Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:32:01 (1370303): wrapper (7.7.26015): starting
23:32:01 (1370303): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 23:32:01] Arguments: --nthreads 4
[2026-01-12 23:32:01] Threads: 4
[2026-01-12 23:32:01] Checking for CVMFS
[2026-01-12 23:32:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 23:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 23:32:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 23:32:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 23:32:01] 2.9.2.0 1278731 555 65552 155068 1 57 22184918 36864000 0 130560 0 249794 99.978 21995 15127 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 23:32:01] CVMFS is ok
[2026-01-12 23:32:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 23:32:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 23:32:01] Further information can be found at the LHC@home message board.
[2026-01-12 23:32:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 23:32:01] Checking for apptainer binary...
[2026-01-12 23:32:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 23:32:01] Running /usr/bin/apptainer --version
[2026-01-12 23:32:01] apptainer version 1.4.1-1.1
[2026-01-12 23:32:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 23:32:01] atlasA139
[2026-01-12 23:32:01] apptainer works
[2026-01-12 23:32:01] Set ATHENA_PROC_NUMBER=4
[2026-01-12 23:32:01] Set ATHENA_CORE_NUMBER=4
[2026-01-12 23:32:01] Starting ATLAS job with PandaID=6966979472
[2026-01-12 23:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:38:19]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:38:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-13 00:38:19]  replicas=None
[2026-01-13 00:38:19]  scope=mc23_13p6TeV
[2026-01-13 00:38:19]  status=None
[2026-01-13 00:38:19]  status_code=0
[2026-01-13 00:38:19]  storage_token=
[2026-01-13 00:38:19]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6966979472/log.48188456._000233.job.log.tgz.1
[2026-01-13 00:38:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/3d/log.48188456._000233.job.log.tgz.1
[2026-01-13 00:38:19]  workdir=None
[2026-01-13 00:38:19] ]
[2026-01-13 00:38:19] 2026-01-12 23:37:35,227 | INFO     | transferring file log.48188456._000233.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6966979472/log.48188456._000233.job.log.tgz.1 to /local/data/boinc/
[2026-01-13 00:38:19] 2026-01-12 23:37:35,227 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6966979472/log.48188456._000233.job.log.tgz.1 /local/data/boinc/slots/0/log.48188456._0002
[2026-01-13 00:38:19] 2026-01-12 23:37:35,245 | INFO     | adding to output.list: log.48188456._000233.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/3d/log.48188456._000233.job.log.tg
[2026-01-13 00:38:19] 2026-01-12 23:37:35,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-13 00:38:19] 2026-01-12 23:37:35,246 | INFO     | summary of transferred files:
[2026-01-13 00:38:19] 2026-01-12 23:37:35,246 | INFO     |  -- lfn=log.48188456._000233.job.log.tgz.1, status_code=0, status=transferred
[2026-01-13 00:38:19] 2026-01-12 23:37:35,246 | INFO     | stage-out finished correctly
[2026-01-13 00:38:19] 2026-01-12 23:37:36,796 | INFO     | time since job start (3927s) is within the limit (349056.0s)
[2026-01-13 00:38:19] 2026-01-12 23:37:36,857 | WARNING  | process 1380700 can no longer be monitored (due to stat problems) - aborting
[2026-01-13 00:38:19] 2026-01-12 23:37:36,857 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6966979472/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:38:19] 2026-01-12 23:37:36,899 | INFO     | number of running child processes to parent process 1380700: 1
[2026-01-13 00:38:19] 2026-01-12 23:37:36,899 | INFO     | maximum number of monitored processes: 6
[2026-01-13 00:38:19] 2026-01-12 23:37:38,151 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 00:38:19] 2026-01-12 23:37:38,802 | INFO     | time since job start (3929s) is within the limit (349056.0s)
[2026-01-13 00:38:19] 2026-01-12 23:37:39,403 | INFO     | monitor loop #302: job 0:6966979472 is in state 'finished'
[2026-01-13 00:38:19] 2026-01-12 23:37:39,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:38:19] 2026-01-12 23:37:40,809 | INFO     | time since job start (3931s) is within the limit (349056.0s)
[2026-01-13 00:38:19] 2026-01-12 23:37:41,064 | INFO     | job 6966979472 has state=finished
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | preparing for final server update for job 6966979472 in state='finished'
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | this job has now completed (state=finished)
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | log transfer has been attempted: DONE
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | job 6966979472 has finished - writing final server update
[2026-01-13 00:38:19] 2026-01-12 23:37:41,065 | INFO     | total number of processed events: 400 (read)
[2026-01-13 00:38:19] 2026-01-12 23:37:41,066 | INFO     | executing command: lscpu
[2026-01-13 00:38:19] 2026-01-12 23:37:41,087 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 00:38:19] 2026-01-12 23:37:41,906 | INFO     | monitor loop #303: job 0:6966979472 is in state 'finished'
[2026-01-13 00:38:19] 2026-01-12 23:37:41,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:38:19] 2026-01-12 23:37:42,815 | INFO     | time since job start (3933s) is within the limit (349056.0s)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,331 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 00:38:19] 2026-01-12 23:37:44,333 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3447.4258125
[2026-01-13 00:38:19] 2026-01-12 23:37:44,334 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6966979472/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,335 | INFO     | extracted standard info from prmon json
[2026-01-13 00:38:19] 2026-01-12 23:37:44,335 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:38:19] 2026-01-12 23:37:44,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:38:19] 2026-01-12 23:37:44,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 00:38:19] 2026-01-12 23:37:44,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | sum of square deviations: 57407588.0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | sum of deviations: -7786347928.0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | mean x: 1768259165.0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | mean y: 2604999.543859649
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | intersect: 239836424277.31528
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | chi2: 0.06990610156141185
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | current memory leak: -135.63 B/s (using 57 data points, chi2=0.07)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | could have reported an average CPU frequency of 3633 MHz (6 samples)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | ..............................
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . Timing measurements:
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . get job = 0 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . initial setup = 1 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . payload setup = 4 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . stage-in = 0 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . payload execution = 3902 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,336 | INFO     | . stage-out = 0 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,337 | INFO     | . log creation = 0 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,337 | INFO     | ..............................
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | 
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | job summary report
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | --------------------------------------------------
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | PanDA job id: 6966979472
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | task id: 48188456
[2026-01-13 00:38:19] 2026-01-12 23:37:44,375 | INFO     | errors: (none)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | pilot state: finished 
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | transexitcode: 0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | exeerrorcode: 0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | exeerrordiag: 
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | exitcode: 0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | exitmsg: OK
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | cpuconsumptiontime: 14553 s
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | nevents: 400
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | neventsw: 0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | pid: 1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | pgrp: 1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | corecount: 4
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | event service: False
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | sizes: {0: 2284115, 1: 2284115, 4: 2284405, 11: 2284433, 3910: 2310392, 3912: 2319396, 3915: 2319580, 3921: 2319774}
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | --------------------------------------------------
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | 
[2026-01-13 00:38:19] 2026-01-12 23:37:44,376 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-13 00:38:19] 2026-01-12 23:37:44,393 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,393 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,393 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | job 6966979472 has completed (purged errors)
[2026-01-13 00:38:19] 2026-01-12 23:37:44,394 | INFO     | overall cleanup function is called
[2026-01-13 00:38:19] 2026-01-12 23:37:45,401 | INFO     | --- collectZombieJob: --- 10, [1380700]
[2026-01-13 00:38:19] 2026-01-12 23:37:45,401 | INFO     | zombie collector waiting for pid 1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:45,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:38:19] 2026-01-12 23:37:45,401 | INFO     | collected zombie processes
[2026-01-13 00:38:19] 2026-01-12 23:37:45,401 | INFO     | will attempt to kill all subprocesses of pid=1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:45,447 | INFO     | process IDs to be killed: [1380700] (in reverse order)
[2026-01-13 00:38:19] 2026-01-12 23:37:45,482 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:38:19] 2026-01-12 23:37:45,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:38:19] 2026-01-12 23:37:45,484 | INFO     | did not find any defunct processes belonging to 1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:45,485 | INFO     | did not find any defunct processes belonging to 1380700
[2026-01-13 00:38:19] 2026-01-12 23:37:45,485 | INFO     | ready for new job
[2026-01-13 00:38:19] 2026-01-12 23:37:45,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:38:19] 2026-01-12 23:37:45,486 | INFO     | ***************************************
[2026-01-13 00:38:19] 2026-01-12 23:37:45,486 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:38:19] 2026-01-12 23:37:45,486 | INFO     | ***************************************
[2026-01-13 00:38:19] 2026-01-12 23:37:45,486 | INFO     | 
[2026-01-13 00:38:19] 2026-01-12 23:37:45,487 | INFO     | architecture information:
[2026-01-13 00:38:19] 2026-01-12 23:37:45,487 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:38:19] 2026-01-12 23:37:45,500 | INFO     | cat /etc/os-release:
[2026-01-13 00:38:19] NAME="CentOS Linux"
[2026-01-13 00:38:19] VERSION="7 (Core)"
[2026-01-13 00:38:19] ID="centos"
[2026-01-13 00:38:19] ID_LIKE="rhel fedora"
[2026-01-13 00:38:19] VERSION_ID="7"
[2026-01-13 00:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:38:19] ANSI_COLOR="0;31"
[2026-01-13 00:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:38:19] HOME_URL="https://www.centos.org/"
[2026-01-13 00:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:38:19] 
[2026-01-13 00:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:38:19] 
[2026-01-13 00:38:19] 2026-01-12 23:37:45,500 | INFO     | ***************************************
[2026-01-13 00:38:19] 2026-01-12 23:37:46,004 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | INFO     | sufficient remaining disk space (339425099776 B)
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | INFO     | update_server=False
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | INFO     | aborting loop
[2026-01-13 00:38:19] 2026-01-12 23:37:46,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:38:19] 2026-01-12 23:37:46,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:38:19] 2026-01-12 23:37:47,029 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,029 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,030 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,122 | INFO     | all data control threads have been joined
[2026-01-13 00:38:19] 2026-01-12 23:37:47,324 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,328 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,426 | INFO     | all payload control threads have been joined
[2026-01-13 00:38:19] 2026-01-12 23:37:47,601 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,627 | INFO     | all job control threads have been joined
[2026-01-13 00:38:19] 2026-01-12 23:37:47,654 | INFO     | [job] validate thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,688 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,825 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:47,985 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,029 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,127 | INFO     | [data] control thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,210 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,431 | INFO     | [payload] control thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,633 | INFO     | [job] control thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:37:48,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:38:19] 2026-01-12 23:37:52,711 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:38:19] 2026-01-12 23:38:13,163 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:38:19] 2026-01-12 23:38:14,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430617552704)>', '<ExcThread(monitor, started 140429810964224)>']
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | INFO     | PID=1374108 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:38:19] 2026-01-12 23:38:15,964 | INFO     | [monitor] control thread has ended
[2026-01-13 00:38:19] 2026-01-12 23:38:19,122 | INFO     | all workflow threads have been joined
[2026-01-13 00:38:19] 2026-01-12 23:38:19,123 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:38:19] 2026-01-12 23:38:19,123 | INFO     | traces error code: 0
[2026-01-13 00:38:19] 2026-01-12 23:38:19,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:38:19] 2026-01-12 23:38:19,194 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:38:19] 2026-01-12 23:38:19,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:38:19] 2026-01-12 23:38:19,202 [wrapper] pilotpid: 1374108
[2026-01-13 00:38:19] 2026-01-12 23:38:19,206 [wrapper] Pilot exit status: 0
[2026-01-13 00:38:19] 2026-01-12 23:38:19,217 [wrapper] pandaids: 6966979472
[2026-01-13 00:38:19] 2026-01-12 23:38:19,238 [wrapper] cleanup supervisor_pilot 1390465 1374109
[2026-01-13 00:38:19] 2026-01-12 23:38:19,242 [wrapper] Test setup, not cleaning
[2026-01-13 00:38:19] 2026-01-12 23:38:19,246 [wrapper] apfmon messages muted
[2026-01-13 00:38:19] 2026-01-12 23:38:19,249 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:38:19] 2026-01-12 23:38:19,253 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:38:19]  *** Error codes and diagnostics ***
[2026-01-13 00:38:19]     "exeErrorCode": 0,
[2026-01-13 00:38:19]     "exeErrorDiag": "",
[2026-01-13 00:38:19]     "pilotErrorCode": 0,
[2026-01-13 00:38:19]     "pilotErrorDiag": "",
[2026-01-13 00:38:19]  *** Listing of results directory ***
[2026-01-13 00:38:19] total 476152
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 00:38:19] -rwx------ 1 boinc boinc     36322 Jan 12 13:53 runpilot2-wrapper.sh
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc       100 Jan 12 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:38:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 23:32 run_atlas
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc       105 Jan 12 23:32 job.xml
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc 288214797 Jan 12 23:32 EVNT.48188454._000010.pool.root.1
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc    592406 Jan 12 23:32 input.tar.gz
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:32 start_atlas.sh
[2026-01-13 00:38:19] drwxrwx--x 2 boinc boinc      4096 Jan 12 23:32 shared
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc         0 Jan 12 23:32 boinc_setup_complete
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc      6372 Jan 12 23:32 init_data.xml
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc         0 Jan 12 23:32 boinc_lockfile
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc      2620 Jan 12 23:32 pandaJob.out
[2026-01-13 00:38:19] -rw------- 1 boinc boinc    988531 Jan 12 23:32 agis_schedconf.cvmfs.json
[2026-01-13 00:38:19] -rw------- 1 boinc boinc   1516240 Jan 12 23:32 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:38:19] drwx------ 5 boinc boinc      4096 Jan 12 23:32 pilot3
[2026-01-13 00:38:19] -rw------- 1 boinc boinc 193715867 Jan 13 00:37 HITS.48188456._000233.pool.root.1
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc       529 Jan 13 00:37 boinc_task_state.xml
[2026-01-13 00:38:19] -rw------- 1 boinc boinc        95 Jan 13 00:37 pilot_heartbeat.json
[2026-01-13 00:38:19] -rw------- 1 boinc boinc      1017 Jan 13 00:37 memory_monitor_summary.json
[2026-01-13 00:38:19] -rw------- 1 boinc boinc    278157 Jan 13 00:37 log.48188456._000233.job.log.tgz.1
[2026-01-13 00:38:19] -rw------- 1 boinc boinc      7766 Jan 13 00:37 heartbeat.json
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc      8192 Jan 13 00:37 boinc_mmap_file
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc        27 Jan 13 00:37 wrapper_checkpoint.txt
[2026-01-13 00:38:19] -rw------- 1 boinc boinc      4752 Jan 13 00:38 pilotlog.txt
[2026-01-13 00:38:19] -rw------- 1 boinc boinc    589114 Jan 13 00:38 log.48188456._000233.job.log.1
[2026-01-13 00:38:19] -rw------- 1 boinc boinc       357 Jan 13 00:38 output.list
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc       620 Jan 13 00:38 runtime_log
[2026-01-13 00:38:19] -rw------- 1 boinc boinc    890880 Jan 13 00:38 result.tar.gz
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc      8912 Jan 13 00:38 runtime_log.err
[2026-01-13 00:38:19] -rw------- 1 boinc boinc       661 Jan 13 00:38 YGrLDm3aWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIfnKDmeo2vZn.diag
[2026-01-13 00:38:19] -rw-r--r-- 1 boinc boinc     21972 Jan 13 00:38 stderr.txt
[2026-01-13 00:38:19] HITS file was successfully produced:
[2026-01-13 00:38:19] -rw------- 1 boinc boinc 193715867 Jan 13 00:37 shared/HITS.pool.root.1
[2026-01-13 00:38:19]  *** Contents of shared directory: ***
[2026-01-13 00:38:19] total 472112
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc 288214797 Jan 12 23:32 ATLAS.root_0
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc    592406 Jan 12 23:32 input.tar.gz
[2026-01-13 00:38:19] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:32 start_atlas.sh
[2026-01-13 00:38:19] -rw------- 1 boinc boinc 193715867 Jan 13 00:37 HITS.pool.root.1
[2026-01-13 00:38:19] -rw------- 1 boinc boinc    890880 Jan 13 00:38 result.tar.gz
00:38:20 (1370303): run_atlas exited; CPU time 14563.485113
00:38:20 (1370303): called boinc_finish(0)

</stderr_txt>
]]>

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