Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:26:17 (3634677): wrapper (7.7.26015): starting
14:26:17 (3634677): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 14:26:17] Arguments: --nthreads 8
[2026-01-12 14:26:17] Threads: 8
[2026-01-12 14:26:17] Checking for CVMFS
[2026-01-12 14:26:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 14:26:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 14:26:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 14:26:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 14:26:18] 2.13.3.0 2033223 21640 210536 155064 1 469 34162238 40960000 27979 16776704 0 86014947 99.634 91231618 35971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 14:26:18] CVMFS is ok
[2026-01-12 14:26:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 14:26:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 14:26:18] Further information can be found at the LHC@home message board.
[2026-01-12 14:26:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 14:26:18] Checking for apptainer binary...
[2026-01-12 14:26:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 14:26:18] Running /usr/bin/apptainer --version
[2026-01-12 14:26:18] apptainer version 1.4.5-2.el9
[2026-01-12 14:26:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 14:26:18] c-212-17.aglt2.org
[2026-01-12 14:26:18] apptainer works
[2026-01-12 14:26:18] Set ATHENA_PROC_NUMBER=8
[2026-01-12 14:26:18] Set ATHENA_CORE_NUMBER=8
[2026-01-12 14:26:18] Starting ATLAS job with PandaID=6966979379
[2026-01-12 14:26:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 16:49:18]  *** The last 200 lines of the pilot log: ***
[2026-01-12 16:49:18] 2026-01-12 21:48:21,483 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 16:49:18] 2026-01-12 21:48:21,513 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3301.753812499998
[2026-01-12 16:49:18] 2026-01-12 21:48:21,558 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6966979379/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,559 | INFO     | extracted standard info from prmon json
[2026-01-12 16:49:18] 2026-01-12 21:48:21,559 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 16:49:18] 2026-01-12 21:48:21,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 16:49:18] 2026-01-12 21:48:21,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 16:49:18] 2026-01-12 21:48:21,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 16:49:18] 2026-01-12 21:48:21,596 | INFO     | fitting pss+swap vs Time
[2026-01-12 16:49:18] 2026-01-12 21:48:21,597 | INFO     | sum of square deviations: 832722590.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,605 | INFO     | sum of deviations: -41735728958.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,606 | INFO     | mean x: 1768250234.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,606 | INFO     | mean y: 2645977.1366906473
[2026-01-12 16:49:18] 2026-01-12 21:48:21,606 | INFO     | intersect: 88626652798.11662
[2026-01-12 16:49:18] 2026-01-12 21:48:21,606 | INFO     | chi2: 2.1246949489295512
[2026-01-12 16:49:18] 2026-01-12 21:48:21,606 | INFO     | sum of square deviations: 746051197.5
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | sum of deviations: -30541852008.499966
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | mean x: 1768250081.5
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | mean y: 2665222.5895522386
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | intersect: 72391306222.2456
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | chi2: 1.4408818740158744
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | current chi2=1.4408818740158744 (change=32.184058952001116 %)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,607 | INFO     | sum of square deviations: 665612480.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,608 | INFO     | sum of deviations: -28278692014.999996
[2026-01-12 16:49:18] 2026-01-12 21:48:21,608 | INFO     | mean x: 1768249929.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,608 | INFO     | mean y: 2669516.612403101
[2026-01-12 16:49:18] 2026-01-12 21:48:21,608 | INFO     | intersect: 75127155084.7565
[2026-01-12 16:49:18] 2026-01-12 21:48:21,608 | INFO     | chi2: 1.4349419603719784
[2026-01-12 16:49:18] 2026-01-12 21:48:21,609 | INFO     | current chi2=1.4349419603719784 (change=0.41224154117095724 %)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,609 | INFO     | right removable region: 128
[2026-01-12 16:49:18] 2026-01-12 21:48:21,617 | INFO     | sum of square deviations: 746051197.5
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | sum of deviations: -57749825511.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | mean x: 1768250386.5
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | mean y: 2673568.8358208956
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | intersect: 136878201176.48811
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | chi2: 0.9448429927968087
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | current chi2=0.9448429927968087 (change=55.53041657707932 %)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,618 | INFO     | sum of square deviations: 665612480.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | sum of deviations: -53269069474.000015
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | mean x: 1768250539.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | mean y: 2665050.03875969
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | intersect: 141516028515.563
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | chi2: 0.9439120768643308
[2026-01-12 16:49:18] 2026-01-12 21:48:21,619 | INFO     | current chi2=0.9439120768643308 (change=0.09852599210397664 %)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | left removable region: 20
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | sum of square deviations: 390582207.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | sum of deviations: -30171539705.0
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | mean x: 1768250508.5
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | mean y: 2669304.277777778
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | intersect: 136595784580.50485
[2026-01-12 16:49:18] 2026-01-12 21:48:21,620 | INFO     | chi2: 0.21031818017487522
[2026-01-12 16:49:18] 2026-01-12 21:48:21,621 | INFO     | current memory leak: -77.25 B/s (using 108 data points, chi2=0.21)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,632 | INFO     | could have reported an average CPU frequency of 3370 MHz (8 samples)
[2026-01-12 16:49:18] 2026-01-12 21:48:21,632 | INFO     | ..............................
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . Timing measurements:
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . get job = 0 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . initial setup = 2 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . payload setup = 8 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . stage-in = 0 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . payload execution = 8436 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . stage-out = 2 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | . log creation = 0 s
[2026-01-12 16:49:18] 2026-01-12 21:48:21,633 | INFO     | ..............................
[2026-01-12 16:49:18] 2026-01-12 21:48:21,987 | INFO     | time since job start (8508s) is within the limit (349056.0s)
[2026-01-12 16:49:18] 2026-01-12 21:48:22,314 | INFO     | 
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | job summary report
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | --------------------------------------------------
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | PanDA job id: 6966979379
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | task id: 48188456
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | errors: (none)
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | pilot state: finished 
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | transexitcode: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | exeerrorcode: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | exeerrordiag: 
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | exitcode: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:22,315 | INFO     | exitmsg: OK
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | cpuconsumptiontime: 27229 s
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | nevents: 400
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | neventsw: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | pid: 3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | pgrp: 3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | corecount: 8
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | event service: False
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | sizes: {0: 2284113, 6: 2284375, 11: 2284403, 8448: 2312212, 8449: 2312211, 8452: 2321265, 8453: 2321449, 8491: 2321643}
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | --------------------------------------------------
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | 
[2026-01-12 16:49:18] 2026-01-12 21:48:22,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | job 6966979379 has completed (purged errors)
[2026-01-12 16:49:18] 2026-01-12 21:48:22,539 | INFO     | overall cleanup function is called
[2026-01-12 16:49:18] 2026-01-12 21:48:23,624 | INFO     | --- collectZombieJob: --- 10, [3645092]
[2026-01-12 16:49:18] 2026-01-12 21:48:23,624 | INFO     | zombie collector waiting for pid 3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:23,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 16:49:18] 2026-01-12 21:48:23,624 | INFO     | collected zombie processes
[2026-01-12 16:49:18] 2026-01-12 21:48:23,624 | INFO     | will attempt to kill all subprocesses of pid=3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:25,428 | INFO     | process IDs to be killed: [3645092] (in reverse order)
[2026-01-12 16:49:18] 2026-01-12 21:48:25,859 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 16:49:18] 2026-01-12 21:48:25,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 16:49:18] 2026-01-12 21:48:25,907 | INFO     | did not find any defunct processes belonging to 3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:25,960 | INFO     | did not find any defunct processes belonging to 3645092
[2026-01-12 16:49:18] 2026-01-12 21:48:25,960 | INFO     | ready for new job
[2026-01-12 16:49:18] 2026-01-12 21:48:25,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 16:49:18] 2026-01-12 21:48:25,966 | INFO     | ***************************************
[2026-01-12 16:49:18] 2026-01-12 21:48:25,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 16:49:18] 2026-01-12 21:48:25,966 | INFO     | ***************************************
[2026-01-12 16:49:18] 2026-01-12 21:48:25,966 | INFO     | 
[2026-01-12 16:49:18] 2026-01-12 21:48:25,975 | INFO     | architecture information:
[2026-01-12 16:49:18] 2026-01-12 21:48:25,975 | INFO     | executing command: cat /etc/os-release
[2026-01-12 16:49:18] 2026-01-12 21:48:26,067 | INFO     | cat /etc/os-release:
[2026-01-12 16:49:18] NAME="CentOS Linux"
[2026-01-12 16:49:18] VERSION="7 (Core)"
[2026-01-12 16:49:18] ID="centos"
[2026-01-12 16:49:18] ID_LIKE="rhel fedora"
[2026-01-12 16:49:18] VERSION_ID="7"
[2026-01-12 16:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 16:49:18] ANSI_COLOR="0;31"
[2026-01-12 16:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 16:49:18] HOME_URL="https://www.centos.org/"
[2026-01-12 16:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 16:49:18] 
[2026-01-12 16:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 16:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 16:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 16:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 16:49:18] 
[2026-01-12 16:49:18] 2026-01-12 21:48:26,068 | INFO     | ***************************************
[2026-01-12 16:49:18] 2026-01-12 21:48:26,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-12 16:49:18] 2026-01-12 21:48:26,691 | INFO     | sufficient remaining disk space (123392229376 B)
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | INFO     | update_server=False
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:49:18] 2026-01-12 21:48:26,692 | INFO     | aborting loop
[2026-01-12 16:49:18] 2026-01-12 21:48:26,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 16:49:18] 2026-01-12 21:48:26,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 16:49:18] 2026-01-12 21:48:26,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:49:18] 2026-01-12 21:48:27,183 | INFO     | all payload control threads have been joined
[2026-01-12 16:49:18] 2026-01-12 21:48:27,444 | INFO     | all data control threads have been joined
[2026-01-12 16:49:18] 2026-01-12 21:48:27,699 | INFO     | [job] retrieve thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:27,699 | INFO     | [job] job monitor thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:27,825 | INFO     | [payload] validate_post thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:27,934 | INFO     | [job] queue monitor thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:27,957 | INFO     | all job control threads have been joined
[2026-01-12 16:49:18] 2026-01-12 21:48:28,020 | INFO     | [data] copytool_in thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,143 | INFO     | [payload] failed_post thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,188 | INFO     | [payload] control thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,236 | INFO     | [job] validate thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,278 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,450 | INFO     | [data] control thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,514 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,700 | INFO     | [data] copytool_out thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:28,963 | INFO     | [job] control thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:29,182 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:30,710 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:37,195 | INFO     | job.realtimelogging is not enabled
[2026-01-12 16:49:18] 2026-01-12 21:48:38,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 16:49:18] 2026-01-12 21:48:47,183 | INFO     | [monitor] cgroup control has ended
[2026-01-12 16:49:18] 2026-01-12 21:48:48,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275428493120)>', '<ExcThread(monitor, started 140274906953472)>']
[2026-01-12 16:49:18] 2026-01-12 21:48:53,224 | INFO     | all workflow threads have been joined
[2026-01-12 16:49:18] 2026-01-12 21:48:53,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 16:49:18] 2026-01-12 21:48:53,224 | INFO     | traces error code: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:53,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 16:49:18] 2026-01-12 21:48:57,602 | INFO     | PID=3638655 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | INFO     | .. there are 31 such processes running
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 16:49:18] 2026-01-12 21:48:57,608 | INFO     | [monitor] control thread has ended
[2026-01-12 16:49:18] 2026-01-12 21:48:58,138 [wrapper] ==== pilot stdout END ====
[2026-01-12 16:49:18] 2026-01-12 21:48:58,152 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 16:49:18] 2026-01-12 21:48:58,166 [wrapper] pilotpid: 3638655
[2026-01-12 16:49:18] 2026-01-12 21:48:58,191 [wrapper] Pilot exit status: 0
[2026-01-12 16:49:18] 2026-01-12 21:48:58,425 [wrapper] pandaids: 6966979379
[2026-01-12 16:49:18] 2026-01-12 21:48:58,845 [wrapper] cleanup supervisor_pilot  343741 3638656
[2026-01-12 16:49:18] 2026-01-12 21:48:58,874 [wrapper] Test setup, not cleaning
[2026-01-12 16:49:18] 2026-01-12 21:48:58,893 [wrapper] apfmon messages muted
[2026-01-12 16:49:18] 2026-01-12 21:48:58,906 [wrapper] ==== wrapper stdout END ====
[2026-01-12 16:49:18] 2026-01-12 21:48:58,917 [wrapper] ==== wrapper stderr END ====
[2026-01-12 16:49:18]  *** Error codes and diagnostics ***
[2026-01-12 16:49:18]     "exeErrorCode": 0,
[2026-01-12 16:49:18]     "exeErrorDiag": "",
[2026-01-12 16:49:18]     "pilotErrorCode": 0,
[2026-01-12 16:49:18]     "pilotErrorDiag": "",
[2026-01-12 16:49:18]  *** Listing of results directory ***
[2026-01-12 16:49:18] total 479212
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:52 pilot3.tar.gz
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:52 queuedata.json
[2026-01-12 16:49:18] -rwx------. 1 boincer umatlas     36322 Jan 12 07:52 runpilot2-wrapper.sh
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas       100 Jan 12 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 16:49:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 14:26 run_atlas
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas       105 Jan 12 14:26 job.xml
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas 287968049 Jan 12 14:26 EVNT.48188454._000006.pool.root.1
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 14:26 start_atlas.sh
[2026-01-12 16:49:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 14:26 shared
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 14:26 input.tar.gz
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas         0 Jan 12 14:26 boinc_lockfile
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas      2621 Jan 12 14:26 pandaJob.out
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas        57 Jan 12 14:26 setup.sh.local
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas    988547 Jan 12 14:26 agis_schedconf.cvmfs.json
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas   1516240 Jan 12 14:26 agis_ddmendpoints.agis.ALL.json
[2026-01-12 16:49:18] drwx------. 5 boincer umatlas      4096 Jan 12 14:26 pilot3
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas      6957 Jan 12 16:40 init_data.xml
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas 195654208 Jan 12 16:46 HITS.48188456._000140.pool.root.1
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas       529 Jan 12 16:46 boinc_task_state.xml
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas      1035 Jan 12 16:47 memory_monitor_summary.json
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas    416739 Jan 12 16:47 log.48188456._000140.job.log.tgz.1
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas        95 Jan 12 16:47 pilot_heartbeat.json
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas      7770 Jan 12 16:48 heartbeat.json
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas       823 Jan 12 16:48 pilotlog.txt
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas   1173461 Jan 12 16:48 log.48188456._000140.job.log.1
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas       357 Jan 12 16:48 output.list
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas       620 Jan 12 16:48 runtime_log
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas   1607680 Jan 12 16:48 result.tar.gz
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas       652 Jan 12 16:48 yiPODmeaWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbenKDmrkz7Wo.diag
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas      9342 Jan 12 16:48 runtime_log.err
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 16:49 boinc_mmap_file
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas        27 Jan 12 16:49 wrapper_checkpoint.txt
[2026-01-12 16:49:18] -rw-r--r--. 1 boincer umatlas     21074 Jan 12 16:49 stderr.txt
[2026-01-12 16:49:18] HITS file was successfully produced:
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas 195654208 Jan 12 16:46 shared/HITS.pool.root.1
[2026-01-12 16:49:18]  *** Contents of shared directory: ***
[2026-01-12 16:49:18] total 474464
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas 287968049 Jan 12 14:26 ATLAS.root_0
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 14:26 start_atlas.sh
[2026-01-12 16:49:18] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 14:26 input.tar.gz
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas 195654208 Jan 12 16:46 HITS.pool.root.1
[2026-01-12 16:49:18] -rw-------. 1 boincer umatlas   1607680 Jan 12 16:48 result.tar.gz
16:49:20 (3634677): run_atlas exited; CPU time 27549.029879
16:49:20 (3634677): called boinc_finish(0)

</stderr_txt>
]]>

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