Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:42 (3641303): wrapper (7.7.26015): starting
21:39:42 (3641303): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 21:39:42] Arguments: --nthreads 3
[2026-01-12 21:39:42] Threads: 3
[2026-01-12 21:39:42] Checking for CVMFS
[2026-01-12 21:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 21:39:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 21:39:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 21:39:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 21:39:43] 2.9.2.0 3563789 581 52868 155065 3 68 23197341 36864001 0 130560 0 203898 99.981 21797 16728 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 21:39:43] CVMFS is ok
[2026-01-12 21:39:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 21:39:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 21:39:43] Further information can be found at the LHC@home message board.
[2026-01-12 21:39:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 21:39:43] Checking for apptainer binary...
[2026-01-12 21:39:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 21:39:43] Running /usr/bin/apptainer --version
[2026-01-12 21:39:43] apptainer version 1.4.1-1.1
[2026-01-12 21:39:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 21:39:43] thA349
[2026-01-12 21:39:43] apptainer works
[2026-01-12 21:39:43] Set ATHENA_PROC_NUMBER=3
[2026-01-12 21:39:43] Set ATHENA_CORE_NUMBER=3
[2026-01-12 21:39:43] Starting ATLAS job with PandaID=6966979397
[2026-01-12 21:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:55:08]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:55:08] 2026-01-12 21:54:38,043 | INFO     | 
[2026-01-12 22:55:08] 2026-01-12 21:54:38,044 | INFO     | architecture information:
[2026-01-12 22:55:08] 2026-01-12 21:54:38,044 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:55:08] 2026-01-12 21:54:38,052 | INFO     | cat /etc/os-release:
[2026-01-12 22:55:08] NAME="CentOS Linux"
[2026-01-12 22:55:08] VERSION="7 (Core)"
[2026-01-12 22:55:08] ID="centos"
[2026-01-12 22:55:08] ID_LIKE="rhel fedora"
[2026-01-12 22:55:08] VERSION_ID="7"
[2026-01-12 22:55:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:55:08] ANSI_COLOR="0;31"
[2026-01-12 22:55:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:55:08] HOME_URL="https://www.centos.org/"
[2026-01-12 22:55:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:55:08] 
[2026-01-12 22:55:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:55:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:55:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:55:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:55:08] 
[2026-01-12 22:55:08] 2026-01-12 21:54:38,052 | INFO     | ***************************************
[2026-01-12 22:55:08] 2026-01-12 21:54:38,555 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | INFO     | sufficient remaining disk space (282648903680 B)
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | INFO     | update_server=False
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | INFO     | aborting loop
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:55:08] 2026-01-12 21:54:38,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:55:08] 2026-01-12 21:54:38,595 | INFO     | all job control threads have been joined
[2026-01-12 22:55:08] 2026-01-12 21:54:39,574 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,574 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,574 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,583 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,587 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,600 | INFO     | all payload control threads have been joined
[2026-01-12 22:55:08] 2026-01-12 21:54:39,600 | INFO     | [job] control thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:39,624 | INFO     | all data control threads have been joined
[2026-01-12 22:55:08] 2026-01-12 21:54:39,625 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,248 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,452 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,575 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,606 | INFO     | [payload] control thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,630 | INFO     | [data] control thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:40,969 | INFO     | [job] validate thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:41,080 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:41,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:55:08] 2026-01-12 21:54:45,631 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:47,358 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-12 22:55:08] 2026-01-12 21:54:48,985 | INFO     | job.realtimelogging is not enabled
[2026-01-12 22:55:08] 2026-01-12 21:54:49,990 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:55:08] 2026-01-12 21:54:53,075 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:55:08] 2026-01-12 21:54:53,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725596043072)>', '<ExcThread(monitor, started 139725235001088)>']
[2026-01-12 22:55:08] 2026-01-12 21:54:58,937 | INFO     | all workflow threads have been joined
[2026-01-12 22:55:08] 2026-01-12 21:54:58,937 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:55:08] 2026-01-12 21:54:58,937 | INFO     | traces error code: 0
[2026-01-12 22:55:08] 2026-01-12 21:54:58,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:55:08] 2026-01-12 21:55:08,470 | INFO     | PID=3645022 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:55:08] 2026-01-12 21:55:08,470 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:55:08] 2026-01-12 21:55:08,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:55:08] 2026-01-12 21:55:08,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:55:08] 2026-01-12 21:55:08,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:55:08] 2026-01-12 21:55:08,471 | CRITICAL | thread 'MainThread' is not alive
[2026-01-12 22:55:08] 2026-01-12 21:55:08,471 | INFO     | [monitor] control thread has ended
[2026-01-12 22:55:08] 2026-01-12 21:55:08,515 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:55:08] 2026-01-12 21:55:08,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:55:08] 2026-01-12 21:55:08,520 [wrapper] pilotpid: 3645022
[2026-01-12 22:55:08] 2026-01-12 21:55:08,522 [wrapper] Pilot exit status: 0
[2026-01-12 22:55:08] 2026-01-12 21:55:08,529 [wrapper] pandaids: 6966979397
[2026-01-12 22:55:08] 2026-01-12 21:55:08,545 [wrapper] cleanup supervisor_pilot 3666085 3645023
[2026-01-12 22:55:08] 2026-01-12 21:55:08,547 [wrapper] Test setup, not cleaning
[2026-01-12 22:55:08] 2026-01-12 21:55:08,549 [wrapper] apfmon messages muted
[2026-01-12 22:55:08] 2026-01-12 21:55:08,551 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:55:08] 2026-01-12 21:55:08,554 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:55:08]  *** Error codes and diagnostics ***
[2026-01-12 22:55:08]     "exeErrorCode": 0,
[2026-01-12 22:55:08]     "exeErrorDiag": "",
[2026-01-12 22:55:08]     "pilotErrorCode": 0,
[2026-01-12 22:55:08]     "pilotErrorDiag": "",
[2026-01-12 22:55:08]  *** Listing of results directory ***
[2026-01-12 22:55:08] total 475948
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-12 22:55:08] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc       100 Jan 12 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:55:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 21:39 run_atlas
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc       105 Jan 12 21:39 job.xml
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc 286811103 Jan 12 21:39 EVNT.48188454._000007.pool.root.1
[2026-01-12 22:55:08] drwxrwx--x 2 boinc boinc      4096 Jan 12 21:39 shared
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc    592404 Jan 12 21:39 input.tar.gz
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:39 start_atlas.sh
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc         0 Jan 12 21:39 boinc_setup_complete
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      6445 Jan 12 21:39 init_data.xml
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc         0 Jan 12 21:39 boinc_lockfile
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      2621 Jan 12 21:39 pandaJob.out
[2026-01-12 22:55:08] -rw------- 1 boinc boinc    988547 Jan 12 21:39 agis_schedconf.cvmfs.json
[2026-01-12 22:55:08] -rw------- 1 boinc boinc   1516240 Jan 12 21:39 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:55:08] drwx------ 5 boinc boinc      4096 Jan 12 21:39 pilot3
[2026-01-12 22:55:08] -rw------- 1 boinc boinc        95 Jan 12 22:54 pilot_heartbeat.json
[2026-01-12 22:55:08] -rw------- 1 boinc boinc 194788055 Jan 12 22:54 HITS.48188456._000158.pool.root.1
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc       529 Jan 12 22:54 boinc_task_state.xml
[2026-01-12 22:55:08] -rw------- 1 boinc boinc      1018 Jan 12 22:54 memory_monitor_summary.json
[2026-01-12 22:55:08] -rw------- 1 boinc boinc    271314 Jan 12 22:54 log.48188456._000158.job.log.tgz.1
[2026-01-12 22:55:08] -rw------- 1 boinc boinc      7742 Jan 12 22:54 heartbeat.json
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      8192 Jan 12 22:55 boinc_mmap_file
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc        27 Jan 12 22:55 wrapper_checkpoint.txt
[2026-01-12 22:55:08] -rw------- 1 boinc boinc       817 Jan 12 22:55 pilotlog.txt
[2026-01-12 22:55:08] -rw------- 1 boinc boinc    664287 Jan 12 22:55 log.48188456._000158.job.log.1
[2026-01-12 22:55:08] -rw------- 1 boinc boinc       357 Jan 12 22:55 output.list
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc       620 Jan 12 22:55 runtime_log
[2026-01-12 22:55:08] -rw------- 1 boinc boinc    952320 Jan 12 22:55 result.tar.gz
[2026-01-12 22:55:08] -rw------- 1 boinc boinc       658 Jan 12 22:55 zbPKDmfaWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlenKDmrwCxMn.diag
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      8897 Jan 12 22:55 runtime_log.err
[2026-01-12 22:55:08] -rw-r--r-- 1 boinc boinc      9314 Jan 12 22:55 stderr.txt
[2026-01-12 22:55:08] HITS file was successfully produced:
[2026-01-12 22:55:08] -rw------- 1 boinc boinc 194788055 Jan 12 22:54 shared/HITS.pool.root.1
[2026-01-12 22:55:08]  *** Contents of shared directory: ***
[2026-01-12 22:55:08] total 471852
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc 286811103 Jan 12 21:39 ATLAS.root_0
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc    592404 Jan 12 21:39 input.tar.gz
[2026-01-12 22:55:08] -rw-r--r-- 2 boinc boinc     15847 Jan 12 21:39 start_atlas.sh
[2026-01-12 22:55:08] -rw------- 1 boinc boinc 194788055 Jan 12 22:54 HITS.pool.root.1
[2026-01-12 22:55:08] -rw------- 1 boinc boinc    952320 Jan 12 22:55 result.tar.gz
22:55:10 (3641303): run_atlas exited; CPU time 12803.118608
22:55:10 (3641303): called boinc_finish(0)

</stderr_txt>
]]>

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