Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:46:58 (3484487): wrapper (7.7.26015): starting
22:46:58 (3484487): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 22:46:58] Arguments: --nthreads 4
[2026-01-12 22:46:58] Threads: 4
[2026-01-12 22:46:58] Checking for CVMFS
[2026-01-12 22:46:58] No cvmfs_config command found, will try listing directly
[2026-01-12 22:46:58] CVMFS is ok
[2026-01-12 22:46:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 22:46:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 22:46:58] Further information can be found at the LHC@home message board.
[2026-01-12 22:46:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 22:46:58] Checking for apptainer binary...
[2026-01-12 22:46:58] which: no apptainer in ((null))
[2026-01-12 22:46:58] apptainer is not installed, using version from CVMFS
[2026-01-12 22:46:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 22:46:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-12 22:46:58] apptainer works
[2026-01-12 22:46:58] Set ATHENA_PROC_NUMBER=4
[2026-01-12 22:46:58] Set ATHENA_CORE_NUMBER=4
[2026-01-12 22:46:58] Starting ATLAS job with PandaID=6966979255
[2026-01-12 22:46:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 01:06:28]  *** The last 200 lines of the pilot log: ***
[2026-01-13 01:06:28] 2026-01-12 23:49:21,470 | INFO     | executing command: lscpu
[2026-01-13 01:06:28] 2026-01-12 23:49:21,559 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 01:06:28] 2026-01-12 23:49:23,214 | INFO     | time since job start (7331s) is within the limit (349056.0s)
[2026-01-13 01:06:28] 2026-01-12 23:49:23,757 | INFO     | monitor loop #512: job 0:6966979255 is in state 'finished'
[2026-01-13 01:06:28] 2026-01-12 23:49:23,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:06:28] 2026-01-12 23:49:25,219 | INFO     | time since job start (7333s) is within the limit (349056.0s)
[2026-01-13 01:06:28] 2026-01-12 23:49:26,261 | INFO     | monitor loop #513: job 0:6966979255 is in state 'finished'
[2026-01-13 01:06:28] 2026-01-12 23:49:26,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,224 | INFO     | time since job start (7335s) is within the limit (349056.0s)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,677 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 01:06:28] 2026-01-12 23:49:27,698 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2718.966562500001
[2026-01-13 01:06:28] 2026-01-12 23:49:27,722 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6966979255/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,723 | INFO     | extracted standard info from prmon json
[2026-01-13 01:06:28] 2026-01-12 23:49:27,723 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 01:06:28] 2026-01-12 23:49:27,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 01:06:28] 2026-01-12 23:49:27,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 01:06:28] 2026-01-12 23:49:27,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 01:06:28] 2026-01-12 23:49:27,726 | INFO     | fitting pss+swap vs Time
[2026-01-13 01:06:28] 2026-01-12 23:49:27,726 | INFO     | sum of square deviations: 535786790.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,727 | INFO     | sum of deviations: 3691038935.0000005
[2026-01-13 01:06:28] 2026-01-12 23:49:27,727 | INFO     | mean x: 1768258093.5
[2026-01-13 01:06:28] 2026-01-12 23:49:27,727 | INFO     | mean y: 2376194.2333333334
[2026-01-13 01:06:28] 2026-01-12 23:49:27,727 | INFO     | intersect: -12179166150.693407
[2026-01-13 01:06:28] 2026-01-12 23:49:27,727 | INFO     | chi2: 1.316853866030284
[2026-01-13 01:06:28] 2026-01-12 23:49:27,728 | INFO     | sum of square deviations: 471562330.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,728 | INFO     | sum of deviations: 3527819649.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,728 | INFO     | mean x: 1768257941.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | mean y: 2375809.3652173914
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | intersect: -13226193802.54607
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | chi2: 1.318072525917759
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | current chi2=1.318072525917759 (change=-0.09254328964752592 %)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | right removable region: 114
[2026-01-13 01:06:28] 2026-01-12 23:49:27,729 | INFO     | sum of square deviations: 471562330.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,730 | INFO     | sum of deviations: -9771390651.999998
[2026-01-13 01:06:28] 2026-01-12 23:49:27,730 | INFO     | mean x: 1768258246.0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,730 | INFO     | mean y: 2407310.3130434784
[2026-01-13 01:06:28] 2026-01-12 23:49:27,730 | INFO     | intersect: 36643039939.48491
[2026-01-13 01:06:28] 2026-01-12 23:49:27,730 | INFO     | chi2: 0.03851435156052522
[2026-01-13 01:06:28] 2026-01-12 23:49:27,731 | INFO     | current chi2=0.03851435156052522 (change=97.07527520296321 %)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,731 | INFO     | sum of square deviations: 412686807.5
[2026-01-13 01:06:28] 2026-01-12 23:49:27,731 | INFO     | sum of deviations: -7417134631.000001
[2026-01-13 01:06:28] 2026-01-12 23:49:27,731 | INFO     | mean x: 1768258398.5
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | mean y: 2401194.5454545454
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | intersect: 31782943643.96928
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | chi2: 0.03425113538963656
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | current chi2=0.03425113538963656 (change=11.06916252812675 %)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | left removable region: 20
[2026-01-13 01:06:28] 2026-01-12 23:49:27,732 | INFO     | sum of square deviations: 257521107.5
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | sum of deviations: -2594394568.5000005
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | mean x: 1768258520.5
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | mean y: 2387255.6914893617
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | intersect: 17816695161.65235
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | chi2: 0.014287249761958873
[2026-01-13 01:06:28] 2026-01-12 23:49:27,733 | INFO     | current memory leak: -10.07 B/s (using 94 data points, chi2=0.01)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | could have reported an average CPU frequency of 2727 MHz (8 samples)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | ..............................
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . Timing measurements:
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . get job = 0 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . initial setup = 1 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . payload setup = 8 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . stage-in = 0 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . payload execution = 7297 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,734 | INFO     | . stage-out = 0 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,735 | INFO     | . log creation = 0 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,735 | INFO     | ..............................
[2026-01-13 01:06:28] 2026-01-12 23:49:27,829 | INFO     | 
[2026-01-13 01:06:28] 2026-01-12 23:49:27,829 | INFO     | job summary report
[2026-01-13 01:06:28] 2026-01-12 23:49:27,829 | INFO     | --------------------------------------------------
[2026-01-13 01:06:28] 2026-01-12 23:49:27,829 | INFO     | PanDA job id: 6966979255
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | task id: 48188456
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | errors: (none)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | pilot state: finished 
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | transexitcode: 0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | exeerrorcode: 0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | exeerrordiag: 
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | exitcode: 0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | exitmsg: OK
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | cpuconsumptiontime: 27950 s
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | nevents: 400
[2026-01-13 01:06:28] 2026-01-12 23:49:27,830 | INFO     | neventsw: 0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | pid: 3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | pgrp: 3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | corecount: 4
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | event service: False
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | sizes: {0: 2283891, 1: 2284146, 7: 2284408, 12: 2284436, 7309: 2312194, 7310: 2312193, 7311: 2321399, 7312: 2321455, 7318: 2321649}
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | --------------------------------------------------
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | 
[2026-01-13 01:06:28] 2026-01-12 23:49:27,831 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-13 01:06:28] 2026-01-12 23:49:27,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 01:06:28] 2026-01-12 23:49:27,866 | INFO     | job 6966979255 has completed (purged errors)
[2026-01-13 01:06:28] 2026-01-12 23:49:27,866 | INFO     | overall cleanup function is called
[2026-01-13 01:06:28] 2026-01-12 23:49:28,876 | INFO     | --- collectZombieJob: --- 10, [3495850]
[2026-01-13 01:06:28] 2026-01-12 23:49:28,876 | INFO     | zombie collector waiting for pid 3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:28,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 01:06:28] 2026-01-12 23:49:28,876 | INFO     | collected zombie processes
[2026-01-13 01:06:28] 2026-01-12 23:49:28,876 | INFO     | will attempt to kill all subprocesses of pid=3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:29,595 | INFO     | process IDs to be killed: [3495850] (in reverse order)
[2026-01-13 01:06:28] 2026-01-12 23:49:29,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 01:06:28] 2026-01-12 23:49:29,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 01:06:28] 2026-01-12 23:49:29,848 | INFO     | did not find any defunct processes belonging to 3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:29,876 | INFO     | did not find any defunct processes belonging to 3495850
[2026-01-13 01:06:28] 2026-01-12 23:49:29,876 | INFO     | ready for new job
[2026-01-13 01:06:28] 2026-01-12 23:49:29,876 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 01:06:28] 2026-01-12 23:49:29,878 | INFO     | ***************************************
[2026-01-13 01:06:28] 2026-01-12 23:49:29,878 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 01:06:28] 2026-01-12 23:49:29,878 | INFO     | ***************************************
[2026-01-13 01:06:28] 2026-01-12 23:49:29,879 | INFO     | 
[2026-01-13 01:06:28] 2026-01-12 23:49:29,887 | INFO     | architecture information:
[2026-01-13 01:06:28] 2026-01-12 23:49:29,887 | INFO     | executing command: cat /etc/os-release
[2026-01-13 01:06:28] 2026-01-12 23:49:29,907 | INFO     | cat /etc/os-release:
[2026-01-13 01:06:28] NAME="CentOS Linux"
[2026-01-13 01:06:28] VERSION="7 (Core)"
[2026-01-13 01:06:28] ID="centos"
[2026-01-13 01:06:28] ID_LIKE="rhel fedora"
[2026-01-13 01:06:28] VERSION_ID="7"
[2026-01-13 01:06:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 01:06:28] ANSI_COLOR="0;31"
[2026-01-13 01:06:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 01:06:28] HOME_URL="https://www.centos.org/"
[2026-01-13 01:06:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 01:06:28] 
[2026-01-13 01:06:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 01:06:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 01:06:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 01:06:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 01:06:28] 
[2026-01-13 01:06:28] 2026-01-12 23:49:29,908 | INFO     | ***************************************
[2026-01-13 01:06:28] 2026-01-12 23:49:30,411 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-13 01:06:28] 2026-01-12 23:49:30,429 | INFO     | sufficient remaining disk space (3367816396800 B)
[2026-01-13 01:06:28] 2026-01-12 23:49:30,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 01:06:28] 2026-01-12 23:49:30,429 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 01:06:28] 2026-01-12 23:49:30,429 | INFO     | update_server=False
[2026-01-13 01:06:28] 2026-01-12 23:49:30,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 01:06:28] 2026-01-12 23:49:30,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:06:28] 2026-01-12 23:49:30,430 | INFO     | aborting loop
[2026-01-13 01:06:28] 2026-01-12 23:49:30,446 | INFO     | all data control threads have been joined
[2026-01-13 01:06:28] 2026-01-12 23:49:30,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 01:06:28] 2026-01-12 23:49:31,435 | INFO     | [job] job monitor thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,435 | INFO     | [job] retrieve thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,451 | INFO     | [data] control thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,588 | INFO     | [payload] validate_post thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,675 | INFO     | all payload control threads have been joined
[2026-01-13 01:06:28] 2026-01-12 23:49:31,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,877 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:31,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 01:06:28] 2026-01-12 23:49:31,984 | INFO     | [data] copytool_in thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,093 | INFO     | all job control threads have been joined
[2026-01-13 01:06:28] 2026-01-12 23:49:32,430 | INFO     | [payload] failed_post thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,635 | INFO     | [job] validate thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,680 | INFO     | [payload] control thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:06:28] 2026-01-12 23:49:32,848 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,871 | INFO     | [data] copytool_out thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:32,900 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:33,098 | INFO     | [job] control thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:33,844 | INFO     | [job] queue monitor thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:49:35,979 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 01:06:28] 2026-01-12 23:50:00,894 | INFO     | PID=3488535 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 01:06:28] 2026-01-12 23:50:00,894 | INFO     | .. there are 5 such processes running
[2026-01-13 01:06:28] 2026-01-12 23:50:00,895 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 01:06:28] 2026-01-12 23:50:00,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 01:06:28] 2026-01-12 23:50:00,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 01:06:28] 2026-01-12 23:50:22,540 | INFO     | [monitor] cgroup control has ended
[2026-01-13 01:06:28] 2026-01-12 23:50:22,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23119706511168)>', '<ExcThread(monitor, started 23119265777408)>']
[2026-01-13 01:06:28] 2026-01-12 23:50:22,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 01:06:28] 2026-01-12 23:50:22,998 | INFO     | [monitor] control thread has ended
[2026-01-13 01:06:28] 2026-01-12 23:50:27,861 | INFO     | all workflow threads have been joined
[2026-01-13 01:06:28] 2026-01-12 23:50:27,861 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 01:06:28] 2026-01-12 23:50:27,862 | INFO     | traces error code: 0
[2026-01-13 01:06:28] 2026-01-12 23:50:27,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 01:06:28] 2026-01-12 23:50:27,989 [wrapper] ==== pilot stdout END ====
[2026-01-13 01:06:28] 2026-01-12 23:50:27,992 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 01:06:28] 2026-01-12 23:50:27,996 [wrapper] pilotpid: 3488535
[2026-01-13 01:06:28] 2026-01-12 23:50:28,000 [wrapper] Pilot exit status: 0
[2026-01-13 01:06:28] 2026-01-12 23:50:28,013 [wrapper] pandaids: 6966979255
[2026-01-13 01:06:28] 2026-01-12 23:50:28,162 [wrapper] cleanup supervisor_pilot 3663403 3488536
[2026-01-13 01:06:28] 2026-01-12 23:50:28,166 [wrapper] Test setup, not cleaning
[2026-01-13 01:06:28] 2026-01-12 23:50:28,170 [wrapper] apfmon messages muted
[2026-01-13 01:06:28] 2026-01-12 23:50:28,173 [wrapper] ==== wrapper stdout END ====
[2026-01-13 01:06:28] 2026-01-12 23:50:28,177 [wrapper] ==== wrapper stderr END ====
[2026-01-13 01:06:28]  *** Error codes and diagnostics ***
[2026-01-13 01:06:28]     "exeErrorCode": 0,
[2026-01-13 01:06:28]     "exeErrorDiag": "",
[2026-01-13 01:06:28]     "pilotErrorCode": 0,
[2026-01-13 01:06:28]     "pilotErrorDiag": "",
[2026-01-13 01:06:28]  *** Listing of results directory ***
[2026-01-13 01:06:28] total 480272
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc    579449 Jan 12 13:52 pilot3.tar.gz
[2026-01-13 01:06:28] -rwx------ 1 boinc boinc     36322 Jan 12 13:52 runpilot2-wrapper.sh
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc      5112 Jan 12 13:52 queuedata.json
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc       100 Jan 12 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 01:06:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 22:46 run_atlas
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc       105 Jan 12 22:46 job.xml
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc      6692 Jan 12 22:46 init_data.xml
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc 287617624 Jan 12 22:46 EVNT.48188454._000001.pool.root.1
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc     15847 Jan 12 22:46 start_atlas.sh
[2026-01-13 01:06:28] drwxrwx--x 2 boinc boinc      4096 Jan 12 22:46 shared
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc    592391 Jan 12 22:46 input.tar.gz
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc         0 Jan 12 22:46 boinc_lockfile
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc      2617 Jan 12 22:46 pandaJob.out
[2026-01-13 01:06:28] -rw------- 1 boinc boinc    988547 Jan 12 22:47 agis_schedconf.cvmfs.json
[2026-01-13 01:06:28] -rw------- 1 boinc boinc   1516240 Jan 12 22:47 agis_ddmendpoints.agis.ALL.json
[2026-01-13 01:06:28] drwx------ 5 boinc boinc      4096 Jan 12 22:47 pilot3
[2026-01-13 01:06:28] -rw------- 1 boinc boinc 197491304 Jan 13 00:48 HITS.48188456._000016.pool.root.1
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc       529 Jan 13 00:49 boinc_task_state.xml
[2026-01-13 01:06:28] -rw------- 1 boinc boinc      1022 Jan 13 00:49 memory_monitor_summary.json
[2026-01-13 01:06:28] -rw------- 1 boinc boinc    340031 Jan 13 00:49 log.48188456._000016.job.log.tgz.1
[2026-01-13 01:06:28] -rw------- 1 boinc boinc      7766 Jan 13 00:49 heartbeat.json
[2026-01-13 01:06:28] -rw------- 1 boinc boinc        95 Jan 13 00:50 pilot_heartbeat.json
[2026-01-13 01:06:28] -rw------- 1 boinc boinc      4835 Jan 13 00:50 pilotlog.txt
[2026-01-13 01:06:28] -rw------- 1 boinc boinc   1047069 Jan 13 00:50 log.48188456._000016.job.log.1
[2026-01-13 01:06:28] -rw------- 1 boinc boinc       357 Jan 13 00:50 output.list
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc       620 Jan 13 00:50 runtime_log
[2026-01-13 01:06:28] -rw------- 1 boinc boinc   1402880 Jan 13 00:50 result.tar.gz
[2026-01-13 01:06:28] -rw------- 1 boinc boinc       662 Jan 13 00:50 u8uLDm5ZWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlcnKDmoNZmkm.diag
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc      9222 Jan 13 00:50 runtime_log.err
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc        26 Jan 13 01:06 wrapper_checkpoint.txt
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc      8192 Jan 13 01:06 boinc_mmap_file
[2026-01-13 01:06:28] -rw-r--r-- 1 boinc boinc     21197 Jan 13 01:06 stderr.txt
[2026-01-13 01:06:28] HITS file was successfully produced:
[2026-01-13 01:06:28] -rw------- 1 boinc boinc 197491304 Jan 13 00:48 shared/HITS.pool.root.1
[2026-01-13 01:06:28]  *** Contents of shared directory: ***
[2026-01-13 01:06:28] total 475720
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc 287617624 Jan 12 22:46 ATLAS.root_0
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc     15847 Jan 12 22:46 start_atlas.sh
[2026-01-13 01:06:28] -rw-r--r-- 2 boinc boinc    592391 Jan 12 22:46 input.tar.gz
[2026-01-13 01:06:28] -rw------- 1 boinc boinc 197491304 Jan 13 00:48 HITS.pool.root.1
[2026-01-13 01:06:28] -rw------- 1 boinc boinc   1402880 Jan 13 00:50 result.tar.gz
01:06:29 (3484487): run_atlas exited; CPU time 28394.900779
01:06:29 (3484487): called boinc_finish(0)

</stderr_txt>
]]>

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