Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:46:08 (2834620): wrapper (7.7.26015): starting
20:46:08 (2834620): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 20:46:08] Arguments: --nthreads 12
[2026-01-12 20:46:08] Threads: 12
[2026-01-12 20:46:08] Checking for CVMFS
[2026-01-12 20:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 20:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 20:46:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 20:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 20:46:09] 2.11.0.0 943368 682 105936 155065 0 68 4380422 6144000 15540 130560 0 4590110 99.959 249422 367 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-12 20:46:09] CVMFS is ok
[2026-01-12 20:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 20:46:09] Checking for apptainer binary...
[2026-01-12 20:46:09] apptainer is not installed, using version from CVMFS
[2026-01-12 20:46:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 20:46:09] radiat0r
[2026-01-12 20:46:09] apptainer works
[2026-01-12 20:46:09] Set ATHENA_PROC_NUMBER=12
[2026-01-12 20:46:09] Set ATHENA_CORE_NUMBER=12
[2026-01-12 20:46:09] Starting ATLAS job with PandaID=6966967109
[2026-01-12 20:46:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 21:47:04]  *** The last 200 lines of the pilot log: ***
[2026-01-12 21:47:04] 2026-01-12 21:46:13,422 | INFO     |  -- lfn=log.48188640._000062.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 21:47:04] 2026-01-12 21:46:13,422 | INFO     | stage-out finished correctly
[2026-01-12 21:47:04] 2026-01-12 21:46:14,138 | INFO     | monitor loop #245: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:14,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:14,556 | INFO     | PID=2839347 has CPU usage=26.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-12 21:47:04] 2026-01-12 21:46:14,556 | INFO     | .. there are 16 such processes running
[2026-01-12 21:47:04] 2026-01-12 21:46:15,557 | INFO     | time since job start (3586s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:16,019 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 21:47:04] 2026-01-12 21:46:16,642 | INFO     | monitor loop #246: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:16,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:16,731 | INFO     | job 6966967109 has state=finished
[2026-01-12 21:47:04] 2026-01-12 21:46:16,731 | INFO     | preparing for final server update for job 6966967109 in state='finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:16,732 | INFO     | this job has now completed (state=finished)
[2026-01-12 21:47:04] 2026-01-12 21:46:16,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 21:47:04] 2026-01-12 21:46:16,732 | INFO     | log transfer has been attempted: DONE
[2026-01-12 21:47:04] 2026-01-12 21:46:16,732 | INFO     | job 6966967109 has finished - writing final server update
[2026-01-12 21:47:04] 2026-01-12 21:46:16,732 | INFO     | total number of processed events: 400 (read)
[2026-01-12 21:47:04] 2026-01-12 21:46:16,734 | INFO     | executing command: lscpu
[2026-01-12 21:47:04] 2026-01-12 21:46:16,926 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 21:47:04] 2026-01-12 21:46:17,563 | INFO     | time since job start (3588s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:19,146 | INFO     | monitor loop #247: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:19,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:19,568 | INFO     | time since job start (3590s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:21,573 | INFO     | time since job start (3592s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:21,648 | INFO     | monitor loop #248: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:21,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:23,579 | INFO     | time since job start (3594s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:24,151 | INFO     | monitor loop #249: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:24,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:24,469 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-12 21:47:04] 2026-01-12 21:46:25,585 | INFO     | time since job start (3596s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:26,655 | INFO     | monitor loop #250: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:26,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:27,588 | INFO     | time since job start (3598s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:29,158 | INFO     | monitor loop #251: job 0:6966967109 is in state 'finished'
[2026-01-12 21:47:04] 2026-01-12 21:46:29,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 21:47:04] 2026-01-12 21:46:29,592 | INFO     | time since job start (3600s) is within the limit (349056.0s)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,184 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 21:47:04] 2026-01-12 21:46:30,251 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2360.36128515625
[2026-01-12 21:47:04] 2026-01-12 21:46:30,321 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6966967109/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,322 | INFO     | extracted standard info from prmon json
[2026-01-12 21:47:04] 2026-01-12 21:46:30,322 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 21:47:04] 2026-01-12 21:46:30,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 21:47:04] 2026-01-12 21:46:30,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 21:47:04] 2026-01-12 21:46:30,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 21:47:04] 2026-01-12 21:46:30,325 | INFO     | fitting pss+swap vs Time
[2026-01-12 21:47:04] 2026-01-12 21:46:30,325 | INFO     | sum of square deviations: 43584073.0
[2026-01-12 21:47:04] 2026-01-12 21:46:30,325 | INFO     | sum of deviations: -2907607303.5
[2026-01-12 21:47:04] 2026-01-12 21:46:30,325 | INFO     | mean x: 1768252685.5
[2026-01-12 21:47:04] 2026-01-12 21:46:30,325 | INFO     | mean y: 3065869.5576923075
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | intersect: 117967819250.75932
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | chi2: 0.016775956328409013
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | current memory leak: -66.71 B/s (using 52 data points, chi2=0.02)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | could have reported an average CPU frequency of 2368 MHz (5 samples)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | ..............................
[2026-01-12 21:47:04] 2026-01-12 21:46:30,326 | INFO     | . Timing measurements:
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . get job = 0 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . initial setup = 3 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . payload setup = 9 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . stage-in = 0 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . payload execution = 3551 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . stage-out = 0 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | . log creation = 0 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,327 | INFO     | ..............................
[2026-01-12 21:47:04] 2026-01-12 21:46:30,429 | INFO     | 
[2026-01-12 21:47:04] 2026-01-12 21:46:30,429 | INFO     | job summary report
[2026-01-12 21:47:04] 2026-01-12 21:46:30,429 | INFO     | --------------------------------------------------
[2026-01-12 21:47:04] 2026-01-12 21:46:30,429 | INFO     | PanDA job id: 6966967109
[2026-01-12 21:47:04] 2026-01-12 21:46:30,429 | INFO     | task id: 48188640
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | errors: (none)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | pilot state: finished 
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | transexitcode: 0
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | exeerrorcode: 0
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | exeerrordiag: 
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | exitcode: 0
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | exitmsg: OK
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | cpuconsumptiontime: 38400 s
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | nevents: 400
[2026-01-12 21:47:04] 2026-01-12 21:46:30,430 | INFO     | neventsw: 0
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | pid: 2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | pgrp: 2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | corecount: 12
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | event service: False
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | sizes: {0: 2283968, 1: 2284167, 8: 2284429, 11: 2284457, 3564: 2310198, 3565: 2319198, 3568: 2319382, 3582: 2319608}
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | --------------------------------------------------
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | 
[2026-01-12 21:47:04] 2026-01-12 21:46:30,431 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-12 21:47:04] 2026-01-12 21:46:30,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 21:47:04] 2026-01-12 21:46:30,466 | INFO     | job 6966967109 has completed (purged errors)
[2026-01-12 21:47:04] 2026-01-12 21:46:30,466 | INFO     | overall cleanup function is called
[2026-01-12 21:47:04] 2026-01-12 21:46:31,476 | INFO     | --- collectZombieJob: --- 10, [2847541]
[2026-01-12 21:47:04] 2026-01-12 21:46:31,476 | INFO     | zombie collector waiting for pid 2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:31,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 21:47:04] 2026-01-12 21:46:31,476 | INFO     | collected zombie processes
[2026-01-12 21:47:04] 2026-01-12 21:46:31,476 | INFO     | will attempt to kill all subprocesses of pid=2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:32,368 | INFO     | process IDs to be killed: [2847541] (in reverse order)
[2026-01-12 21:47:04] 2026-01-12 21:46:32,678 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 21:47:04] 2026-01-12 21:46:32,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 21:47:04] 2026-01-12 21:46:32,712 | INFO     | did not find any defunct processes belonging to 2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:32,744 | INFO     | did not find any defunct processes belonging to 2847541
[2026-01-12 21:47:04] 2026-01-12 21:46:32,744 | INFO     | ready for new job
[2026-01-12 21:47:04] 2026-01-12 21:46:32,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 21:47:04] 2026-01-12 21:46:32,746 | INFO     | ***************************************
[2026-01-12 21:47:04] 2026-01-12 21:46:32,746 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 21:47:04] 2026-01-12 21:46:32,746 | INFO     | ***************************************
[2026-01-12 21:47:04] 2026-01-12 21:46:32,746 | INFO     | 
[2026-01-12 21:47:04] 2026-01-12 21:46:32,788 | INFO     | architecture information:
[2026-01-12 21:47:04] 2026-01-12 21:46:32,789 | INFO     | executing command: cat /etc/os-release
[2026-01-12 21:47:04] 2026-01-12 21:46:32,815 | INFO     | cat /etc/os-release:
[2026-01-12 21:47:04] NAME="CentOS Linux"
[2026-01-12 21:47:04] VERSION="7 (Core)"
[2026-01-12 21:47:04] ID="centos"
[2026-01-12 21:47:04] ID_LIKE="rhel fedora"
[2026-01-12 21:47:04] VERSION_ID="7"
[2026-01-12 21:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 21:47:04] ANSI_COLOR="0;31"
[2026-01-12 21:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 21:47:04] HOME_URL="https://www.centos.org/"
[2026-01-12 21:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 21:47:04] 
[2026-01-12 21:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 21:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 21:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 21:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 21:47:04] 
[2026-01-12 21:47:04] 2026-01-12 21:46:32,820 | INFO     | ***************************************
[2026-01-12 21:47:04] 2026-01-12 21:46:33,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-12 21:47:04] 2026-01-12 21:46:33,355 | INFO     | sufficient remaining disk space (1694356209664 B)
[2026-01-12 21:47:04] 2026-01-12 21:46:33,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 21:47:04] 2026-01-12 21:46:33,356 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 21:47:04] 2026-01-12 21:46:33,356 | INFO     | update_server=False
[2026-01-12 21:47:04] 2026-01-12 21:46:33,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 21:47:04] 2026-01-12 21:46:33,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 21:47:04] 2026-01-12 21:46:33,357 | INFO     | aborting loop
[2026-01-12 21:47:04] 2026-01-12 21:46:33,400 | INFO     | all payload control threads have been joined
[2026-01-12 21:47:04] 2026-01-12 21:46:33,784 | INFO     | all data control threads have been joined
[2026-01-12 21:47:04] 2026-01-12 21:46:34,065 | INFO     | [monitor] cgroup control has ended
[2026-01-12 21:47:04] 2026-01-12 21:46:34,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 21:47:04] 2026-01-12 21:46:34,136 | INFO     | all job control threads have been joined
[2026-01-12 21:47:04] 2026-01-12 21:46:34,360 | INFO     | [job] job monitor thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:34,361 | INFO     | [job] retrieve thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:34,374 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:34,404 | INFO     | [data] copytool_in thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:34,405 | INFO     | [payload] control thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:34,788 | INFO     | [data] control thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,140 | INFO     | [job] control thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,338 | INFO     | [job] validate thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,344 | INFO     | [payload] failed_post thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 21:47:04] 2026-01-12 21:46:35,560 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 21:47:04] 2026-01-12 21:46:35,861 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:35,885 | INFO     | [payload] validate_post thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:36,068 | INFO     | [data] copytool_out thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:36,444 | INFO     | [job] queue monitor thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:39,640 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:43,932 | INFO     | job.realtimelogging is not enabled
[2026-01-12 21:47:04] 2026-01-12 21:46:44,937 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 21:47:04] 2026-01-12 21:46:45,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499400652608)>', '<ExcThread(monitor, started 140498966664960)>']
[2026-01-12 21:47:04] 2026-01-12 21:46:50,063 | INFO     | all workflow threads have been joined
[2026-01-12 21:47:04] 2026-01-12 21:46:50,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 21:47:04] 2026-01-12 21:46:50,064 | INFO     | traces error code: 0
[2026-01-12 21:47:04] 2026-01-12 21:46:50,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 21:47:04] 2026-01-12 21:47:03,703 | INFO     | PID=2839347 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | INFO     | .. there are 16 such processes running
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 21:47:04] 2026-01-12 21:47:03,704 | INFO     | [monitor] control thread has ended
[2026-01-12 21:47:04] 2026-01-12 21:47:03,906 [wrapper] ==== pilot stdout END ====
[2026-01-12 21:47:04] 2026-01-12 21:47:03,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 21:47:04] 2026-01-12 21:47:03,914 [wrapper] pilotpid: 2839347
[2026-01-12 21:47:04] 2026-01-12 21:47:03,917 [wrapper] Pilot exit status: 0
[2026-01-12 21:47:04] 2026-01-12 21:47:03,932 [wrapper] pandaids: 6966967109
[2026-01-12 21:47:04] 2026-01-12 21:47:04,121 [wrapper] cleanup supervisor_pilot 2944706 2839348
[2026-01-12 21:47:04] 2026-01-12 21:47:04,124 [wrapper] Test setup, not cleaning
[2026-01-12 21:47:04] 2026-01-12 21:47:04,127 [wrapper] apfmon messages muted
[2026-01-12 21:47:04] 2026-01-12 21:47:04,130 [wrapper] ==== wrapper stdout END ====
[2026-01-12 21:47:04] 2026-01-12 21:47:04,134 [wrapper] ==== wrapper stderr END ====
[2026-01-12 21:47:04]  *** Error codes and diagnostics ***
[2026-01-12 21:47:04]     "exeErrorCode": 0,
[2026-01-12 21:47:04]     "exeErrorDiag": "",
[2026-01-12 21:47:04]     "pilotErrorCode": 0,
[2026-01-12 21:47:04]     "pilotErrorDiag": "",
[2026-01-12 21:47:04]  *** Listing of results directory ***
[2026-01-12 21:47:04] total 490044
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc    579449 Jan 12 12:21 pilot3.tar.gz
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc      5112 Jan 12 12:26 queuedata.json
[2026-01-12 21:47:04] -rwx------ 1 boinc boinc     36322 Jan 12 12:26 runpilot2-wrapper.sh
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc       100 Jan 12 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 21:47:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 20:46 run_atlas
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc       105 Jan 12 20:46 job.xml
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:46 start_atlas.sh
[2026-01-12 21:47:04] drwxrwx--x 2 boinc boinc      4096 Jan 12 20:46 shared
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc    592428 Jan 12 20:46 input.tar.gz
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc      9416 Jan 12 20:46 init_data.xml
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc 290681726 Jan 12 20:46 EVNT.48188638._000003.pool.root.1
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:46 boinc_setup_complete
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc         0 Jan 12 20:46 boinc_lockfile
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc      2648 Jan 12 20:46 pandaJob.out
[2026-01-12 21:47:04] -rw------- 1 boinc boinc    988547 Jan 12 20:46 agis_schedconf.cvmfs.json
[2026-01-12 21:47:04] -rw------- 1 boinc boinc   1516240 Jan 12 20:46 agis_ddmendpoints.agis.ALL.json
[2026-01-12 21:47:04] drwx------ 5 boinc boinc      4096 Jan 12 20:46 pilot3
[2026-01-12 21:47:04] -rw------- 1 boinc boinc 205383708 Jan 12 21:45 HITS.48188640._000062.pool.root.1
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc       530 Jan 12 21:45 boinc_task_state.xml
[2026-01-12 21:47:04] -rw------- 1 boinc boinc      1021 Jan 12 21:46 memory_monitor_summary.json
[2026-01-12 21:47:04] -rw------- 1 boinc boinc    388086 Jan 12 21:46 log.48188640._000062.job.log.tgz.1
[2026-01-12 21:47:04] -rw------- 1 boinc boinc        95 Jan 12 21:46 pilot_heartbeat.json
[2026-01-12 21:47:04] -rw------- 1 boinc boinc      7729 Jan 12 21:46 heartbeat.json
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc      8192 Jan 12 21:47 boinc_mmap_file
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc        27 Jan 12 21:47 wrapper_checkpoint.txt
[2026-01-12 21:47:04] -rw------- 1 boinc boinc       823 Jan 12 21:47 pilotlog.txt
[2026-01-12 21:47:04] -rw------- 1 boinc boinc    524120 Jan 12 21:47 log.48188640._000062.job.log.1
[2026-01-12 21:47:04] -rw------- 1 boinc boinc       357 Jan 12 21:47 output.list
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc       620 Jan 12 21:47 runtime_log
[2026-01-12 21:47:04] -rw------- 1 boinc boinc    931840 Jan 12 21:47 result.tar.gz
[2026-01-12 21:47:04] -rw------- 1 boinc boinc       644 Jan 12 21:47 u3UNDmSBWz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiuhKDmGdtr1n.diag
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc      8788 Jan 12 21:47 runtime_log.err
[2026-01-12 21:47:04] -rw-r--r-- 1 boinc boinc     21976 Jan 12 21:47 stderr.txt
[2026-01-12 21:47:04] HITS file was successfully produced:
[2026-01-12 21:47:04] -rw------- 1 boinc boinc 205383708 Jan 12 21:45 shared/HITS.pool.root.1
[2026-01-12 21:47:04]  *** Contents of shared directory: ***
[2026-01-12 21:47:04] total 485960
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc     15847 Jan 12 20:46 start_atlas.sh
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc    592428 Jan 12 20:46 input.tar.gz
[2026-01-12 21:47:04] -rw-r--r-- 2 boinc boinc 290681726 Jan 12 20:46 ATLAS.root_0
[2026-01-12 21:47:04] -rw------- 1 boinc boinc 205383708 Jan 12 21:45 HITS.pool.root.1
[2026-01-12 21:47:04] -rw------- 1 boinc boinc    931840 Jan 12 21:47 result.tar.gz
21:47:06 (2834620): run_atlas exited; CPU time 38662.682682
21:47:06 (2834620): called boinc_finish(0)

</stderr_txt>
]]>

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