Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:22:45 (71857): wrapper (7.7.26015): starting
15:22:45 (71857): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 15:22:45] Arguments: --nthreads 4
[2026-01-12 15:22:45] Threads: 4
[2026-01-12 15:22:45] Checking for CVMFS
[2026-01-12 15:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 15:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 15:22:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 15:22:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 15:22:45] 2.9.2.0 14824 67 51608 155055 0 56 27466832 36864001 0 130560 0 65641 99.973 4221 27409 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 15:22:45] CVMFS is ok
[2026-01-12 15:22:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 15:22:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 15:22:45] Further information can be found at the LHC@home message board.
[2026-01-12 15:22:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 15:22:45] Checking for apptainer binary...
[2026-01-12 15:22:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 15:22:45] Running /usr/bin/apptainer --version
[2026-01-12 15:22:45] apptainer version 1.4.1-1.1
[2026-01-12 15:22:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 15:22:45] atlasA237
[2026-01-12 15:22:45] apptainer works
[2026-01-12 15:22:45] Set ATHENA_PROC_NUMBER=4
[2026-01-12 15:22:45] Set ATHENA_CORE_NUMBER=4
[2026-01-12 15:22:45] Starting ATLAS job with PandaID=6966967248
[2026-01-12 15:22:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 16:37:05]  *** The last 200 lines of the pilot log: ***
[2026-01-12 16:37:05] 2026-01-12 15:36:26,877 | INFO     | all job control threads have been joined
[2026-01-12 16:37:05] 2026-01-12 15:36:27,106 | INFO     | all data control threads have been joined
[2026-01-12 16:37:05] 2026-01-12 15:36:27,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 16:37:05] 2026-01-12 15:36:27,305 | INFO     | [job] retrieve thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,305 | INFO     | [job] queue monitor thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,393 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,396 | INFO     | [job] job monitor thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,495 | INFO     | [payload] validate_post thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,682 | INFO     | all payload control threads have been joined
[2026-01-12 16:37:05] 2026-01-12 15:36:27,799 | INFO     | [data] copytool_in thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:27,883 | INFO     | [job] control thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,112 | INFO     | [data] control thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,325 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,520 | INFO     | [payload] failed_post thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,687 | INFO     | [payload] control thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,706 | INFO     | [job] validate thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:28,794 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:29,135 | INFO     | [data] copytool_out thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:29,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 16:37:05] 2026-01-12 15:36:33,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:37,186 | INFO     | job.realtimelogging is not enabled
[2026-01-12 16:37:05] 2026-01-12 15:36:38,191 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 16:37:05] 2026-01-12 15:36:56,786 | INFO     | PID=75673 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 16:37:05] 2026-01-12 15:36:56,786 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 16:37:05] 2026-01-12 15:36:56,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 16:37:05] 2026-01-12 15:36:56,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 16:37:05] 2026-01-12 15:36:58,441 | INFO     | [monitor] cgroup control has ended
[2026-01-12 16:37:05] 2026-01-12 15:37:00,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252579084096)>', '<ExcThread(monitor, started 140251955721984)>']
[2026-01-12 16:37:05] 2026-01-12 15:37:00,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 16:37:05] 2026-01-12 15:37:00,806 | INFO     | [monitor] control thread has ended
[2026-01-12 16:37:05] 2026-01-12 15:37:05,122 | INFO     | all workflow threads have been joined
[2026-01-12 16:37:05] 2026-01-12 15:37:05,122 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 16:37:05] 2026-01-12 15:37:05,122 | INFO     | traces error code: 0
[2026-01-12 16:37:05] 2026-01-12 15:37:05,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 16:37:05] 2026-01-12 15:37:05,192 [wrapper] ==== pilot stdout END ====
[2026-01-12 16:37:05] 2026-01-12 15:37:05,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 16:37:05] 2026-01-12 15:37:05,200 [wrapper] pilotpid: 75673
[2026-01-12 16:37:05] 2026-01-12 15:37:05,203 [wrapper] Pilot exit status: 0
[2026-01-12 16:37:05] 2026-01-12 15:37:05,214 [wrapper] pandaids: 6966967248
[2026-01-12 16:37:05] 2026-01-12 15:37:05,240 [wrapper] cleanup supervisor_pilot   99215 75674
[2026-01-12 16:37:05] 2026-01-12 15:37:05,244 [wrapper] Test setup, not cleaning
[2026-01-12 16:37:05] 2026-01-12 15:37:05,248 [wrapper] apfmon messages muted
[2026-01-12 16:37:05] 2026-01-12 15:37:05,252 [wrapper] ==== wrapper stdout END ====
[2026-01-12 16:37:05] 2026-01-12 15:37:05,255 [wrapper] ==== wrapper stderr END ====
[2026-01-12 16:37:05]  *** Error codes and diagnostics ***
[2026-01-12 16:37:05]     "exeErrorCode": 0,
[2026-01-12 16:37:05]     "exeErrorDiag": "",
[2026-01-12 16:37:05]     "pilotErrorCode": 0,
[2026-01-12 16:37:05]     "pilotErrorDiag": "",
[2026-01-12 16:37:05]  *** Listing of results directory ***
[2026-01-12 16:37:05] total 492512
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:21 pilot3.tar.gz
[2026-01-12 16:37:05] -rwx------ 1 boinc boinc     36322 Jan 12 13:23 runpilot2-wrapper.sh
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:23 queuedata.json
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc       100 Jan 12 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 16:37:05] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 15:22 run_atlas
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc       105 Jan 12 15:22 job.xml
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc 289929539 Jan 12 15:22 EVNT.48188638._000009.pool.root.1
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc    592422 Jan 12 15:22 input.tar.gz
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc     15847 Jan 12 15:22 start_atlas.sh
[2026-01-12 16:37:05] drwxrwx--x 2 boinc boinc      4096 Jan 12 15:22 shared
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc         0 Jan 12 15:22 boinc_setup_complete
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      6371 Jan 12 15:22 init_data.xml
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc         0 Jan 12 15:22 boinc_lockfile
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      2647 Jan 12 15:22 pandaJob.out
[2026-01-12 16:37:05] -rw------- 1 boinc boinc    986112 Jan 12 15:22 agis_schedconf.cvmfs.json
[2026-01-12 16:37:05] -rw------- 1 boinc boinc   1516240 Jan 12 15:22 agis_ddmendpoints.agis.ALL.json
[2026-01-12 16:37:05] drwx------ 5 boinc boinc      4096 Jan 12 15:22 pilot3
[2026-01-12 16:37:05] -rw------- 1 boinc boinc 208667724 Jan 12 16:35 HITS.48188640._000201.pool.root.1
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc       529 Jan 12 16:36 boinc_task_state.xml
[2026-01-12 16:37:05] -rw------- 1 boinc boinc      1027 Jan 12 16:36 memory_monitor_summary.json
[2026-01-12 16:37:05] -rw------- 1 boinc boinc    267274 Jan 12 16:36 log.48188640._000201.job.log.tgz.1
[2026-01-12 16:37:05] -rw------- 1 boinc boinc        95 Jan 12 16:36 pilot_heartbeat.json
[2026-01-12 16:37:05] -rw------- 1 boinc boinc      7765 Jan 12 16:36 heartbeat.json
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      8192 Jan 12 16:36 boinc_mmap_file
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc        27 Jan 12 16:36 wrapper_checkpoint.txt
[2026-01-12 16:37:05] -rw------- 1 boinc boinc      4822 Jan 12 16:37 pilotlog.txt
[2026-01-12 16:37:05] -rw------- 1 boinc boinc    650798 Jan 12 16:37 log.48188640._000201.job.log.1
[2026-01-12 16:37:05] -rw------- 1 boinc boinc       357 Jan 12 16:37 output.list
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc       620 Jan 12 16:37 runtime_log
[2026-01-12 16:37:05] -rw------- 1 boinc boinc    942080 Jan 12 16:37 result.tar.gz
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      8912 Jan 12 16:37 runtime_log.err
[2026-01-12 16:37:05] -rw------- 1 boinc boinc       661 Jan 12 16:37 444LDmX8Vz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyZnKDmLKmzrn.diag
[2026-01-12 16:37:05] -rw-r--r-- 1 boinc boinc      6948 Jan 12 16:37 stderr.txt
[2026-01-12 16:37:05] HITS file was successfully produced:
[2026-01-12 16:37:05] -rw------- 1 boinc boinc 208667724 Jan 12 16:35 shared/HITS.pool.root.1
[2026-01-12 16:37:05]  *** Contents of shared directory: ***
[2026-01-12 16:37:05] total 488440
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc 289929539 Jan 12 15:22 ATLAS.root_0
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc    592422 Jan 12 15:22 input.tar.gz
[2026-01-12 16:37:05] -rw-r--r-- 2 boinc boinc     15847 Jan 12 15:22 start_atlas.sh
[2026-01-12 16:37:05] -rw------- 1 boinc boinc 208667724 Jan 12 16:35 HITS.pool.root.1
[2026-01-12 16:37:05] -rw------- 1 boinc boinc    942080 Jan 12 16:37 result.tar.gz
16:37:07 (71857): run_atlas exited; CPU time 16628.403911
16:37:07 (71857): called boinc_finish(0)

</stderr_txt>
]]>

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