Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:39:05 (2539949): wrapper (7.7.26015): starting
23:39:05 (2539949): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 23:39:05] Arguments: --nthreads 12
[2026-01-12 23:39:05] Threads: 12
[2026-01-12 23:39:05] Checking for CVMFS
[2026-01-12 23:39:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 23:39:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 23:39:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 23:39:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 23:39:06] 2.13.3.0 8782 2582 176988 155068 3 570 41799986 46080000 25728 130560 0 12114716 99.791 8672060 28286 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-12 23:39:06] CVMFS is ok
[2026-01-12 23:39:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 23:39:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 23:39:06] Further information can be found at the LHC@home message board.
[2026-01-12 23:39:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 23:39:06] Checking for apptainer binary...
[2026-01-12 23:39:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 23:39:06] Running /usr/bin/apptainer --version
[2026-01-12 23:39:06] apptainer version 1.4.5-2.el9
[2026-01-12 23:39:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 23:39:06] mff2102.farm.particle.cz
[2026-01-12 23:39:06] apptainer works
[2026-01-12 23:39:06] Set ATHENA_PROC_NUMBER=12
[2026-01-12 23:39:06] Set ATHENA_CORE_NUMBER=12
[2026-01-12 23:39:06] Starting ATLAS job with PandaID=6966979401
[2026-01-12 23:39:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 01:13:41]  *** The last 200 lines of the pilot log: ***
[2026-01-13 01:13:41] 2026-01-13 00:11:28,062 | INFO     | monitor loop #374: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:28,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:29,157 | INFO     | time since job start (5517s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:30,572 | INFO     | monitor loop #375: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:30,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:31,163 | INFO     | time since job start (5519s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:33,079 | INFO     | monitor loop #376: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:33,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:33,175 | INFO     | time since job start (5521s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:35,182 | INFO     | time since job start (5523s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:35,584 | INFO     | monitor loop #377: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:35,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:37,188 | INFO     | time since job start (5525s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:38,093 | INFO     | monitor loop #378: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:38,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:39,195 | INFO     | time since job start (5527s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:40,601 | INFO     | monitor loop #379: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:40,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:41,205 | INFO     | time since job start (5529s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:43,106 | INFO     | monitor loop #380: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:43,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:43,262 | INFO     | PID=2546247 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 01:13:41] 2026-01-13 00:11:43,262 | INFO     | .. there are 27 such processes running
[2026-01-13 01:13:41] 2026-01-13 00:11:44,263 | INFO     | time since job start (5532s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:45,616 | INFO     | monitor loop #381: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:45,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:46,272 | INFO     | time since job start (5534s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:48,124 | INFO     | monitor loop #382: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:48,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:48,278 | INFO     | time since job start (5536s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:50,285 | INFO     | time since job start (5538s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:50,633 | INFO     | monitor loop #383: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:50,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:52,294 | INFO     | time since job start (5540s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:53,143 | INFO     | monitor loop #384: job 0:6966979401 is in state 'finished'
[2026-01-13 01:13:41] 2026-01-13 00:11:53,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:13:41] 2026-01-13 00:11:54,305 | INFO     | time since job start (5542s) is within the limit (349056.0s)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,123 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 01:13:41] 2026-01-13 00:11:55,160 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2757.0829791666656
[2026-01-13 01:13:41] 2026-01-13 00:11:55,205 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6966979401/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,206 | INFO     | extracted standard info from prmon json
[2026-01-13 01:13:41] 2026-01-13 00:11:55,206 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 01:13:41] 2026-01-13 00:11:55,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 01:13:41] 2026-01-13 00:11:55,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 01:13:41] 2026-01-13 00:11:55,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 01:13:41] 2026-01-13 00:11:55,213 | INFO     | fitting pss+swap vs Time
[2026-01-13 01:13:41] 2026-01-13 00:11:55,213 | INFO     | sum of square deviations: 177272588.98795226
[2026-01-13 01:13:41] 2026-01-13 00:11:55,213 | INFO     | sum of deviations: -1464756494.4698796
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | mean x: 1768260414.0120482
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | mean y: 2730021.4698795183
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | intersect: 14613397920.691294
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | chi2: 0.004491281080423812
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | current memory leak: -8.26 B/s (using 83 data points, chi2=0.00)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | could have reported an average CPU frequency of 2772 MHz (6 samples)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | ..............................
[2026-01-13 01:13:41] 2026-01-13 00:11:55,214 | INFO     | . Timing measurements:
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . get job = 0 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . initial setup = 1 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . payload setup = 9 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . stage-in = 0 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . payload execution = 5460 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . stage-out = 2 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | . log creation = 0 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,215 | INFO     | ..............................
[2026-01-13 01:13:41] 2026-01-13 00:11:55,378 | INFO     | 
[2026-01-13 01:13:41] 2026-01-13 00:11:55,381 | INFO     | job summary report
[2026-01-13 01:13:41] 2026-01-13 00:11:55,381 | INFO     | --------------------------------------------------
[2026-01-13 01:13:41] 2026-01-13 00:11:55,381 | INFO     | PanDA job id: 6966979401
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | task id: 48188456
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | errors: (none)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | pilot state: finished 
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | transexitcode: 0
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | exeerrorcode: 0
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | exeerrordiag: 
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | exitcode: 0
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | exitmsg: OK
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | cpuconsumptiontime: 34590 s
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | nevents: 400
[2026-01-13 01:13:41] 2026-01-13 00:11:55,382 | INFO     | neventsw: 0
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | pid: 2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | pgrp: 2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | corecount: 12
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | event service: False
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | sizes: {0: 2283887, 1: 2284142, 8: 2284404, 12: 2284432, 5473: 2311068, 5477: 2320068, 5479: 2320252, 5525: 2320446}
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | --------------------------------------------------
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | 
[2026-01-13 01:13:41] 2026-01-13 00:11:55,383 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 01:13:41] 2026-01-13 00:11:55,594 | INFO     | job 6966979401 has completed (purged errors)
[2026-01-13 01:13:41] 2026-01-13 00:11:55,594 | INFO     | overall cleanup function is called
[2026-01-13 01:13:41] 2026-01-13 00:11:56,620 | INFO     | --- collectZombieJob: --- 10, [2562767]
[2026-01-13 01:13:41] 2026-01-13 00:11:56,621 | INFO     | zombie collector waiting for pid 2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:56,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 01:13:41] 2026-01-13 00:11:56,621 | INFO     | collected zombie processes
[2026-01-13 01:13:41] 2026-01-13 00:11:56,621 | INFO     | will attempt to kill all subprocesses of pid=2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:57,413 | INFO     | process IDs to be killed: [2562767] (in reverse order)
[2026-01-13 01:13:41] 2026-01-13 00:11:57,829 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 01:13:41] 2026-01-13 00:11:57,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 01:13:41] 2026-01-13 00:11:57,868 | INFO     | did not find any defunct processes belonging to 2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:57,910 | INFO     | did not find any defunct processes belonging to 2562767
[2026-01-13 01:13:41] 2026-01-13 00:11:57,911 | INFO     | ready for new job
[2026-01-13 01:13:41] 2026-01-13 00:11:57,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 01:13:41] 2026-01-13 00:11:57,913 | INFO     | ***************************************
[2026-01-13 01:13:41] 2026-01-13 00:11:57,913 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 01:13:41] 2026-01-13 00:11:57,913 | INFO     | ***************************************
[2026-01-13 01:13:41] 2026-01-13 00:11:57,913 | INFO     | 
[2026-01-13 01:13:41] 2026-01-13 00:11:57,928 | INFO     | architecture information:
[2026-01-13 01:13:41] 2026-01-13 00:11:57,931 | INFO     | executing command: cat /etc/os-release
[2026-01-13 01:13:41] 2026-01-13 00:11:58,025 | INFO     | cat /etc/os-release:
[2026-01-13 01:13:41] NAME="CentOS Linux"
[2026-01-13 01:13:41] VERSION="7 (Core)"
[2026-01-13 01:13:41] ID="centos"
[2026-01-13 01:13:41] ID_LIKE="rhel fedora"
[2026-01-13 01:13:41] VERSION_ID="7"
[2026-01-13 01:13:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 01:13:41] ANSI_COLOR="0;31"
[2026-01-13 01:13:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 01:13:41] HOME_URL="https://www.centos.org/"
[2026-01-13 01:13:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 01:13:41] 
[2026-01-13 01:13:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 01:13:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 01:13:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 01:13:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 01:13:41] 
[2026-01-13 01:13:41] 2026-01-13 00:11:58,026 | INFO     | ***************************************
[2026-01-13 01:13:41] 2026-01-13 00:11:58,529 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2026-01-13 01:13:41] 2026-01-13 00:11:58,669 | INFO     | sufficient remaining disk space (1407529779200 B)
[2026-01-13 01:13:41] 2026-01-13 00:11:58,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 01:13:41] 2026-01-13 00:11:58,670 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 01:13:41] 2026-01-13 00:11:58,670 | INFO     | update_server=False
[2026-01-13 01:13:41] 2026-01-13 00:11:58,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 01:13:41] 2026-01-13 00:11:58,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 01:13:41] 2026-01-13 00:11:58,881 | INFO     | all job control threads have been joined
[2026-01-13 01:13:41] 2026-01-13 00:11:58,988 | INFO     | all payload control threads have been joined
[2026-01-13 01:13:41] 2026-01-13 00:11:59,148 | INFO     | all data control threads have been joined
[2026-01-13 01:13:41] 2026-01-13 00:11:59,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:13:41] 2026-01-13 00:11:59,170 | INFO     | aborting loop
[2026-01-13 01:13:41] 2026-01-13 00:11:59,676 | INFO     | [job] retrieve thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:11:59,823 | INFO     | [payload] validate_post thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:11:59,886 | INFO     | [job] control thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:11:59,994 | INFO     | [payload] control thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,154 | INFO     | [data] control thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,163 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,181 | INFO     | [job] job monitor thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:13:41] 2026-01-13 00:12:00,411 | INFO     | [job] validate thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,681 | INFO     | [data] copytool_out thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,829 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,849 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:00,856 | INFO     | [data] copytool_in thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:01,261 | INFO     | [payload] failed_post thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:01,402 | INFO     | [job] queue monitor thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:01,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 01:13:41] 2026-01-13 00:12:05,431 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:08,837 | INFO     | job.realtimelogging is not enabled
[2026-01-13 01:13:41] 2026-01-13 00:12:09,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 01:13:41] 2026-01-13 00:12:28,016 | INFO     | PID=2546247 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 01:13:41] 2026-01-13 00:12:28,016 | INFO     | .. there are 26 such processes running
[2026-01-13 01:13:41] 2026-01-13 00:12:28,017 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 01:13:41] 2026-01-13 00:12:28,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 01:13:41] 2026-01-13 00:12:28,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 01:13:41] 2026-01-13 00:12:40,997 | INFO     | [monitor] cgroup control has ended
[2026-01-13 01:13:41] 2026-01-13 00:12:41,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494602966848)>', '<ExcThread(monitor, started 140494050932480)>']
[2026-01-13 01:13:41] 2026-01-13 00:12:42,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 01:13:41] 2026-01-13 00:12:42,104 | INFO     | [monitor] control thread has ended
[2026-01-13 01:13:41] 2026-01-13 00:12:46,263 | INFO     | all workflow threads have been joined
[2026-01-13 01:13:41] 2026-01-13 00:12:46,263 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 01:13:41] 2026-01-13 00:12:46,263 | INFO     | traces error code: 0
[2026-01-13 01:13:41] 2026-01-13 00:12:46,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 01:13:41] 2026-01-13 00:12:46,553 [wrapper] ==== pilot stdout END ====
[2026-01-13 01:13:41] 2026-01-13 00:12:46,593 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 01:13:41] 2026-01-13 00:12:46,641 [wrapper] pilotpid: 2546247
[2026-01-13 01:13:41] 2026-01-13 00:12:46,673 [wrapper] Pilot exit status: 0
[2026-01-13 01:13:41] 2026-01-13 00:12:46,838 [wrapper] pandaids: 6966979401
[2026-01-13 01:13:41] 2026-01-13 00:12:47,190 [wrapper] cleanup supervisor_pilot 3024409 2546248
[2026-01-13 01:13:41] 2026-01-13 00:12:47,234 [wrapper] Test setup, not cleaning
[2026-01-13 01:13:41] 2026-01-13 00:12:47,280 [wrapper] apfmon messages muted
[2026-01-13 01:13:41] 2026-01-13 00:12:47,330 [wrapper] ==== wrapper stdout END ====
[2026-01-13 01:13:41] 2026-01-13 00:12:47,375 [wrapper] ==== wrapper stderr END ====
[2026-01-13 01:13:41]  *** Error codes and diagnostics ***
[2026-01-13 01:13:41]     "exeErrorCode": 0,
[2026-01-13 01:13:41]     "exeErrorDiag": "",
[2026-01-13 01:13:41]     "pilotErrorCode": 0,
[2026-01-13 01:13:41]     "pilotErrorDiag": "",
[2026-01-13 01:13:41]  *** Listing of results directory ***
[2026-01-13 01:13:41] total 472408
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 01:13:41] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc       100 Jan 12 23:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 01:13:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 23:39 run_atlas
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc       105 Jan 12 23:39 job.xml
[2026-01-13 01:13:41] -rw-r--r-- 2 boinc boinc 286811103 Jan 12 23:39 EVNT.48188454._000007.pool.root.1
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc      6675 Jan 12 23:39 init_data.xml
[2026-01-13 01:13:41] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:39 start_atlas.sh
[2026-01-13 01:13:41] drwxrwx--x 2 boinc boinc      4096 Jan 12 23:39 shared
[2026-01-13 01:13:41] -rw-r--r-- 2 boinc boinc    592405 Jan 12 23:39 input.tar.gz
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc         0 Jan 12 23:39 boinc_lockfile
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc      2621 Jan 12 23:39 pandaJob.out
[2026-01-13 01:13:41] -rw------- 1 boinc boinc    988531 Jan 12 23:39 agis_schedconf.cvmfs.json
[2026-01-13 01:13:41] -rw------- 1 boinc boinc   1516240 Jan 12 23:39 agis_ddmendpoints.agis.ALL.json
[2026-01-13 01:13:41] drwx------ 5 boinc boinc      4096 Jan 12 23:39 pilot3
[2026-01-13 01:13:41] -rw------- 1 boinc boinc 190622007 Jan 13 01:10 HITS.48188456._000162.pool.root.1
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc       529 Jan 13 01:10 boinc_task_state.xml
[2026-01-13 01:13:41] -rw------- 1 boinc boinc      1029 Jan 13 01:11 memory_monitor_summary.json
[2026-01-13 01:13:41] -rw------- 1 boinc boinc    425097 Jan 13 01:11 log.48188456._000162.job.log.tgz.1
[2026-01-13 01:13:41] -rw------- 1 boinc boinc      7773 Jan 13 01:11 heartbeat.json
[2026-01-13 01:13:41] -rw------- 1 boinc boinc        95 Jan 13 01:12 pilot_heartbeat.json
[2026-01-13 01:13:41] -rw------- 1 boinc boinc      4899 Jan 13 01:12 pilotlog.txt
[2026-01-13 01:13:41] -rw------- 1 boinc boinc    773487 Jan 13 01:12 log.48188456._000162.job.log.1
[2026-01-13 01:13:41] -rw------- 1 boinc boinc       357 Jan 13 01:12 output.list
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc       620 Jan 13 01:12 runtime_log
[2026-01-13 01:13:41] -rw------- 1 boinc boinc   1218560 Jan 13 01:12 result.tar.gz
[2026-01-13 01:13:41] -rw------- 1 boinc boinc       663 Jan 13 01:12 yQUKDmfaWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpenKDmLFHkJm.diag
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc      8880 Jan 13 01:12 runtime_log.err
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc        26 Jan 13 01:13 wrapper_checkpoint.txt
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc      8192 Jan 13 01:13 boinc_mmap_file
[2026-01-13 01:13:41] -rw-r--r-- 1 boinc boinc     22387 Jan 13 01:13 stderr.txt
[2026-01-13 01:13:42] HITS file was successfully produced:
[2026-01-13 01:13:42] -rw------- 1 boinc boinc 190622007 Jan 13 01:10 shared/HITS.pool.root.1
[2026-01-13 01:13:42]  *** Contents of shared directory: ***
[2026-01-13 01:13:42] total 468044
[2026-01-13 01:13:42] -rw-r--r-- 2 boinc boinc 286811103 Jan 12 23:39 ATLAS.root_0
[2026-01-13 01:13:42] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:39 start_atlas.sh
[2026-01-13 01:13:42] -rw-r--r-- 2 boinc boinc    592405 Jan 12 23:39 input.tar.gz
[2026-01-13 01:13:42] -rw------- 1 boinc boinc 190622007 Jan 13 01:10 HITS.pool.root.1
[2026-01-13 01:13:42] -rw------- 1 boinc boinc   1218560 Jan 13 01:12 result.tar.gz
01:13:43 (2539949): run_atlas exited; CPU time 34740.643170
01:13:43 (2539949): called boinc_finish(0)

</stderr_txt>
]]>

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