Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:51:45 (32725): wrapper (7.7.26015): starting
13:51:45 (32725): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 13:51:45] Arguments: --nthreads 8
[2026-01-12 13:51:45] Threads: 8
[2026-01-12 13:51:45] Checking for CVMFS
[2026-01-12 13:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 13:51:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 13:51:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 13:51:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 13:51:52] 2.11.2.0 15502 39741 126008 155053 2 11 13391800 25165824 96 130560 0 17463446 99.865 9958074 3516 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 13:51:52] CVMFS is ok
[2026-01-12 13:51:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 13:51:52] Checking for apptainer binary...
[2026-01-12 13:51:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 13:51:52] Running /usr/bin/apptainer --version
[2026-01-12 13:51:52] apptainer version 1.3.2-1.el7
[2026-01-12 13:51:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 13:52:15] cg-vwn488.simple-grid.lan
[2026-01-12 13:52:15] apptainer works
[2026-01-12 13:52:15] Set ATHENA_PROC_NUMBER=8
[2026-01-12 13:52:15] Set ATHENA_CORE_NUMBER=8
[2026-01-12 13:52:15] Starting ATLAS job with PandaID=6966979455
[2026-01-12 13:52:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:41:54]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:41:54] 2026-01-12 16:41:16,213 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6966979455/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,213 | INFO     | extracted standard info from prmon json
[2026-01-12 17:41:54] 2026-01-12 16:41:16,213 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:41:54] 2026-01-12 16:41:16,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:41:54] 2026-01-12 16:41:16,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 17:41:54] 2026-01-12 16:41:16,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 17:41:54] 2026-01-12 16:41:16,218 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:41:54] 2026-01-12 16:41:16,227 | INFO     | sum of square deviations: 2912836010.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,229 | INFO     | sum of deviations: 119593707197.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,229 | INFO     | mean x: 1768229524.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,230 | INFO     | mean y: 2428507.962085308
[2026-01-12 17:41:54] 2026-01-12 16:41:16,230 | INFO     | intersect: -72596620399.82271
[2026-01-12 17:41:54] 2026-01-12 16:41:16,230 | INFO     | chi2: 8.987387929554707
[2026-01-12 17:41:54] 2026-01-12 16:41:16,231 | INFO     | sum of square deviations: 2710627567.5
[2026-01-12 17:41:54] 2026-01-12 16:41:16,232 | INFO     | sum of deviations: 131343480318.50002
[2026-01-12 17:41:54] 2026-01-12 16:41:16,232 | INFO     | mean x: 1768229371.5
[2026-01-12 17:41:54] 2026-01-12 16:41:16,233 | INFO     | mean y: 2437155.9077669904
[2026-01-12 17:41:54] 2026-01-12 16:41:16,233 | INFO     | intersect: -85677131088.28404
[2026-01-12 17:41:54] 2026-01-12 16:41:16,233 | INFO     | chi2: 8.230613633504388
[2026-01-12 17:41:54] 2026-01-12 16:41:16,233 | INFO     | current chi2=8.230613633504388 (change=8.420403146966574 %)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,233 | INFO     | right removable region: 205
[2026-01-12 17:41:54] 2026-01-12 16:41:16,234 | INFO     | sum of square deviations: 2710627567.5
[2026-01-12 17:41:54] 2026-01-12 16:41:16,235 | INFO     | sum of deviations: 44920851826.99999
[2026-01-12 17:41:54] 2026-01-12 16:41:16,236 | INFO     | mean x: 1768229676.5
[2026-01-12 17:41:54] 2026-01-12 16:41:16,236 | INFO     | mean y: 2484795.6796116503
[2026-01-12 17:41:54] 2026-01-12 16:41:16,236 | INFO     | intersect: -29300833833.00936
[2026-01-12 17:41:54] 2026-01-12 16:41:16,236 | INFO     | chi2: 3.698688240422172
[2026-01-12 17:41:54] 2026-01-12 16:41:16,236 | INFO     | current chi2=3.698688240422172 (change=58.845792910983995 %)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,237 | INFO     | sum of square deviations: 2518000700.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,238 | INFO     | sum of deviations: -9246914665.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,239 | INFO     | mean x: 1768229829.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,239 | INFO     | mean y: 2527602.2039800994
[2026-01-12 17:41:54] 2026-01-12 16:41:16,239 | INFO     | intersect: 6496040625.004388
[2026-01-12 17:41:54] 2026-01-12 16:41:16,239 | INFO     | chi2: 1.1311695545482556
[2026-01-12 17:41:54] 2026-01-12 16:41:16,239 | INFO     | current chi2=1.1311695545482556 (change=69.4170073004276 %)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,240 | INFO     | sum of square deviations: 2334722845.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,241 | INFO     | sum of deviations: -24838174163.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,242 | INFO     | mean x: 1768229981.5
[2026-01-12 17:41:54] 2026-01-12 16:41:16,242 | INFO     | mean y: 2540510.5714285714
[2026-01-12 17:41:54] 2026-01-12 16:41:16,242 | INFO     | intersect: 18814025708.822132
[2026-01-12 17:41:54] 2026-01-12 16:41:16,242 | INFO     | chi2: 0.8817179364703993
[2026-01-12 17:41:54] 2026-01-12 16:41:16,242 | INFO     | current chi2=0.8817179364703993 (change=22.052539964044332 %)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,243 | INFO     | left removable region: 30
[2026-01-12 17:41:54] 2026-01-12 16:41:16,251 | INFO     | sum of square deviations: 1661798600.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,253 | INFO     | sum of deviations: -10300393388.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,253 | INFO     | mean x: 1768230256.0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,253 | INFO     | mean y: 2552566.245714286
[2026-01-12 17:41:54] 2026-01-12 16:41:16,253 | INFO     | intersect: 10962645586.762129
[2026-01-12 17:41:54] 2026-01-12 16:41:16,253 | INFO     | chi2: 0.012730159042960154
[2026-01-12 17:41:54] 2026-01-12 16:41:16,254 | INFO     | current memory leak: -6.20 B/s (using 175 data points, chi2=0.01)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,254 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,254 | INFO     | ..............................
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . Timing measurements:
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . get job = 0 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . initial setup = 8 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . payload setup = 158 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . stage-in = 0 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . payload execution = 13005 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . stage-out = 3 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | . log creation = 1 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,255 | INFO     | ..............................
[2026-01-12 17:41:54] 2026-01-12 16:41:16,359 | INFO     | time since job start (13505s) is within the limit (349056.0s)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,396 | INFO     | 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,396 | INFO     | job summary report
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | --------------------------------------------------
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | PanDA job id: 6966979455
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | task id: 48188456
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | errors: (none)
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | pilot state: finished 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | transexitcode: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | exeerrorcode: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | exeerrordiag: 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,397 | INFO     | exitcode: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | exitmsg: OK
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | cpuconsumptiontime: 47221 s
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | nevents: 400
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | neventsw: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | pid: 10834
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | pgrp: 10834
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | corecount: 8
[2026-01-12 17:41:54] 2026-01-12 16:41:16,398 | INFO     | event service: False
[2026-01-12 17:41:54] 2026-01-12 16:41:16,399 | INFO     | sizes: {0: 2283885, 1: 2284140, 12: 2284140, 23: 2284168, 34: 2284196, 44: 2284224, 55: 2284380, 66: 2284408, 76: 2284436, 87: 2284492, 98: 2284520, 109: 2284828, 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,399 | INFO     | --------------------------------------------------
[2026-01-12 17:41:54] 2026-01-12 16:41:16,399 | INFO     | 
[2026-01-12 17:41:54] 2026-01-12 16:41:16,399 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,014 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:41:54] 2026-01-12 16:41:17,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,014 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:41:54] 2026-01-12 16:41:17,014 | INFO     | job 6966979455 has completed (purged errors)
[2026-01-12 17:41:54] 2026-01-12 16:41:17,014 | INFO     | overall cleanup function is called
[2026-01-12 17:41:54] 2026-01-12 16:41:18,023 | INFO     | --- collectZombieJob: --- 10, [10834]
[2026-01-12 17:41:54] 2026-01-12 16:41:18,023 | INFO     | zombie collector waiting for pid 10834
[2026-01-12 17:41:54] 2026-01-12 16:41:18,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:41:54] 2026-01-12 16:41:18,024 | INFO     | collected zombie processes
[2026-01-12 17:41:54] 2026-01-12 16:41:18,024 | INFO     | will attempt to kill all subprocesses of pid=10834
[2026-01-12 17:41:54] 2026-01-12 16:41:18,100 | INFO     | process IDs to be killed: [10834] (in reverse order)
[2026-01-12 17:41:54] 2026-01-12 16:41:18,950 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:41:54] 2026-01-12 16:41:18,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:41:54] 2026-01-12 16:41:18,952 | INFO     | did not find any defunct processes belonging to 10834
[2026-01-12 17:41:54] 2026-01-12 16:41:18,954 | INFO     | did not find any defunct processes belonging to 10834
[2026-01-12 17:41:54] 2026-01-12 16:41:18,954 | INFO     | ready for new job
[2026-01-12 17:41:54] 2026-01-12 16:41:18,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:41:54] 2026-01-12 16:41:18,956 | INFO     | ***************************************
[2026-01-12 17:41:54] 2026-01-12 16:41:18,956 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:41:54] 2026-01-12 16:41:18,956 | INFO     | ***************************************
[2026-01-12 17:41:54] 2026-01-12 16:41:18,957 | INFO     | 
[2026-01-12 17:41:54] 2026-01-12 16:41:18,957 | INFO     | pilot is running in a VM
[2026-01-12 17:41:54] 2026-01-12 16:41:18,957 | INFO     | architecture information:
[2026-01-12 17:41:54] 2026-01-12 16:41:18,971 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:41:54] 2026-01-12 16:41:19,230 | INFO     | cat /etc/os-release:
[2026-01-12 17:41:54] NAME="CentOS Linux"
[2026-01-12 17:41:54] VERSION="7 (Core)"
[2026-01-12 17:41:54] ID="centos"
[2026-01-12 17:41:54] ID_LIKE="rhel fedora"
[2026-01-12 17:41:54] VERSION_ID="7"
[2026-01-12 17:41:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:41:54] ANSI_COLOR="0;31"
[2026-01-12 17:41:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:41:54] HOME_URL="https://www.centos.org/"
[2026-01-12 17:41:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:41:54] 
[2026-01-12 17:41:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:41:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:41:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:41:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:41:54] 
[2026-01-12 17:41:54] 2026-01-12 16:41:19,231 | INFO     | ***************************************
[2026-01-12 17:41:54] 2026-01-12 16:41:19,742 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-12 17:41:54] 2026-01-12 16:41:20,023 | INFO     | sufficient remaining disk space (496395878400 B)
[2026-01-12 17:41:54] 2026-01-12 16:41:20,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:41:54] 2026-01-12 16:41:20,023 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:41:54] 2026-01-12 16:41:20,023 | INFO     | update_server=False
[2026-01-12 17:41:54] 2026-01-12 16:41:20,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:41:54] 2026-01-12 16:41:20,047 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 17:41:54] 2026-01-12 16:41:20,047 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 17:41:54] 2026-01-12 16:41:20,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:41:54] 2026-01-12 16:41:20,048 | INFO     | will abort loop
[2026-01-12 17:41:54] 2026-01-12 16:41:20,121 | INFO     | all data control threads have been joined
[2026-01-12 17:41:54] 2026-01-12 16:41:20,244 | INFO     | all payload control threads have been joined
[2026-01-12 17:41:54] 2026-01-12 16:41:20,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:41:54] 2026-01-12 16:41:21,029 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,053 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,127 | INFO     | [data] control thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,247 | INFO     | all job control threads have been joined
[2026-01-12 17:41:54] 2026-01-12 16:41:21,251 | INFO     | [payload] control thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,261 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,295 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:41:54] 2026-01-12 16:41:21,419 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,645 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,683 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:21,709 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,253 | INFO     | [job] control thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,418 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,433 | INFO     | [job] validate thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,452 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,552 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:22,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:41:54] 2026-01-12 16:41:26,656 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:41:54] 2026-01-12 16:41:33,644 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:41:54] 2026-01-12 16:41:34,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389115725632)>', '<ExcThread(monitor, started 140388429973248)>']
[2026-01-12 17:41:54] 2026-01-12 16:41:39,692 | INFO     | all workflow threads have been joined
[2026-01-12 17:41:54] 2026-01-12 16:41:39,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:41:54] 2026-01-12 16:41:39,693 | INFO     | traces error code: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:39,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:41:54] 2026-01-12 16:41:49,494 | INFO     | PID=4363 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-12 17:41:54] 2026-01-12 16:41:49,495 | INFO     | .. there are 2 such processes running
[2026-01-12 17:41:54] 2026-01-12 16:41:49,496 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:41:54] 2026-01-12 16:41:49,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:41:54] 2026-01-12 16:41:49,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:41:54] 2026-01-12 16:41:49,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:41:54] 2026-01-12 16:41:49,497 | INFO     | [monitor] control thread has ended
[2026-01-12 17:41:54] 2026-01-12 16:41:49,965 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:41:54] 2026-01-12 16:41:50,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:41:54] 2026-01-12 16:41:50,176 [wrapper] pilotpid: 4363
[2026-01-12 17:41:54] 2026-01-12 16:41:50,271 [wrapper] Pilot exit status: 0
[2026-01-12 17:41:54] 2026-01-12 16:41:50,689 [wrapper] pandaids: 6966979455
[2026-01-12 17:41:54] 2026-01-12 16:41:51,795 [wrapper] cleanup supervisor_pilot  2284 4364
[2026-01-12 17:41:54] 2026-01-12 16:41:51,888 [wrapper] Test setup, not cleaning
[2026-01-12 17:41:54] 2026-01-12 16:41:51,943 [wrapper] apfmon messages muted
[2026-01-12 17:41:54] 2026-01-12 16:41:52,041 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:41:54] 2026-01-12 16:41:52,143 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:41:54]  *** Error codes and diagnostics ***
[2026-01-12 17:41:54]     "exeErrorCode": 0,
[2026-01-12 17:41:54]     "exeErrorDiag": "",
[2026-01-12 17:41:54]     "pilotErrorCode": 0,
[2026-01-12 17:41:54]     "pilotErrorDiag": "",
[2026-01-12 17:41:54]  *** Listing of results directory ***
[2026-01-12 17:41:54] total 481524
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc    579449 Jan 12 13:21 pilot3.tar.gz
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc      5112 Jan 12 13:47 queuedata.json
[2026-01-12 17:41:54] -rwx------. 1 boinc boinc     36322 Jan 12 13:49 runpilot2-wrapper.sh
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc       100 Jan 12 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:41:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 13:51 run_atlas
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc       105 Jan 12 13:51 job.xml
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc      6390 Jan 12 13:51 init_data.xml
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc 286943271 Jan 12 13:51 EVNT.48188454._000009.pool.root.1
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc     15847 Jan 12 13:51 start_atlas.sh
[2026-01-12 17:41:54] drwxrwx--x. 2 boinc boinc        68 Jan 12 13:51 shared
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc    592406 Jan 12 13:51 input.tar.gz
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc         0 Jan 12 13:51 boinc_lockfile
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc      2620 Jan 12 13:52 pandaJob.out
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc    987696 Jan 12 13:56 agis_schedconf.cvmfs.json
[2026-01-12 17:41:54] drwx------. 5 boinc boinc      4096 Jan 12 13:56 pilot3
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc 197671532 Jan 12 17:37 HITS.48188456._000216.pool.root.1
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc       531 Jan 12 17:38 boinc_task_state.xml
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc      1011 Jan 12 17:39 memory_monitor_summary.json
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc   1516240 Jan 12 17:39 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc    476339 Jan 12 17:39 log.48188456._000216.job.log.tgz.1
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc      7769 Jan 12 17:41 heartbeat.json
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc        95 Jan 12 17:41 pilot_heartbeat.json
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc       819 Jan 12 17:41 pilotlog.txt
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc   1807093 Jan 12 17:41 log.48188456._000216.job.log.1
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc        28 Jan 12 17:41 wrapper_checkpoint.txt
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc      8192 Jan 12 17:41 boinc_mmap_file
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc       357 Jan 12 17:41 output.list
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc       620 Jan 12 17:41 runtime_log
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc   2304000 Jan 12 17:41 result.tar.gz
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc      8817 Jan 12 17:41 runtime_log.err
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc       657 Jan 12 17:41 MExMDmZXWz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSvhKDmlEg1Dm.diag
[2026-01-12 17:41:54] -rw-r--r--. 1 boinc boinc     20772 Jan 12 17:41 stderr.txt
[2026-01-12 17:41:54] HITS file was successfully produced:
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc 197671532 Jan 12 17:37 shared/HITS.pool.root.1
[2026-01-12 17:41:54]  *** Contents of shared directory: ***
[2026-01-12 17:41:54] total 476108
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc 286943271 Jan 12 13:51 ATLAS.root_0
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc     15847 Jan 12 13:51 start_atlas.sh
[2026-01-12 17:41:54] -rw-r--r--. 2 boinc boinc    592406 Jan 12 13:51 input.tar.gz
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc 197671532 Jan 12 17:37 HITS.pool.root.1
[2026-01-12 17:41:54] -rw-------. 1 boinc boinc   2304000 Jan 12 17:41 result.tar.gz
17:41:56 (32725): run_atlas exited; CPU time 47348.484749
17:41:56 (32725): called boinc_finish(0)

</stderr_txt>
]]>

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