Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:07:03 (2927205): wrapper (7.7.26015): starting
16:07:03 (2927205): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 16:07:03] Arguments: --nthreads 4
[2026-01-12 16:07:03] Threads: 4
[2026-01-12 16:07:03] Checking for CVMFS
[2026-01-12 16:07:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 16:07:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 16:07:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 16:07:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 16:07:03] 2.9.2.0 2899326 96 51584 155056 3 9 19790164 36864000 0 130560 0 71312 99.975 5531 31073 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 16:07:03] CVMFS is ok
[2026-01-12 16:07:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 16:07:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 16:07:03] Further information can be found at the LHC@home message board.
[2026-01-12 16:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 16:07:03] Checking for apptainer binary...
[2026-01-12 16:07:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 16:07:03] Running /usr/bin/apptainer --version
[2026-01-12 16:07:03] apptainer version 1.4.1-1.1
[2026-01-12 16:07:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 16:07:03] thA350a
[2026-01-12 16:07:03] apptainer works
[2026-01-12 16:07:03] Set ATHENA_PROC_NUMBER=4
[2026-01-12 16:07:03] Set ATHENA_CORE_NUMBER=4
[2026-01-12 16:07:03] Starting ATLAS job with PandaID=6967001120
[2026-01-12 16:07:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:48:41]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:48:41]  protocol_id=None
[2026-01-12 17:48:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-12 17:48:41]  replicas=None
[2026-01-12 17:48:41]  scope=mc23_13p6TeV
[2026-01-12 17:48:41]  status=None
[2026-01-12 17:48:41]  status_code=0
[2026-01-12 17:48:41]  storage_token=
[2026-01-12 17:48:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6967001120/log.48188564._000208.job.log.tgz.1
[2026-01-12 17:48:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/43/log.48188564._000208.job.log.tgz.1
[2026-01-12 17:48:41]  workdir=None
[2026-01-12 17:48:41] ]
[2026-01-12 17:48:41] 2026-01-12 16:48:01,438 | INFO     | transferring file log.48188564._000208.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6967001120/log.48188564._000208.job.log.tgz.1 to /local/data/boinc/
[2026-01-12 17:48:41] 2026-01-12 16:48:01,438 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6967001120/log.48188564._000208.job.log.tgz.1 /local/data/boinc/slots/0/log.48188564._0002
[2026-01-12 17:48:41] 2026-01-12 16:48:01,456 | INFO     | adding to output.list: log.48188564._000208.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/43/log.48188564._000208.job.log.tg
[2026-01-12 17:48:41] 2026-01-12 16:48:01,456 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 17:48:41] 2026-01-12 16:48:01,456 | INFO     | summary of transferred files:
[2026-01-12 17:48:41] 2026-01-12 16:48:01,456 | INFO     |  -- lfn=log.48188564._000208.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 17:48:41] 2026-01-12 16:48:01,456 | INFO     | stage-out finished correctly
[2026-01-12 17:48:41] 2026-01-12 16:48:01,899 | INFO     | time since job start (6051s) is within the limit (349056.0s)
[2026-01-12 17:48:41] 2026-01-12 16:48:03,701 | INFO     | monitor loop #465: job 0:6967001120 is in state 'finished'
[2026-01-12 17:48:41] 2026-01-12 16:48:03,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:48:41] 2026-01-12 16:48:03,904 | INFO     | time since job start (6053s) is within the limit (349056.0s)
[2026-01-12 17:48:41] 2026-01-12 16:48:04,885 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 17:48:41] 2026-01-12 16:48:05,274 | INFO     | job 6967001120 has state=finished
[2026-01-12 17:48:41] 2026-01-12 16:48:05,274 | INFO     | preparing for final server update for job 6967001120 in state='finished'
[2026-01-12 17:48:41] 2026-01-12 16:48:05,275 | INFO     | this job has now completed (state=finished)
[2026-01-12 17:48:41] 2026-01-12 16:48:05,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 17:48:41] 2026-01-12 16:48:05,275 | INFO     | log transfer has been attempted: DONE
[2026-01-12 17:48:41] 2026-01-12 16:48:05,275 | INFO     | job 6967001120 has finished - writing final server update
[2026-01-12 17:48:41] 2026-01-12 16:48:05,275 | INFO     | total number of processed events: 400 (read)
[2026-01-12 17:48:41] 2026-01-12 16:48:05,276 | INFO     | executing command: lscpu
[2026-01-12 17:48:41] 2026-01-12 16:48:05,295 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 17:48:41] 2026-01-12 16:48:05,915 | INFO     | time since job start (6055s) is within the limit (349056.0s)
[2026-01-12 17:48:41] 2026-01-12 16:48:06,204 | INFO     | monitor loop #466: job 0:6967001120 is in state 'finished'
[2026-01-12 17:48:41] 2026-01-12 16:48:06,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:48:41] 2026-01-12 16:48:07,921 | INFO     | time since job start (6057s) is within the limit (349056.0s)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,423 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 17:48:41] 2026-01-12 16:48:08,424 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3575.792625
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6967001120/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | INFO     | extracted standard info from prmon json
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 17:48:41] 2026-01-12 16:48:08,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 17:48:41] 2026-01-12 16:48:08,427 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:48:41] 2026-01-12 16:48:08,427 | INFO     | sum of square deviations: 241429643.0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | sum of deviations: -308077937.99999964
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | mean x: 1768233533.5
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | mean y: 2446366.1304347827
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | intersect: 2258812792.945444
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | chi2: 0.03359815107649249
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | current memory leak: -1.28 B/s (using 92 data points, chi2=0.03)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | could have reported an average CPU frequency of 3701 MHz (7 samples)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | ..............................
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . Timing measurements:
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . get job = 0 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . initial setup = 1 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . payload setup = 4 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . stage-in = 0 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . payload execution = 6028 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . stage-out = 0 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | . log creation = 0 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,428 | INFO     | ..............................
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | 
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | job summary report
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | --------------------------------------------------
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | PanDA job id: 6967001120
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | task id: 48188564
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | errors: (none)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | pilot state: finished 
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | transexitcode: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | exeerrorcode: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | exeerrordiag: 
[2026-01-12 17:48:41] 2026-01-12 16:48:08,468 | INFO     | exitcode: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | exitmsg: OK
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | cpuconsumptiontime: 23107 s
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | nevents: 400
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | neventsw: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | pid: 2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | pgrp: 2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | corecount: 4
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | event service: False
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | sizes: {0: 2283961, 1: 2284160, 4: 2284422, 11: 2284450, 6036: 2311381, 6037: 2320385, 6040: 2320569, 6044: 2320763}
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | --------------------------------------------------
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | 
[2026-01-12 17:48:41] 2026-01-12 16:48:08,469 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | job 6967001120 has completed (purged errors)
[2026-01-12 17:48:41] 2026-01-12 16:48:08,488 | INFO     | overall cleanup function is called
[2026-01-12 17:48:41] 2026-01-12 16:48:08,981 | INFO     | PID=2931002 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 17:48:41] 2026-01-12 16:48:09,495 | INFO     | --- collectZombieJob: --- 10, [2937570]
[2026-01-12 17:48:41] 2026-01-12 16:48:09,495 | INFO     | zombie collector waiting for pid 2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:09,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:48:41] 2026-01-12 16:48:09,495 | INFO     | collected zombie processes
[2026-01-12 17:48:41] 2026-01-12 16:48:09,495 | INFO     | will attempt to kill all subprocesses of pid=2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:09,537 | INFO     | process IDs to be killed: [2937570] (in reverse order)
[2026-01-12 17:48:41] 2026-01-12 16:48:09,568 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:48:41] 2026-01-12 16:48:09,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:48:41] 2026-01-12 16:48:09,570 | INFO     | did not find any defunct processes belonging to 2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:09,571 | INFO     | did not find any defunct processes belonging to 2937570
[2026-01-12 17:48:41] 2026-01-12 16:48:09,571 | INFO     | ready for new job
[2026-01-12 17:48:41] 2026-01-12 16:48:09,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:48:41] 2026-01-12 16:48:09,572 | INFO     | ***************************************
[2026-01-12 17:48:41] 2026-01-12 16:48:09,572 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:48:41] 2026-01-12 16:48:09,572 | INFO     | ***************************************
[2026-01-12 17:48:41] 2026-01-12 16:48:09,572 | INFO     | 
[2026-01-12 17:48:41] 2026-01-12 16:48:09,573 | INFO     | architecture information:
[2026-01-12 17:48:41] 2026-01-12 16:48:09,573 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:48:41] 2026-01-12 16:48:09,586 | INFO     | cat /etc/os-release:
[2026-01-12 17:48:41] NAME="CentOS Linux"
[2026-01-12 17:48:41] VERSION="7 (Core)"
[2026-01-12 17:48:41] ID="centos"
[2026-01-12 17:48:41] ID_LIKE="rhel fedora"
[2026-01-12 17:48:41] VERSION_ID="7"
[2026-01-12 17:48:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:48:41] ANSI_COLOR="0;31"
[2026-01-12 17:48:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:48:41] HOME_URL="https://www.centos.org/"
[2026-01-12 17:48:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:48:41] 
[2026-01-12 17:48:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:48:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:48:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:48:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:48:41] 
[2026-01-12 17:48:41] 2026-01-12 16:48:09,586 | INFO     | ***************************************
[2026-01-12 17:48:41] 2026-01-12 16:48:10,089 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | INFO     | sufficient remaining disk space (240140681216 B)
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | INFO     | update_server=False
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:48:41] 2026-01-12 16:48:10,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:48:41] 2026-01-12 16:48:10,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:48:41] 2026-01-12 16:48:10,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:48:41] 2026-01-12 16:48:10,107 | INFO     | aborting loop
[2026-01-12 17:48:41] 2026-01-12 16:48:10,207 | INFO     | all payload control threads have been joined
[2026-01-12 17:48:41] 2026-01-12 16:48:10,623 | INFO     | all job control threads have been joined
[2026-01-12 17:48:41] 2026-01-12 16:48:10,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:48:41] 2026-01-12 16:48:11,033 | INFO     | all data control threads have been joined
[2026-01-12 17:48:41] 2026-01-12 16:48:11,112 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,112 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,113 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,213 | INFO     | [payload] control thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,392 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,628 | INFO     | [job] control thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:11,821 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,038 | INFO     | [data] control thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,113 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,178 | INFO     | [job] validate thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,286 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,286 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,524 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:12,564 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:14,940 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:17,444 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:48:41] 2026-01-12 16:48:20,604 | INFO     | job.realtimelogging is not enabled
[2026-01-12 17:48:41] 2026-01-12 16:48:21,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:48:41] 2026-01-12 16:48:23,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645739964224)>', '<ExcThread(monitor, started 139644880545536)>']
[2026-01-12 17:48:41] 2026-01-12 16:48:28,296 | INFO     | all workflow threads have been joined
[2026-01-12 17:48:41] 2026-01-12 16:48:28,296 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:48:41] 2026-01-12 16:48:28,296 | INFO     | traces error code: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:28,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:48:41] 2026-01-12 16:48:41,094 | INFO     | PID=2931002 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | CRITICAL | thread 'MainThread' is not alive
[2026-01-12 17:48:41] 2026-01-12 16:48:41,095 | INFO     | [monitor] control thread has ended
[2026-01-12 17:48:41] 2026-01-12 16:48:41,171 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:48:41] 2026-01-12 16:48:41,176 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:48:41] 2026-01-12 16:48:41,179 [wrapper] pilotpid: 2931002
[2026-01-12 17:48:41] 2026-01-12 16:48:41,183 [wrapper] Pilot exit status: 0
[2026-01-12 17:48:41] 2026-01-12 16:48:41,194 [wrapper] pandaids: 6967001120
[2026-01-12 17:48:41] 2026-01-12 16:48:41,214 [wrapper] cleanup supervisor_pilot 2949978 2931003
[2026-01-12 17:48:41] 2026-01-12 16:48:41,218 [wrapper] Test setup, not cleaning
[2026-01-12 17:48:41] 2026-01-12 16:48:41,222 [wrapper] apfmon messages muted
[2026-01-12 17:48:41] 2026-01-12 16:48:41,225 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:48:41] 2026-01-12 16:48:41,229 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:48:41]  *** Error codes and diagnostics ***
[2026-01-12 17:48:41]     "exeErrorCode": 0,
[2026-01-12 17:48:41]     "exeErrorDiag": "",
[2026-01-12 17:48:41]     "pilotErrorCode": 0,
[2026-01-12 17:48:41]     "pilotErrorDiag": "",
[2026-01-12 17:48:41]  *** Listing of results directory ***
[2026-01-12 17:48:41] total 607420
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc    579449 Jan 12 14:15 pilot3.tar.gz
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc      5112 Jan 12 14:24 queuedata.json
[2026-01-12 17:48:41] -rwx------ 1 boinc boinc     36322 Jan 12 14:28 runpilot2-wrapper.sh
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc       100 Jan 12 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:48:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 16:07 run_atlas
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc       105 Jan 12 16:07 job.xml
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc 318523182 Jan 12 16:07 EVNT.48188559._000009.pool.root.1
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc    592409 Jan 12 16:07 input.tar.gz
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc     15847 Jan 12 16:07 start_atlas.sh
[2026-01-12 17:48:41] drwxrwx--x 2 boinc boinc      4096 Jan 12 16:07 shared
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc         0 Jan 12 16:07 boinc_setup_complete
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc      6377 Jan 12 16:07 init_data.xml
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc         0 Jan 12 16:07 boinc_lockfile
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc      2633 Jan 12 16:07 pandaJob.out
[2026-01-12 17:48:41] -rw------- 1 boinc boinc    986112 Jan 12 16:07 agis_schedconf.cvmfs.json
[2026-01-12 17:48:41] -rw------- 1 boinc boinc   1516240 Jan 12 16:07 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:48:41] drwx------ 5 boinc boinc      4096 Jan 12 16:07 pilot3
[2026-01-12 17:48:41] -rw------- 1 boinc boinc 297162229 Jan 12 17:47 HITS.48188564._000208.pool.root.1
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc       529 Jan 12 17:47 boinc_task_state.xml
[2026-01-12 17:48:41] -rw------- 1 boinc boinc      1021 Jan 12 17:47 memory_monitor_summary.json
[2026-01-12 17:48:41] -rw------- 1 boinc boinc    324762 Jan 12 17:48 log.48188564._000208.job.log.tgz.1
[2026-01-12 17:48:41] -rw------- 1 boinc boinc      7746 Jan 12 17:48 heartbeat.json
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc      8192 Jan 12 17:48 boinc_mmap_file
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc        27 Jan 12 17:48 wrapper_checkpoint.txt
[2026-01-12 17:48:41] -rw------- 1 boinc boinc       817 Jan 12 17:48 pilotlog.txt
[2026-01-12 17:48:41] -rw------- 1 boinc boinc        95 Jan 12 17:48 pilot_heartbeat.json
[2026-01-12 17:48:41] -rw------- 1 boinc boinc    879061 Jan 12 17:48 log.48188564._000208.job.log.1
[2026-01-12 17:48:41] -rw------- 1 boinc boinc       357 Jan 12 17:48 output.list
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc       620 Jan 12 17:48 runtime_log
[2026-01-12 17:48:41] -rw------- 1 boinc boinc   1218560 Jan 12 17:48 result.tar.gz
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc      8902 Jan 12 17:48 runtime_log.err
[2026-01-12 17:48:41] -rw------- 1 boinc boinc       660 Jan 12 17:48 0iiLDmp8Wz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOxhKDmb4VYIm.diag
[2026-01-12 17:48:41] -rw-r--r-- 1 boinc boinc     21896 Jan 12 17:48 stderr.txt
[2026-01-12 17:48:41] HITS file was successfully produced:
[2026-01-12 17:48:41] -rw------- 1 boinc boinc 297162229 Jan 12 17:47 shared/HITS.pool.root.1
[2026-01-12 17:48:41]  *** Contents of shared directory: ***
[2026-01-12 17:48:41] total 603056
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc 318523182 Jan 12 16:07 ATLAS.root_0
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc    592409 Jan 12 16:07 input.tar.gz
[2026-01-12 17:48:41] -rw-r--r-- 2 boinc boinc     15847 Jan 12 16:07 start_atlas.sh
[2026-01-12 17:48:41] -rw------- 1 boinc boinc 297162229 Jan 12 17:47 HITS.pool.root.1
[2026-01-12 17:48:41] -rw------- 1 boinc boinc   1218560 Jan 12 17:48 result.tar.gz
17:48:42 (2927205): run_atlas exited; CPU time 23127.197446
17:48:42 (2927205): called boinc_finish(0)

</stderr_txt>
]]>

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