Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:39 (2388561): wrapper (7.7.26015): starting
05:09:39 (2388561): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 05:09:39] Arguments: --nthreads 12
[2026-01-12 05:09:39] Threads: 12
[2026-01-12 05:09:39] Checking for CVMFS
[2026-01-12 05:09:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 05:09:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 05:09:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 05:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 05:09:42] 2.11.5.0 916571 60925 332288 155053 0 469 42217267 45568001 13423 130560 0 460808765 99.796 288477542 22710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-12 05:09:42] CVMFS is ok
[2026-01-12 05:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 05:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 05:09:42] Further information can be found at the LHC@home message board.
[2026-01-12 05:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 05:09:42] Checking for apptainer binary...
[2026-01-12 05:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 05:09:42] Running /usr/bin/apptainer --version
[2026-01-12 05:09:42] apptainer version 1.4.1-1.el9
[2026-01-12 05:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 05:09:43] wns0045.triumf.lcg
[2026-01-12 05:09:43] apptainer works
[2026-01-12 05:09:43] Set ATHENA_PROC_NUMBER=12
[2026-01-12 05:09:43] Set ATHENA_CORE_NUMBER=12
[2026-01-12 05:09:43] Starting ATLAS job with PandaID=6966979476
[2026-01-12 05:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 05:17:54]  *** The last 200 lines of the pilot log: ***
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | wrong length of table data, x=[1768223595.0, 1768223656.0], y=[31195.0, 436586.0] (must be same and length>=4)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . Timing measurements:
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . get job = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . initial setup = 6 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload setup = 55 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-in = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload execution = 99 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-out = 1 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . log creation = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6966979476/pilotlog.txt
[2026-01-12 05:17:54] 2026-01-12 13:17:05,787 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-12 05:17:54] - Log from pilotlog.txt -
[2026-01-12 05:17:54] 2026-01-12 13:17:05,665 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6966979476/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,665 | INFO     | extracted standard info from prmon json
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | wrong length of table data, x=[1768223595.0, 1768223656.0], y=[31195.0, 436586.0] (must be same and length>=4)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . Timing measurements:
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . get job = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . initial setup = 6 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload setup = 55 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-in = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload execution = 99 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-out = 1 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . log creation = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6966979476/pilotlog.txt
[2026-01-12 05:17:54] 2026-01-12 13:17:05,787 | WARNING  | 
[2026-01-12 05:17:54] [begin log extracts]
[2026-01-12 05:17:54] - Log from pilotlog.txt -
[2026-01-12 05:17:54] 2026-01-12 13:17:05,665 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6966979476/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,665 | INFO     | extracted standard info from prmon json
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | WARNING  | wrong length of table data, x=[1768223595.0, 1768223656.0], y=[31195.0, 436586.0] (must be same and length>=4)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,666 | INFO     | could have reported an average CPU frequency of 2565 MHz (4 samples)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . Timing measurements:
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . get job = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . initial setup = 6 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload setup = 55 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-in = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . payload execution = 99 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . stage-out = 1 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | . log creation = 0 s
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | ..............................
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-12 05:17:54] 2026-01-12 13:17:05,667 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6966979476/pilotlog.txt
[2026-01-12 05:17:54] [end log extracts]
[2026-01-12 05:17:54] 2026-01-12 13:17:05,787 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-12 05:17:54] 2026-01-12 13:17:05,788 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | 
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | job summary report
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | --------------------------------------------------
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | PanDA job id: 6966979476
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | task id: 48188456
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-12 05:14:12,955 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | pilot state: failed 
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | transexitcode: 65
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | exeerrorcode: 65
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | exitcode: 65
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | cpuconsumptiontime: 19 s
[2026-01-12 05:17:54] 2026-01-12 13:17:06,250 | INFO     | nevents: 0
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | neventsw: 0
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | pid: 2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | pgrp: 2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | corecount: 12
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | event service: False
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | sizes: {0: 2283938, 1: 2284137, 12: 2284137, 24: 2284165, 30: 2284455, 34: 2284483, 159: 2307881, 161: 2312201, 321: 2312339}
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | --------------------------------------------------
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | 
[2026-01-12 05:17:54] 2026-01-12 13:17:06,251 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | job 6966979476 has completed (purged errors)
[2026-01-12 05:17:54] 2026-01-12 13:17:06,501 | INFO     | overall cleanup function is called
[2026-01-12 05:17:54] 2026-01-12 13:17:07,148 | INFO     | PID=2392604 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 05:17:54] 2026-01-12 13:17:07,152 | INFO     | .. there are 28 such processes running
[2026-01-12 05:17:54] 2026-01-12 13:17:07,506 | INFO     | --- collectZombieJob: --- 10, [2399479]
[2026-01-12 05:17:54] 2026-01-12 13:17:07,507 | INFO     | zombie collector waiting for pid 2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:07,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 05:17:54] 2026-01-12 13:17:07,507 | INFO     | collected zombie processes
[2026-01-12 05:17:54] 2026-01-12 13:17:07,507 | INFO     | will attempt to kill all subprocesses of pid=2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:07,956 | INFO     | process IDs to be killed: [2399479] (in reverse order)
[2026-01-12 05:17:54] 2026-01-12 13:17:08,451 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 05:17:54] 2026-01-12 13:17:08,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 05:17:54] 2026-01-12 13:17:08,476 | INFO     | did not find any defunct processes belonging to 2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:08,506 | INFO     | did not find any defunct processes belonging to 2399479
[2026-01-12 05:17:54] 2026-01-12 13:17:08,506 | INFO     | ready for new job
[2026-01-12 05:17:54] 2026-01-12 13:17:08,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 05:17:54] 2026-01-12 13:17:08,508 | INFO     | ***************************************
[2026-01-12 05:17:54] 2026-01-12 13:17:08,508 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 05:17:54] 2026-01-12 13:17:08,508 | INFO     | ***************************************
[2026-01-12 05:17:54] 2026-01-12 13:17:08,508 | INFO     | 
[2026-01-12 05:17:54] 2026-01-12 13:17:08,514 | INFO     | architecture information:
[2026-01-12 05:17:54] 2026-01-12 13:17:08,518 | INFO     | executing command: cat /etc/os-release
[2026-01-12 05:17:54] 2026-01-12 13:17:08,626 | INFO     | cat /etc/os-release:
[2026-01-12 05:17:54] NAME="CentOS Linux"
[2026-01-12 05:17:54] VERSION="7 (Core)"
[2026-01-12 05:17:54] ID="centos"
[2026-01-12 05:17:54] ID_LIKE="rhel fedora"
[2026-01-12 05:17:54] VERSION_ID="7"
[2026-01-12 05:17:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 05:17:54] ANSI_COLOR="0;31"
[2026-01-12 05:17:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 05:17:54] HOME_URL="https://www.centos.org/"
[2026-01-12 05:17:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 05:17:54] 
[2026-01-12 05:17:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 05:17:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 05:17:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 05:17:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 05:17:54] 
[2026-01-12 05:17:54] 2026-01-12 13:17:08,626 | INFO     | ***************************************
[2026-01-12 05:17:54] 2026-01-12 13:17:09,130 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-12 05:17:54] 2026-01-12 13:17:09,250 | INFO     | sufficient remaining disk space (1392409313280 B)
[2026-01-12 05:17:54] 2026-01-12 13:17:09,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 05:17:54] 2026-01-12 13:17:09,250 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 05:17:54] 2026-01-12 13:17:09,250 | INFO     | update_server=False
[2026-01-12 05:17:54] 2026-01-12 13:17:09,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 05:17:54] 2026-01-12 13:17:09,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 05:17:54] 2026-01-12 13:17:09,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:17:54] 2026-01-12 13:17:09,261 | INFO     | aborting loop
[2026-01-12 05:17:54] 2026-01-12 13:17:09,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 05:17:54] 2026-01-12 13:17:09,687 | INFO     | all payload control threads have been joined
[2026-01-12 05:17:54] 2026-01-12 13:17:09,889 | INFO     | all job control threads have been joined
[2026-01-12 05:17:54] 2026-01-12 13:17:10,257 | INFO     | [job] retrieve thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,267 | INFO     | [job] job monitor thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,282 | INFO     | all data control threads have been joined
[2026-01-12 05:17:54] 2026-01-12 13:17:10,630 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,694 | INFO     | [payload] control thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,815 | INFO     | [payload] failed_post thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,828 | INFO     | [payload] validate_post thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,896 | INFO     | [job] control thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:10,921 | INFO     | [data] copytool_in thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,051 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,163 | INFO     | [job] validate thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,259 | INFO     | [data] copytool_out thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:17:54] 2026-01-12 13:17:11,288 | INFO     | [data] control thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:11,716 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:12,292 | INFO     | [job] queue monitor thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:13,670 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 05:17:54] 2026-01-12 13:17:40,385 | INFO     | PID=2392604 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 05:17:54] 2026-01-12 13:17:40,385 | INFO     | .. there are 28 such processes running
[2026-01-12 05:17:54] 2026-01-12 13:17:40,385 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 05:17:54] 2026-01-12 13:17:40,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 05:17:54] 2026-01-12 13:17:40,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 05:17:54] 2026-01-12 13:17:46,256 | INFO     | [monitor] cgroup control has ended
[2026-01-12 05:17:54] 2026-01-12 13:17:46,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194800379712)>', '<ExcThread(monitor, started 140193864591104)>']
[2026-01-12 05:17:54] 2026-01-12 13:17:47,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 05:17:54] 2026-01-12 13:17:47,427 | INFO     | [monitor] control thread has ended
[2026-01-12 05:17:54] 2026-01-12 13:17:51,576 | INFO     | all workflow threads have been joined
[2026-01-12 05:17:54] 2026-01-12 13:17:51,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 05:17:54] 2026-01-12 13:17:51,576 | INFO     | traces error code: 0
[2026-01-12 05:17:54] 2026-01-12 13:17:51,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 05:17:54] 2026-01-12 13:17:52,660 [wrapper] ==== pilot stdout END ====
[2026-01-12 05:17:54] 2026-01-12 13:17:52,742 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 05:17:54] 2026-01-12 13:17:52,843 [wrapper] pilotpid: 2392604
[2026-01-12 05:17:54] 2026-01-12 13:17:52,877 [wrapper] Pilot exit status: 0
[2026-01-12 05:17:54] 2026-01-12 13:17:53,085 [wrapper] pandaids: 6966979476
[2026-01-12 05:17:54] 2026-01-12 13:17:53,364 [wrapper] cleanup supervisor_pilot 2392611 2392605
[2026-01-12 05:17:54] 2026-01-12 13:17:53,397 [wrapper] Test setup, not cleaning
[2026-01-12 05:17:54] 2026-01-12 13:17:53,542 [wrapper] apfmon messages muted
[2026-01-12 05:17:54] 2026-01-12 13:17:53,575 [wrapper] ==== wrapper stdout END ====
[2026-01-12 05:17:54] 2026-01-12 13:17:53,624 [wrapper] ==== wrapper stderr END ====
[2026-01-12 05:17:54]  *** Error codes and diagnostics ***
[2026-01-12 05:17:54]     "exeErrorCode": 65,
[2026-01-12 05:17:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-12 05:17:54]     "pilotErrorCode": 1305,
[2026-01-12 05:17:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-12 05:17:54]  *** Listing of results directory ***
[2026-01-12 05:17:54] total 285524
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc    579449 Jan 12 04:52 pilot3.tar.gz
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc      5112 Jan 12 04:52 queuedata.json
[2026-01-12 05:17:54] -rwx------. 1 boinc boinc     36322 Jan 12 04:53 runpilot2-wrapper.sh
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc       100 Jan 12 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 05:17:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 05:09 run_atlas
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc       105 Jan 12 05:09 job.xml
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc 288214797 Jan 12 05:09 EVNT.48188454._000010.pool.root.1
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc    592401 Jan 12 05:09 input.tar.gz
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc      6595 Jan 12 05:09 init_data.xml
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc     15847 Jan 12 05:09 start_atlas.sh
[2026-01-12 05:17:54] drwxrwx--x. 2 boinc boinc      4096 Jan 12 05:09 shared
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc         0 Jan 12 05:09 boinc_lockfile
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc      2620 Jan 12 05:09 pandaJob.out
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc    987696 Jan 12 05:10 agis_schedconf.cvmfs.json
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc   1516240 Jan 12 05:10 agis_ddmendpoints.agis.ALL.json
[2026-01-12 05:17:54] drwx------. 5 boinc boinc      4096 Jan 12 05:10 pilot3
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc       994 Jan 12 05:14 memory_monitor_summary.json
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc     22597 Jan 12 05:14 log.48188456._000237.job.log.tgz.1
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc        95 Jan 12 05:16 pilot_heartbeat.json
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc      8418 Jan 12 05:17 heartbeat.json
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc       523 Jan 12 05:17 boinc_task_state.xml
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc      8192 Jan 12 05:17 boinc_mmap_file
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc        22 Jan 12 05:17 wrapper_checkpoint.txt
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc      4823 Jan 12 05:17 pilotlog.txt
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc    105176 Jan 12 05:17 log.48188456._000237.job.log.1
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc       188 Jan 12 05:17 output.list
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc       620 Jan 12 05:17 runtime_log
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc    143360 Jan 12 05:17 result.tar.gz
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc       647 Jan 12 05:17 UByLDm3aWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMfnKDmuPCDLm.diag
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc      8636 Jan 12 05:17 runtime_log.err
[2026-01-12 05:17:54] -rw-r--r--. 1 boinc boinc     21548 Jan 12 05:17 stderr.txt
[2026-01-12 05:17:54] No HITS result produced
[2026-01-12 05:17:54]  *** Contents of shared directory: ***
[2026-01-12 05:17:54] total 282200
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc 288214797 Jan 12 05:09 ATLAS.root_0
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc    592401 Jan 12 05:09 input.tar.gz
[2026-01-12 05:17:54] -rw-r--r--. 2 boinc boinc     15847 Jan 12 05:09 start_atlas.sh
[2026-01-12 05:17:54] -rw-------. 1 boinc boinc    143360 Jan 12 05:17 result.tar.gz
05:17:56 (2388561): run_atlas exited; CPU time 34.311092
05:17:56 (2388561): called boinc_finish(0)

</stderr_txt>
]]>

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