Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-12 09:06:43 (14532): vboxwrapper version 26210
2026-01-12 09:06:43 (14532): BOINC client version: 8.2.4
2026-01-12 09:06:56 (14532): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-01-12 09:06:56 (14532): Successfully copied 'init_data.xml' to the shared directory.
2026-01-12 09:06:57 (14532): Create VM. (boinc_d61ca5ab93fc4c48, slot#11)
2026-01-12 09:06:58 (14532): Setting Memory Size for VM. (4600MB)
2026-01-12 09:06:58 (14532): Setting CPU Count for VM. (6)
2026-01-12 09:06:58 (14532): Setting Chipset Options for VM.
2026-01-12 09:06:59 (14532): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-12 09:06:59 (14532): Setting Boot Options for VM.
2026-01-12 09:06:59 (14532): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-12 09:07:00 (14532): Enabling VM Network Access.
2026-01-12 09:07:00 (14532): Disabling USB Support for VM.
2026-01-12 09:07:00 (14532): Disabling COM Port Support for VM.
2026-01-12 09:07:01 (14532): Disabling LPT Port Support for VM.
2026-01-12 09:07:01 (14532): Disabling Audio Support for VM.
2026-01-12 09:07:01 (14532): Disabling Clipboard Support for VM.
2026-01-12 09:07:01 (14532): Disabling Drag and Drop Support for VM.
2026-01-12 09:07:02 (14532): Adding storage controller(s) to VM.
2026-01-12 09:07:02 (14532): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-12 09:07:04 (14532): Adding VirtualBox Guest Additions to VM.
2026-01-12 09:07:05 (14532): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-12 09:07:05 (14532): forwarding host port 61134 to guest port 80
2026-01-12 09:07:06 (14532): Enabling remote desktop for VM.
2026-01-12 09:07:06 (14532): Required extension pack not installed, remote desktop not enabled.
2026-01-12 09:07:06 (14532): Enabling shared directory for VM.
2026-01-12 09:07:06 (14532): Starting VM using VBoxManage interface. (boinc_d61ca5ab93fc4c48, slot#11)
2026-01-12 09:07:36 (14532): Successfully started VM. (PID = '17160')
2026-01-12 09:07:36 (14532): Reporting VM Process ID to BOINC.
2026-01-12 09:07:36 (14532): Guest Log: BIOS: VirtualBox 6.1.34
2026-01-12 09:07:36 (14532): Guest Log: CPUID EDX: 0x178bfbff
2026-01-12 09:07:36 (14532): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-12 09:07:36 (14532): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-12 09:07:36 (14532): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-12 09:07:36 (14532): Detected: Web Application Enabled (http://localhost:61134)
2026-01-12 09:07:36 (14532): Preference change detected
2026-01-12 09:07:36 (14532): Setting CPU throttle for VM. (100%)
2026-01-12 09:07:36 (14532): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-12 09:07:38 (14532): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-12 09:07:38 (14532): Guest Log: BIOS: Booting from Hard Disk...
2026-01-12 09:08:03 (14532): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-12 09:08:03 (14532): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-12 09:08:03 (14532): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-12 09:08:17 (14532): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-12 09:08:17 (14532): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-12 09:08:44 (14532): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000230 main     Log opened 2026-01-12T09:08:42.564602000Z
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000388 main     OS Product: Linux
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000435 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000476 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000518 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000519 main     Process ID: 1315
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.000520 main     Package type: LINUX_64BITS_GENERIC
2026-01-12 09:08:44 (14532): Guest Log: 00:00:00.001881 main     5.2.32 r132073 started. Verbose level = 0
2026-01-12 09:08:44 (14532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-12 09:08:44 (14532): Guest Log: [INFO] Mounting shared directory
2026-01-12 09:08:44 (14532): Guest Log: [INFO] Checking for init_data.xml
2026-01-12 09:08:54 (14532): Guest Log: 00:00:10.005812 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 943 137 000ns (GuestNow=1 768 226 933 512 618 000 ns GuestLast=1 768 208 922 569 481 000 ns fSetTimeLastLoop=true )
2026-01-12 09:09:02 (14532): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-12 09:09:02 (14532): Guest Log: [INFO] Detected branch: prod
2026-01-12 09:09:02 (14532): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-12 09:09:02 (14532): Guest Log: Copying input files
2026-01-12 09:09:05 (14532): Guest Log: Copied input files into RunAtlas.
2026-01-12 09:09:06 (14532): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-12 09:09:06 (14532): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-12 09:09:06 (14532): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-12 09:09:06 (14532): Guest Log: Further information can be found at the LHC@home message board.
2026-01-12 09:09:59 (14532): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-12 09:10:00 (14532): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-12 09:10:00 (14532): Guest Log: 2.6.3.0 1599 1 32092 155054 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-12 09:10:03 (14532): Guest Log: copied the webapp to /var/www
2026-01-12 09:10:03 (14532): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-12 09:10:03 (14532): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-12 09:10:04 (14532): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-12 09:10:04 (14532): Guest Log:  *** Starting ATLAS job. (PandaID=6967001119 taskID=48188564) ***
2026-01-12 09:19:48 (14532): Guest Log:  *** Job finished ***
2026-01-12 09:19:48 (14532): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:35,312 | INFO     | all workflow threads have been joined
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:35,312 | INFO     | end of generic workflow (traces error code: 0)
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:35,313 | INFO     | traces error code: 0
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:35,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,993 | INFO     | PID=6033 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,994 | INFO     | found 0 job(s) in 20 queues
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:46,995 | INFO     | [monitor] control thread has ended
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,170 [wrapper] ==== pilot stdout END ====
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,183 [wrapper] ==== wrapper stdout RESUME ====
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,196 [wrapper] pilotpid: 6033
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,208 [wrapper] Pilot exit status: 0
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,358 [wrapper] pandaids: 6967001119
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,430 [wrapper] cleanup supervisor_pilot  6039 6034
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,444 [wrapper] Test setup, not cleaning
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,456 [wrapper] apfmon messages muted
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,470 [wrapper] ==== wrapper stdout END ====
2026-01-12 09:19:48 (14532): Guest Log: 2026-01-12 14:19:47,484 [wrapper] ==== wrapper stderr END ====
2026-01-12 09:19:48 (14532): Guest Log:  *** Error codes and diagnostics ***
2026-01-12 09:19:48 (14532): Guest Log:     "exeErrorCode": 65,
2026-01-12 09:19:48 (14532): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-01-12 09:19:48 (14532): Guest Log:     "pilotErrorCode": 1305,
2026-01-12 09:19:48 (14532): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-01-12 09:19:48 (14532): Guest Log:  *** Listing of results directory ***
2026-01-12 09:19:48 (14532): Guest Log: total 4160
2026-01-12 09:19:48 (14532): Guest Log: -rw-r--r--. 1 atlas atlas  579449 Jan 12 13:15 pilot3.tar.gz
2026-01-12 09:19:48 (14532): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jan 12 13:24 queuedata.json
2026-01-12 09:19:48 (14532): Guest Log: -rwx------. 1 atlas atlas   36322 Jan 12 13:28 runpilot2-wrapper.sh
2026-01-12 09:19:48 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas   15847 Jan 12 14:09 start_atlas.sh
2026-01-12 09:19:48 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas  592408 Jan 12 14:09 input.tar.gz
2026-01-12 09:19:48 (14532): Guest Log: -rwxr-xr-x. 1 atlas atlas    5648 Jan 12 14:09 init_data.xml
2026-01-12 09:19:48 (14532): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jan 12 14:09 EVNT.48188559._000009.pool.root.1 -> /data/./ATLAS.root_0
2026-01-12 09:19:48 (14532): Guest Log: -rw-r--r--. 1 atlas atlas    2633 Jan 12 14:10 pandaJob.out
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas  986112 Jan 12 14:11 agis_schedconf.cvmfs.json
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas 1516240 Jan 12 14:11 agis_ddmendpoints.agis.ALL.json
2026-01-12 09:19:48 (14532): Guest Log: drwx------. 5 atlas atlas    4096 Jan 12 14:11 pilot3
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas   49214 Jan 12 14:17 log.48188564._000207.job.log.tgz.1
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas    8054 Jan 12 14:19 heartbeat.json
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas      95 Jan 12 14:19 pilot_heartbeat.json
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas     744 Jan 12 14:19 pilotlog.txt
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas  167756 Jan 12 14:19 log.48188564._000207.job.log.1
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas     188 Jan 12 14:19 output.list
2026-01-12 09:19:48 (14532): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jan 12 14:19 runtime_log
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas  235520 Jan 12 14:19 result.tar.gz
2026-01-12 09:19:48 (14532): Guest Log: -rw-------. 1 atlas atlas     656 Jan 12 14:19 WRhLDmp8Wz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNxhKDmtTCNIm.diag
2026-01-12 09:19:48 (14532): Guest Log: -rw-r--r--. 1 atlas atlas    8632 Jan 12 14:19 runtime_log.err
2026-01-12 09:19:48 (14532): Guest Log: Looking for outputfile HITS.48188564._000207.pool.root.1
2026-01-12 09:19:48 (14532): Guest Log: No HITS file was produced
2026-01-12 09:19:48 (14532): Guest Log: Successfully finished the ATLAS job!
2026-01-12 09:19:48 (14532): Guest Log: Copying the results back to the shared directory!
2026-01-12 09:19:48 (14532): Guest Log:  *** Contents of shared directory: ***
2026-01-12 09:19:48 (14532): Guest Log: total 311896
2026-01-12 09:19:48 (14532): Guest Log: -rwxrwxrwx. 1 root root 318523182 Jan 12 14:06 ATLAS.root_0
2026-01-12 09:19:48 (14532): Guest Log: -rwxrwxrwx. 1 root root      5648 Jan 12 14:06 init_data.xml
2026-01-12 09:19:48 (14532): Guest Log: -rwxrwxrwx. 1 root root    592408 Jan 12 13:36 input.tar.gz
2026-01-12 09:19:48 (14532): Guest Log: -rwxrwxrwx. 1 root root    235520 Jan 12 14:19 result.tar.gz
2026-01-12 09:19:48 (14532): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 12 13:36 start_atlas.sh
2026-01-12 09:19:48 (14532): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-12 09:19:48 (14532): VM Completion File Detected.
2026-01-12 09:19:48 (14532): Powering off VM.
2026-01-12 09:19:50 (14532): Successfully stopped VM.
2026-01-12 09:19:50 (14532): Deregistering VM. (boinc_d61ca5ab93fc4c48, slot#11)
2026-01-12 09:19:50 (14532): Removing network bandwidth throttle group from VM.
2026-01-12 09:19:50 (14532): Removing VM from VirtualBox.
2026-01-12 09:19:55 (14532): called boinc_finish(0)

</stderr_txt>
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