Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:46 (4080367): wrapper (7.7.26015): starting
05:38:46 (4080367): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 05:38:46] Arguments: --nthreads 4
[2026-01-13 05:38:46] Threads: 4
[2026-01-13 05:38:46] Checking for CVMFS
[2026-01-13 05:38:46] No cvmfs_config command found, will try listing directly
[2026-01-13 05:38:46] CVMFS is ok
[2026-01-13 05:38:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 05:38:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 05:38:46] Further information can be found at the LHC@home message board.
[2026-01-13 05:38:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 05:38:46] Checking for apptainer binary...
[2026-01-13 05:38:46] which: no apptainer in ((null))
[2026-01-13 05:38:46] apptainer is not installed, using version from CVMFS
[2026-01-13 05:38:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 05:38:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-13 05:38:46] apptainer works
[2026-01-13 05:38:46] Set ATHENA_PROC_NUMBER=4
[2026-01-13 05:38:46] Set ATHENA_CORE_NUMBER=4
[2026-01-13 05:38:46] Starting ATLAS job with PandaID=6966967163
[2026-01-13 05:38:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 08:11:22]  *** The last 200 lines of the pilot log: ***
[2026-01-13 08:11:22] 2026-01-13 06:53:34,658 | INFO     | maximum number of monitored processes: 6
[2026-01-13 08:11:22] 2026-01-13 06:53:34,990 | INFO     | time since job start (8074s) is within the limit (349056.0s)
[2026-01-13 08:11:22] 2026-01-13 06:53:36,995 | INFO     | time since job start (8076s) is within the limit (349056.0s)
[2026-01-13 08:11:22] 2026-01-13 06:53:37,160 | INFO     | monitor loop #562: job 0:6966967163 is in state 'finished'
[2026-01-13 08:11:22] 2026-01-13 06:53:37,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:11:22] 2026-01-13 06:53:39,000 | INFO     | time since job start (8079s) is within the limit (349056.0s)
[2026-01-13 08:11:22] 2026-01-13 06:53:39,663 | INFO     | monitor loop #563: job 0:6966967163 is in state 'finished'
[2026-01-13 08:11:22] 2026-01-13 06:53:39,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,302 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 08:11:22] 2026-01-13 06:53:40,322 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2732.8060156249994
[2026-01-13 08:11:22] 2026-01-13 06:53:40,345 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6966967163/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,346 | INFO     | extracted standard info from prmon json
[2026-01-13 08:11:22] 2026-01-13 06:53:40,346 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 08:11:22] 2026-01-13 06:53:40,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 08:11:22] 2026-01-13 06:53:40,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 08:11:22] 2026-01-13 06:53:40,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 08:11:22] 2026-01-13 06:53:40,349 | INFO     | fitting pss+swap vs Time
[2026-01-13 08:11:22] 2026-01-13 06:53:40,350 | INFO     | sum of square deviations: 713140813.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | sum of deviations: -23570591204.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | mean x: 1768283167.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | mean y: 2454411.477272727
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | intersect: 58447405135.31265
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | chi2: 1.5146805911166332
[2026-01-13 08:11:22] 2026-01-13 06:53:40,351 | INFO     | sum of square deviations: 635130048.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,352 | INFO     | sum of deviations: -22013489009.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,352 | INFO     | mean x: 1768283015.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,352 | INFO     | mean y: 2457456.842519685
[2026-01-13 08:11:22] 2026-01-13 06:53:40,352 | INFO     | intersect: 61290816963.813736
[2026-01-13 08:11:22] 2026-01-13 06:53:40,353 | INFO     | chi2: 1.5077519453009027
[2026-01-13 08:11:22] 2026-01-13 06:53:40,353 | INFO     | current chi2=1.5077519453009027 (change=0.45743279846364493 %)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,353 | INFO     | right removable region: 126
[2026-01-13 08:11:22] 2026-01-13 06:53:40,353 | INFO     | sum of square deviations: 635130048.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,354 | INFO     | sum of deviations: -36763400700.000015
[2026-01-13 08:11:22] 2026-01-13 06:53:40,354 | INFO     | mean x: 1768283320.0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,354 | INFO     | mean y: 2479450.062992126
[2026-01-13 08:11:22] 2026-01-13 06:53:40,354 | INFO     | intersect: 102356490961.55481
[2026-01-13 08:11:22] 2026-01-13 06:53:40,354 | INFO     | chi2: 0.25506247025392714
[2026-01-13 08:11:22] 2026-01-13 06:53:40,355 | INFO     | current chi2=0.25506247025392714 (change=83.16064312503713 %)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,355 | INFO     | sum of square deviations: 563026370.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,355 | INFO     | sum of deviations: -31606194526.500008
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | mean x: 1768283472.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | mean y: 2468524.270491803
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | intersect: 99267288678.60449
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | chi2: 0.2524111227900407
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | current chi2=0.2524111227900407 (change=1.0394894479171748 %)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | left removable region: 20
[2026-01-13 08:11:22] 2026-01-13 06:53:40,356 | INFO     | sum of square deviations: 369281342.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | sum of deviations: -18743629819.999996
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | mean x: 1768283594.5
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | mean y: 2444374.547169811
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | intersect: 89755294837.29965
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | chi2: 0.21452392641933127
[2026-01-13 08:11:22] 2026-01-13 06:53:40,357 | INFO     | current memory leak: -50.76 B/s (using 106 data points, chi2=0.21)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | could have reported an average CPU frequency of 2726 MHz (8 samples)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | ..............................
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . Timing measurements:
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . get job = 0 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . initial setup = 1 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . payload setup = 8 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . stage-in = 0 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . payload execution = 8042 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,358 | INFO     | . stage-out = 0 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,359 | INFO     | . log creation = 0 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,359 | INFO     | ..............................
[2026-01-13 08:11:22] 2026-01-13 06:53:40,451 | INFO     | 
[2026-01-13 08:11:22] 2026-01-13 06:53:40,451 | INFO     | job summary report
[2026-01-13 08:11:22] 2026-01-13 06:53:40,451 | INFO     | --------------------------------------------------
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | PanDA job id: 6966967163
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | task id: 48188640
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | errors: (none)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | pilot state: finished 
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | transexitcode: 0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | exeerrorcode: 0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | exeerrordiag: 
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | exitcode: 0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | exitmsg: OK
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | cpuconsumptiontime: 30802 s
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | nevents: 400
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | neventsw: 0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,452 | INFO     | pid: 4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | pgrp: 4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | corecount: 4
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | event service: False
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | sizes: {0: 2283314, 1: 2284182, 6: 2284444, 12: 2284472, 8053: 2312485, 8054: 2321690, 8055: 2321690, 8063: 2321884}
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | --------------------------------------------------
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | 
[2026-01-13 08:11:22] 2026-01-13 06:53:40,453 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-13 08:11:22] 2026-01-13 06:53:40,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 08:11:22] 2026-01-13 06:53:40,487 | INFO     | job 6966967163 has completed (purged errors)
[2026-01-13 08:11:22] 2026-01-13 06:53:40,487 | INFO     | overall cleanup function is called
[2026-01-13 08:11:22] 2026-01-13 06:53:41,495 | INFO     | --- collectZombieJob: --- 10, [4091762]
[2026-01-13 08:11:22] 2026-01-13 06:53:41,496 | INFO     | zombie collector waiting for pid 4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:41,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 08:11:22] 2026-01-13 06:53:41,496 | INFO     | collected zombie processes
[2026-01-13 08:11:22] 2026-01-13 06:53:41,496 | INFO     | will attempt to kill all subprocesses of pid=4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:42,184 | INFO     | process IDs to be killed: [4091762] (in reverse order)
[2026-01-13 08:11:22] 2026-01-13 06:53:42,409 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 08:11:22] 2026-01-13 06:53:42,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 08:11:22] 2026-01-13 06:53:42,440 | INFO     | did not find any defunct processes belonging to 4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:42,467 | INFO     | did not find any defunct processes belonging to 4091762
[2026-01-13 08:11:22] 2026-01-13 06:53:42,468 | INFO     | ready for new job
[2026-01-13 08:11:22] 2026-01-13 06:53:42,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 08:11:22] 2026-01-13 06:53:42,470 | INFO     | ***************************************
[2026-01-13 08:11:22] 2026-01-13 06:53:42,473 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 08:11:22] 2026-01-13 06:53:42,473 | INFO     | ***************************************
[2026-01-13 08:11:22] 2026-01-13 06:53:42,473 | INFO     | 
[2026-01-13 08:11:22] 2026-01-13 06:53:42,481 | INFO     | architecture information:
[2026-01-13 08:11:22] 2026-01-13 06:53:42,482 | INFO     | executing command: cat /etc/os-release
[2026-01-13 08:11:22] 2026-01-13 06:53:42,502 | INFO     | cat /etc/os-release:
[2026-01-13 08:11:22] NAME="CentOS Linux"
[2026-01-13 08:11:22] VERSION="7 (Core)"
[2026-01-13 08:11:22] ID="centos"
[2026-01-13 08:11:22] ID_LIKE="rhel fedora"
[2026-01-13 08:11:22] VERSION_ID="7"
[2026-01-13 08:11:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 08:11:22] ANSI_COLOR="0;31"
[2026-01-13 08:11:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 08:11:22] HOME_URL="https://www.centos.org/"
[2026-01-13 08:11:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 08:11:22] 
[2026-01-13 08:11:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 08:11:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 08:11:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 08:11:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 08:11:22] 
[2026-01-13 08:11:22] 2026-01-13 06:53:42,502 | INFO     | ***************************************
[2026-01-13 08:11:22] 2026-01-13 06:53:43,005 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-13 08:11:22] 2026-01-13 06:53:43,026 | INFO     | sufficient remaining disk space (3361948565504 B)
[2026-01-13 08:11:22] 2026-01-13 06:53:43,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 08:11:22] 2026-01-13 06:53:43,027 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 08:11:22] 2026-01-13 06:53:43,027 | INFO     | update_server=False
[2026-01-13 08:11:22] 2026-01-13 06:53:43,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 08:11:22] 2026-01-13 06:53:43,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 08:11:22] 2026-01-13 06:53:43,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 08:11:22] 2026-01-13 06:53:43,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:11:22] 2026-01-13 06:53:43,171 | INFO     | aborting loop
[2026-01-13 08:11:22] 2026-01-13 06:53:43,438 | INFO     | all payload control threads have been joined
[2026-01-13 08:11:22] 2026-01-13 06:53:43,473 | INFO     | all data control threads have been joined
[2026-01-13 08:11:22] 2026-01-13 06:53:44,032 | INFO     | [job] retrieve thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,177 | INFO     | [job] job monitor thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,266 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,321 | INFO     | [job] validate thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,444 | INFO     | [payload] control thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,446 | INFO     | all job control threads have been joined
[2026-01-13 08:11:22] 2026-01-13 06:53:44,478 | INFO     | [data] control thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,593 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,634 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:44,980 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:45,032 | INFO     | [data] copytool_out thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:45,157 | INFO     | [payload] validate_post thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:45,379 | INFO     | [data] copytool_in thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:45,451 | INFO     | [job] control thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:45,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:11:22] 2026-01-13 06:53:45,595 | INFO     | [payload] failed_post thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:46,468 | INFO     | [job] queue monitor thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:47,123 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 08:11:22] 2026-01-13 06:53:57,794 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-13 08:11:22] 2026-01-13 06:54:11,562 | INFO     | [monitor] cgroup control has ended
[2026-01-13 08:11:22] 2026-01-13 06:54:12,952 | INFO     | PID=4084361 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 08:11:22] 2026-01-13 06:54:12,952 | INFO     | .. there are 5 such processes running
[2026-01-13 08:11:22] 2026-01-13 06:54:12,952 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 08:11:22] 2026-01-13 06:54:12,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 08:11:22] 2026-01-13 06:54:12,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 08:11:22] 2026-01-13 06:54:13,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22447712274240)>', '<ExcThread(monitor, started 22447474575104)>']
[2026-01-13 08:11:22] 2026-01-13 06:54:13,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 08:11:22] 2026-01-13 06:54:13,958 | INFO     | [monitor] control thread has ended
[2026-01-13 08:11:22] 2026-01-13 06:54:18,104 | INFO     | all workflow threads have been joined
[2026-01-13 08:11:22] 2026-01-13 06:54:18,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 08:11:22] 2026-01-13 06:54:18,105 | INFO     | traces error code: 0
[2026-01-13 08:11:22] 2026-01-13 06:54:18,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 08:11:22] 2026-01-13 06:54:18,205 [wrapper] ==== pilot stdout END ====
[2026-01-13 08:11:22] 2026-01-13 06:54:18,209 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 08:11:22] 2026-01-13 06:54:18,212 [wrapper] pilotpid: 4084361
[2026-01-13 08:11:22] 2026-01-13 06:54:18,216 [wrapper] Pilot exit status: 0
[2026-01-13 08:11:22] 2026-01-13 06:54:18,231 [wrapper] pandaids: 6966967163
[2026-01-13 08:11:22] 2026-01-13 06:54:18,387 [wrapper] cleanup supervisor_pilot   68225 4084362
[2026-01-13 08:11:22] 2026-01-13 06:54:18,392 [wrapper] Test setup, not cleaning
[2026-01-13 08:11:22] 2026-01-13 06:54:18,395 [wrapper] apfmon messages muted
[2026-01-13 08:11:22] 2026-01-13 06:54:18,399 [wrapper] ==== wrapper stdout END ====
[2026-01-13 08:11:22] 2026-01-13 06:54:18,403 [wrapper] ==== wrapper stderr END ====
[2026-01-13 08:11:22]  *** Error codes and diagnostics ***
[2026-01-13 08:11:22]     "exeErrorCode": 0,
[2026-01-13 08:11:22]     "exeErrorDiag": "",
[2026-01-13 08:11:22]     "pilotErrorCode": 0,
[2026-01-13 08:11:22]     "pilotErrorDiag": "",
[2026-01-13 08:11:22]  *** Listing of results directory ***
[2026-01-13 08:11:22] total 504932
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:21 pilot3.tar.gz
[2026-01-13 08:11:22] -rwx------ 1 boinc boinc     36322 Jan 12 13:25 runpilot2-wrapper.sh
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:25 queuedata.json
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc       100 Jan 13 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 08:11:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 05:38 run_atlas
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc       105 Jan 13 05:38 job.xml
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc      6692 Jan 13 05:38 init_data.xml
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc 293880951 Jan 13 05:38 EVNT.48188638._000005.pool.root.1
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc     15847 Jan 13 05:38 start_atlas.sh
[2026-01-13 08:11:22] drwxrwx--x 2 boinc boinc      4096 Jan 13 05:38 shared
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc    592421 Jan 13 05:38 input.tar.gz
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc         0 Jan 13 05:38 boinc_lockfile
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc      2650 Jan 13 05:38 pandaJob.out
[2026-01-13 08:11:22] -rw------- 1 boinc boinc    987755 Jan 13 05:38 agis_schedconf.cvmfs.json
[2026-01-13 08:11:22] -rw------- 1 boinc boinc   1516240 Jan 13 05:38 agis_ddmendpoints.agis.ALL.json
[2026-01-13 08:11:22] drwx------ 5 boinc boinc      4096 Jan 13 05:39 pilot3
[2026-01-13 08:11:22] -rw------- 1 boinc boinc 216281794 Jan 13 07:52 HITS.48188640._000116.pool.root.1
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc       528 Jan 13 07:53 boinc_task_state.xml
[2026-01-13 08:11:22] -rw------- 1 boinc boinc      1021 Jan 13 07:53 memory_monitor_summary.json
[2026-01-13 08:11:22] -rw------- 1 boinc boinc    339144 Jan 13 07:53 log.48188640._000116.job.log.tgz.1
[2026-01-13 08:11:22] -rw------- 1 boinc boinc        95 Jan 13 07:53 pilot_heartbeat.json
[2026-01-13 08:11:22] -rw------- 1 boinc boinc      7786 Jan 13 07:53 heartbeat.json
[2026-01-13 08:11:22] -rw------- 1 boinc boinc      4835 Jan 13 07:54 pilotlog.txt
[2026-01-13 08:11:22] -rw------- 1 boinc boinc   1146326 Jan 13 07:54 log.48188640._000116.job.log.1
[2026-01-13 08:11:22] -rw------- 1 boinc boinc       357 Jan 13 07:54 output.list
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc       620 Jan 13 07:54 runtime_log
[2026-01-13 08:11:22] -rw------- 1 boinc boinc   1505280 Jan 13 07:54 result.tar.gz
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc      9222 Jan 13 07:54 runtime_log.err
[2026-01-13 08:11:22] -rw------- 1 boinc boinc       662 Jan 13 07:54 KlpKDmu9Vz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHuhKDmCsoAKn.diag
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc        26 Jan 13 08:11 wrapper_checkpoint.txt
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc      8192 Jan 13 08:11 boinc_mmap_file
[2026-01-13 08:11:22] -rw-r--r-- 1 boinc boinc     21072 Jan 13 08:11 stderr.txt
[2026-01-13 08:11:22] HITS file was successfully produced:
[2026-01-13 08:11:22] -rw------- 1 boinc boinc 216281794 Jan 13 07:52 shared/HITS.pool.root.1
[2026-01-13 08:11:22]  *** Contents of shared directory: ***
[2026-01-13 08:11:22] total 500288
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc 293880951 Jan 13 05:38 ATLAS.root_0
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc     15847 Jan 13 05:38 start_atlas.sh
[2026-01-13 08:11:22] -rw-r--r-- 2 boinc boinc    592421 Jan 13 05:38 input.tar.gz
[2026-01-13 08:11:22] -rw------- 1 boinc boinc 216281794 Jan 13 07:52 HITS.pool.root.1
[2026-01-13 08:11:22] -rw------- 1 boinc boinc   1505280 Jan 13 07:54 result.tar.gz
08:11:23 (4080367): run_atlas exited; CPU time 31263.553234
08:11:23 (4080367): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN