 | INFO     | time since job start (4373s) is within the limit (349056.0s)
[2026-01-12 18:52:57] 2026-01-12 17:52:24,738 | INFO     | job 6967000957 has state=finished
[2026-01-12 18:52:57] 2026-01-12 17:52:24,738 | INFO     | preparing for final server update for job 6967000957 in state='finished'
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | this job has now completed (state=finished)
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | log transfer has been attempted: DONE
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | job 6967000957 has finished - writing final server update
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | total number of processed events: 400 (read)
[2026-01-12 18:52:57] 2026-01-12 17:52:24,739 | INFO     | executing command: lscpu
[2026-01-12 18:52:57] 2026-01-12 17:52:24,770 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 18:52:57] 2026-01-12 17:52:26,368 | INFO     | monitor loop #327: job 0:6967000957 is in state 'finished'
[2026-01-12 18:52:57] 2026-01-12 17:52:26,368 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,422 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 18:52:57] 2026-01-12 17:52:26,426 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2380.827890625
[2026-01-12 18:52:57] 2026-01-12 17:52:26,431 | INFO     | using path: /tmp/job_11013038/atlas/pilot/slots/0/PanDA_Pilot-6967000957/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,431 | INFO     | extracted standard info from prmon json
[2026-01-12 18:52:57] 2026-01-12 17:52:26,431 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 18:52:57] 2026-01-12 17:52:26,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 18:52:57] 2026-01-12 17:52:26,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 18:52:57] 2026-01-12 17:52:26,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 18:52:57] 2026-01-12 17:52:26,432 | INFO     | fitting pss+swap vs Time
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | sum of square deviations: 85136480.0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | sum of deviations: -134135523.00000018
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | mean x: 1768238247.0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | mean y: 2606397.1384615386
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | intersect: 2788528037.896319
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | chi2: 0.09676322553876714
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | current memory leak: -1.58 B/s (using 65 data points, chi2=0.10)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | could have reported an average CPU frequency of 2502 MHz (6 samples)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | ..............................
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . Timing measurements:
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . get job = 0 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . initial setup = 1 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . payload setup = 2 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . stage-in = 0 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . payload execution = 4350 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . stage-out = 0 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,433 | INFO     | . log creation = 0 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,434 | INFO     | ..............................
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | 
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | job summary report
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | --------------------------------------------------
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | PanDA job id: 6967000957
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | task id: 48188564
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | errors: (none)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,482 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | pilot state: finished 
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | transexitcode: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | exeerrorcode: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | exeerrordiag: 
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | exitcode: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | exitmsg: OK
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | cpuconsumptiontime: 27414 s
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | nevents: 400
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | neventsw: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | pid: 29683
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | pgrp: 29683
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | corecount: 8
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | event service: False
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | sizes: {0: 2284251, 2: 2284513, 11: 2284541, 4356: 2310622, 4357: 2319650, 4358: 2319706, 4362: 2320028}
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | --------------------------------------------------
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | 
[2026-01-12 18:52:57] 2026-01-12 17:52:26,483 | INFO     | executing command: ls -lF /tmp/job_11013038/atlas/pilot/slots/0
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,493 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,493 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 18:52:57] 2026-01-12 17:52:26,493 | INFO     | job 6967000957 has completed (purged errors)
[2026-01-12 18:52:57] 2026-01-12 17:52:26,493 | INFO     | overall cleanup function is called
[2026-01-12 18:52:57] 2026-01-12 17:52:27,499 | INFO     | --- collectZombieJob: --- 10, [29683]
[2026-01-12 18:52:57] 2026-01-12 17:52:27,499 | INFO     | zombie collector waiting for pid 29683
[2026-01-12 18:52:57] 2026-01-12 17:52:27,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 18:52:57] 2026-01-12 17:52:27,499 | INFO     | collected zombie processes
[2026-01-12 18:52:57] 2026-01-12 17:52:27,499 | INFO     | will attempt to kill all subprocesses of pid=29683
[2026-01-12 18:52:57] 2026-01-12 17:52:27,586 | INFO     | process IDs to be killed: [29683] (in reverse order)
[2026-01-12 18:52:57] 2026-01-12 17:52:27,615 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 18:52:57] 2026-01-12 17:52:27,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 18:52:57] 2026-01-12 17:52:27,619 | INFO     | did not find any defunct processes belonging to 29683
[2026-01-12 18:52:57] 2026-01-12 17:52:27,621 | INFO     | did not find any defunct processes belonging to 29683
[2026-01-12 18:52:57] 2026-01-12 17:52:27,621 | INFO     | ready for new job
[2026-01-12 18:52:57] 2026-01-12 17:52:27,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 18:52:57] 2026-01-12 17:52:27,622 | INFO     | ***************************************
[2026-01-12 18:52:57] 2026-01-12 17:52:27,622 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 18:52:57] 2026-01-12 17:52:27,622 | INFO     | ***************************************
[2026-01-12 18:52:57] 2026-01-12 17:52:27,622 | INFO     | 
[2026-01-12 18:52:57] 2026-01-12 17:52:27,635 | INFO     | architecture information:
[2026-01-12 18:52:57] 2026-01-12 17:52:27,635 | INFO     | executing command: cat /etc/os-release
[2026-01-12 18:52:57] 2026-01-12 17:52:27,641 | INFO     | cat /etc/os-release:
[2026-01-12 18:52:57] NAME="CentOS Linux"
[2026-01-12 18:52:57] VERSION="7 (Core)"
[2026-01-12 18:52:57] ID="centos"
[2026-01-12 18:52:57] ID_LIKE="rhel fedora"
[2026-01-12 18:52:57] VERSION_ID="7"
[2026-01-12 18:52:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 18:52:57] ANSI_COLOR="0;31"
[2026-01-12 18:52:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 18:52:57] HOME_URL="https://www.centos.org/"
[2026-01-12 18:52:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 18:52:57] 
[2026-01-12 18:52:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 18:52:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 18:52:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 18:52:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 18:52:57] 
[2026-01-12 18:52:57] 2026-01-12 17:52:27,641 | INFO     | ***************************************
[2026-01-12 18:52:57] 2026-01-12 17:52:28,144 | INFO     | executing command: df -mP /tmp/job_11013038/atlas/pilot/slots/0
[2026-01-12 18:52:57] 2026-01-12 17:52:28,150 | INFO     | sufficient remaining disk space (227004121088 B)
[2026-01-12 18:52:57] 2026-01-12 17:52:28,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 18:52:57] 2026-01-12 17:52:28,150 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 18:52:57] 2026-01-12 17:52:28,150 | INFO     | update_server=False
[2026-01-12 18:52:57] 2026-01-12 17:52:28,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 18:52:57] 2026-01-12 17:52:28,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 18:52:57] 2026-01-12 17:52:28,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 18:52:57] 2026-01-12 17:52:28,151 | INFO     | aborting loop
[2026-01-12 18:52:57] 2026-01-12 17:52:28,407 | INFO     | all payload control threads have been joined
[2026-01-12 18:52:57] 2026-01-12 17:52:28,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 18:52:57] 2026-01-12 17:52:29,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 18:52:57] 2026-01-12 17:52:29,089 | INFO     | all data control threads have been joined
[2026-01-12 18:52:57] 2026-01-12 17:52:29,156 | INFO     | [job] retrieve thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,156 | INFO     | [job] queue monitor thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,156 | INFO     | [job] job monitor thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,168 | INFO     | [job] validate thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,197 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,250 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,298 | INFO     | [payload] validate_post thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,318 | INFO     | all job control threads have been joined
[2026-01-12 18:52:57] 2026-01-12 17:52:29,412 | INFO     | [payload] control thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,710 | INFO     | [payload] failed_post thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:29,835 | INFO     | [data] copytool_in thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:30,094 | INFO     | [data] control thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:30,204 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:30,323 | INFO     | [job] control thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:30,478 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:31,033 | INFO     | [data] copytool_out thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:32,469 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 18:52:57] 2026-01-12 17:52:38,023 | INFO     | [monitor] cgroup control has ended
[2026-01-12 18:52:57] 2026-01-12 17:52:39,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058717952)>']
[2026-01-12 18:52:57] 2026-01-12 17:52:44,106 | INFO     | all workflow threads have been joined
[2026-01-12 18:52:57] 2026-01-12 17:52:44,106 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 18:52:57] 2026-01-12 17:52:44,106 | INFO     | traces error code: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:44,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 18:52:57] 2026-01-12 17:52:57,737 | INFO     | PID=23043 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 18:52:57] 2026-01-12 17:52:57,737 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 18:52:57] 2026-01-12 17:52:57,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 18:52:57] 2026-01-12 17:52:57,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 18:52:57] 2026-01-12 17:52:57,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 18:52:57] 2026-01-12 17:52:57,738 | INFO     | [monitor] control thread has ended
[2026-01-12 18:52:57] 2026-01-12 17:52:57,790 [wrapper] ==== pilot stdout END ====
[2026-01-12 18:52:57] 2026-01-12 17:52:57,791 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 18:52:57] 2026-01-12 17:52:57,792 [wrapper] pilotpid: 23043
[2026-01-12 18:52:57] 2026-01-12 17:52:57,793 [wrapper] Pilot exit status: 0
[2026-01-12 18:52:57] 2026-01-12 17:52:57,797 [wrapper] pandaids: 6967000957
[2026-01-12 18:52:57] 2026-01-12 17:52:57,817 [wrapper] cleanup supervisor_pilot 10031 23044
[2026-01-12 18:52:57] 2026-01-12 17:52:57,818 [wrapper] Test setup, not cleaning
[2026-01-12 18:52:57] 2026-01-12 17:52:57,819 [wrapper] apfmon messages muted
[2026-01-12 18:52:57] 2026-01-12 17:52:57,821 [wrapper] ==== wrapper stdout END ====
[2026-01-12 18:52:57] 2026-01-12 17:52:57,822 [wrapper] ==== wrapper stderr END ====
[2026-01-12 18:52:57]  *** Error codes and diagnostics ***
[2026-01-12 18:52:57]     "exeErrorCode": 0,
[2026-01-12 18:52:57]     "exeErrorDiag": "",
[2026-01-12 18:52:57]     "pilotErrorCode": 0,
[2026-01-12 18:52:57]     "pilotErrorDiag": "",
[2026-01-12 18:52:57]  *** Listing of results directory ***
[2026-01-12 18:52:57] total 592064
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user    579449 Jan 12 14:15 pilot3.tar.gz
[2026-01-12 18:52:57] -rwx------ 1 mf493845 unix-user     36322 Jan 12 14:24 runpilot2-wrapper.sh
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      5112 Jan 12 14:24 queuedata.json
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       100 Jan 12 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 18:52:57] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 12 16:18 run_atlas
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       105 Jan 12 16:18 job.xml
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 12 17:39 start_atlas.sh
[2026-01-12 18:52:57] drwxrwx--x 2 mf493845 unix-user       100 Jan 12 17:39 shared
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user    592409 Jan 12 17:39 input.tar.gz
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      6389 Jan 12 17:39 init_data.xml
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user 316977691 Jan 12 17:39 EVNT.48188559._000002.pool.root.1
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user         0 Jan 12 17:39 boinc_setup_complete
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      8192 Jan 12 17:39 boinc_mmap_file
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user         0 Jan 12 17:39 boinc_lockfile
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      2631 Jan 12 17:39 pandaJob.out
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user    988542 Jan 12 17:39 agis_schedconf.cvmfs.json
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user   1516240 Jan 12 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-12 18:52:57] drwx------ 5 mf493845 unix-user       440 Jan 12 17:39 pilot3
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user 283322128 Jan 12 18:51 HITS.48188564._000045.pool.root.1
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user        95 Jan 12 18:52 pilot_heartbeat.json
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      1019 Jan 12 18:52 memory_monitor_summary.json
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user    380539 Jan 12 18:52 log.48188564._000045.job.log.tgz.1
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      7764 Jan 12 18:52 heartbeat.json
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       745 Jan 12 18:52 pilotlog.txt
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user    665061 Jan 12 18:52 log.48188564._000045.job.log.1
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       357 Jan 12 18:52 output.list
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       620 Jan 12 18:52 runtime_log
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user   1064960 Jan 12 18:52 result.tar.gz
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user      9220 Jan 12 18:52 runtime_log.err
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user       644 Jan 12 18:52 iQjKDmi5Wz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgfnKDm8f0EZm.diag
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user     22308 Jan 12 18:52 stderr.txt
[2026-01-12 18:52:57] HITS file was successfully produced:
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user 283322128 Jan 12 18:51 shared/HITS.pool.root.1
[2026-01-12 18:52:57]  *** Contents of shared directory: ***
[2026-01-12 18:52:57] total 587872
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 12 17:39 start_atlas.sh
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user    592409 Jan 12 17:39 input.tar.gz
[2026-01-12 18:52:57] -rw-r--r-- 2 mf493845 unix-user 316977691 Jan 12 17:39 ATLAS.root_0
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user 283322128 Jan 12 18:51 HITS.pool.root.1
[2026-01-12 18:52:57] -rw------- 1 mf493845 unix-user   1064960 Jan 12 18:52 result.tar.gz
18:52:59 (19300): run_atlas exited; CPU time 27463.474427
18:52:59 (19300): called boinc_finish(0)

</stderr_txt>
]]>

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