Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:20 (3804493): wrapper (7.7.26015): starting
07:39:20 (3804493): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 07:39:20] Arguments: --nthreads 8
[2026-01-12 07:39:20] Threads: 8
[2026-01-12 07:39:20] Checking for CVMFS
[2026-01-12 07:39:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 07:39:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 07:39:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 07:39:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 07:39:22] 2.13.3.0 12210 26609 155204 155051 3 395 40369127 40960001 32261 16776704 0 99587826 99.786 52916288 47082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 07:39:22] CVMFS is ok
[2026-01-12 07:39:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 07:39:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 07:39:22] Further information can be found at the LHC@home message board.
[2026-01-12 07:39:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 07:39:22] Checking for apptainer binary...
[2026-01-12 07:39:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 07:39:22] Running /usr/bin/apptainer --version
[2026-01-12 07:39:22] apptainer version 1.4.5-2.el9
[2026-01-12 07:39:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 07:39:22] c-208-37.aglt2.org
[2026-01-12 07:39:22] apptainer works
[2026-01-12 07:39:22] Set ATHENA_PROC_NUMBER=8
[2026-01-12 07:39:22] Set ATHENA_CORE_NUMBER=8
[2026-01-12 07:39:23] Starting ATLAS job with PandaID=6966967225
[2026-01-12 07:39:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 08:59:35]  *** The last 200 lines of the pilot log: ***
[2026-01-12 08:59:35] 2026-01-12 13:58:33,656 | INFO     | executing command: lscpu
[2026-01-12 08:59:35] 2026-01-12 13:58:33,796 | INFO     | time since job start (4702s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:33,859 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 08:59:35] 2026-01-12 13:58:34,305 | INFO     | monitor loop #312: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:34,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:35,803 | INFO     | time since job start (4704s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:36,809 | INFO     | monitor loop #313: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:36,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:37,810 | INFO     | time since job start (4706s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:39,351 | INFO     | monitor loop #314: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:39,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:41,509 | INFO     | PID=3814088 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 08:59:35] 2026-01-12 13:58:41,510 | INFO     | .. there are 28 such processes running
[2026-01-12 08:59:35] 2026-01-12 13:58:41,904 | INFO     | monitor loop #315: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:41,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:42,510 | INFO     | time since job start (4711s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:44,409 | INFO     | monitor loop #316: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:44,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:44,522 | INFO     | time since job start (4713s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:46,529 | INFO     | time since job start (4715s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:46,926 | INFO     | monitor loop #317: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:46,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:48,538 | INFO     | time since job start (4717s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:49,433 | INFO     | monitor loop #318: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:49,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:50,544 | INFO     | time since job start (4719s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:51,942 | INFO     | monitor loop #319: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:51,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:52,551 | INFO     | time since job start (4721s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:54,447 | INFO     | monitor loop #320: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:54,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:54,558 | INFO     | time since job start (4723s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:56,565 | INFO     | time since job start (4725s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:56,953 | INFO     | monitor loop #321: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:56,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:58,571 | INFO     | time since job start (4727s) is within the limit (349056.0s)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,459 | INFO     | monitor loop #322: job 0:6966967225 is in state 'finished'
[2026-01-12 08:59:35] 2026-01-12 13:58:59,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,804 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 08:59:35] 2026-01-12 13:58:59,813 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3780.7948593749984
[2026-01-12 08:59:35] 2026-01-12 13:58:59,838 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6966967225/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,839 | INFO     | extracted standard info from prmon json
[2026-01-12 08:59:35] 2026-01-12 13:58:59,839 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 08:59:35] 2026-01-12 13:58:59,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 08:59:35] 2026-01-12 13:58:59,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 08:59:35] 2026-01-12 13:58:59,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | fitting pss+swap vs Time
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | sum of square deviations: 101847552.9855073
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | sum of deviations: -3170800981.5507255
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | mean x: 1768224098.0144928
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | mean y: 2602266.5507246377
[2026-01-12 08:59:35] 2026-01-12 13:58:59,845 | INFO     | intersect: 55052395229.0171
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | chi2: 0.010887715570801015
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | current memory leak: -31.13 B/s (using 69 data points, chi2=0.01)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | could have reported an average CPU frequency of 3783 MHz (6 samples)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | ..............................
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | . Timing measurements:
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | . get job = 0 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,846 | INFO     | . initial setup = 4 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | . payload setup = 29 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | . stage-in = 0 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | . payload execution = 4612 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | . stage-out = 2 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | . log creation = 0 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,848 | INFO     | ..............................
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | 
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | job summary report
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | --------------------------------------------------
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | PanDA job id: 6966967225
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | task id: 48188640
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | errors: (none)
[2026-01-12 08:59:35] 2026-01-12 13:58:59,924 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | pilot state: finished 
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | transexitcode: 0
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | exeerrorcode: 0
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | exeerrordiag: 
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | exitcode: 0
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | exitmsg: OK
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | cpuconsumptiontime: 23000 s
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | nevents: 400
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | neventsw: 0
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | pid: 3836377
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | pgrp: 3836377
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | corecount: 8
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | event service: False
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | sizes: {0: 2284140, 1: 2284140, 11: 2284168, 22: 2284196, 26: 2284486, 33: 2284514, 4645: 2311008, 4648: 2320062, 4674: 2320200}
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | --------------------------------------------------
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | 
[2026-01-12 08:59:35] 2026-01-12 13:58:59,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | job 6966967225 has completed (purged errors)
[2026-01-12 08:59:35] 2026-01-12 13:59:00,027 | INFO     | overall cleanup function is called
[2026-01-12 08:59:35] 2026-01-12 13:59:01,036 | INFO     | --- collectZombieJob: --- 10, [3836377]
[2026-01-12 08:59:35] 2026-01-12 13:59:01,036 | INFO     | zombie collector waiting for pid 3836377
[2026-01-12 08:59:35] 2026-01-12 13:59:01,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 08:59:35] 2026-01-12 13:59:01,036 | INFO     | collected zombie processes
[2026-01-12 08:59:35] 2026-01-12 13:59:01,036 | INFO     | will attempt to kill all subprocesses of pid=3836377
[2026-01-12 08:59:35] 2026-01-12 13:59:02,543 | INFO     | process IDs to be killed: [3836377] (in reverse order)
[2026-01-12 08:59:35] 2026-01-12 13:59:02,996 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 08:59:35] 2026-01-12 13:59:02,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 08:59:35] 2026-01-12 13:59:03,088 | INFO     | did not find any defunct processes belonging to 3836377
[2026-01-12 08:59:35] 2026-01-12 13:59:03,165 | INFO     | did not find any defunct processes belonging to 3836377
[2026-01-12 08:59:35] 2026-01-12 13:59:03,165 | INFO     | ready for new job
[2026-01-12 08:59:35] 2026-01-12 13:59:03,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 08:59:35] 2026-01-12 13:59:03,170 | INFO     | ***************************************
[2026-01-12 08:59:35] 2026-01-12 13:59:03,171 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 08:59:35] 2026-01-12 13:59:03,171 | INFO     | ***************************************
[2026-01-12 08:59:35] 2026-01-12 13:59:03,171 | INFO     | 
[2026-01-12 08:59:35] 2026-01-12 13:59:03,179 | INFO     | architecture information:
[2026-01-12 08:59:35] 2026-01-12 13:59:03,185 | INFO     | executing command: cat /etc/os-release
[2026-01-12 08:59:35] 2026-01-12 13:59:03,219 | INFO     | cat /etc/os-release:
[2026-01-12 08:59:35] NAME="CentOS Linux"
[2026-01-12 08:59:35] VERSION="7 (Core)"
[2026-01-12 08:59:35] ID="centos"
[2026-01-12 08:59:35] ID_LIKE="rhel fedora"
[2026-01-12 08:59:35] VERSION_ID="7"
[2026-01-12 08:59:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 08:59:35] ANSI_COLOR="0;31"
[2026-01-12 08:59:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 08:59:35] HOME_URL="https://www.centos.org/"
[2026-01-12 08:59:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 08:59:35] 
[2026-01-12 08:59:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 08:59:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 08:59:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 08:59:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 08:59:35] 
[2026-01-12 08:59:35] 2026-01-12 13:59:03,220 | INFO     | ***************************************
[2026-01-12 08:59:35] 2026-01-12 13:59:03,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-12 08:59:35] 2026-01-12 13:59:03,762 | INFO     | sufficient remaining disk space (166441517056 B)
[2026-01-12 08:59:35] 2026-01-12 13:59:03,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 08:59:35] 2026-01-12 13:59:03,763 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 08:59:35] 2026-01-12 13:59:03,763 | INFO     | update_server=False
[2026-01-12 08:59:35] 2026-01-12 13:59:03,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 08:59:35] 2026-01-12 13:59:03,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 08:59:35] 2026-01-12 13:59:03,768 | INFO     | aborting loop
[2026-01-12 08:59:35] 2026-01-12 13:59:03,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 08:59:35] 2026-01-12 13:59:04,147 | INFO     | all data control threads have been joined
[2026-01-12 08:59:35] 2026-01-12 13:59:04,182 | INFO     | all payload control threads have been joined
[2026-01-12 08:59:35] 2026-01-12 13:59:04,286 | INFO     | all job control threads have been joined
[2026-01-12 08:59:35] 2026-01-12 13:59:04,770 | INFO     | [job] retrieve thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:04,774 | INFO     | [job] job monitor thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:04,985 | INFO     | [payload] failed_post thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:04,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 08:59:35] 2026-01-12 13:59:05,153 | INFO     | [data] control thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,188 | INFO     | [payload] control thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,292 | INFO     | [job] control thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,543 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,557 | INFO     | [job] validate thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,890 | INFO     | [data] copytool_in thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,894 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,894 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:05,995 | INFO     | [job] queue monitor thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:06,014 | INFO     | [data] copytool_out thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:06,165 | INFO     | [payload] validate_post thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:06,246 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:06,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 08:59:35] 2026-01-12 13:59:10,789 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 08:59:35] 2026-01-12 13:59:18,858 | INFO     | [monitor] cgroup control has ended
[2026-01-12 08:59:35] 2026-01-12 13:59:20,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069358331712)>', '<ExcThread(monitor, started 140068966602496)>']
[2026-01-12 08:59:35] 2026-01-12 13:59:25,413 | INFO     | all workflow threads have been joined
[2026-01-12 08:59:35] 2026-01-12 13:59:25,413 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 08:59:35] 2026-01-12 13:59:25,413 | INFO     | traces error code: 0
[2026-01-12 08:59:35] 2026-01-12 13:59:25,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 08:59:35] 2026-01-12 13:59:33,545 | INFO     | PID=3814088 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 08:59:35] 2026-01-12 13:59:33,545 | INFO     | .. there are 28 such processes running
[2026-01-12 08:59:35] 2026-01-12 13:59:33,546 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 08:59:35] 2026-01-12 13:59:33,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 08:59:35] 2026-01-12 13:59:33,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 08:59:35] 2026-01-12 13:59:33,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 08:59:35] 2026-01-12 13:59:33,546 | INFO     | [monitor] control thread has ended
[2026-01-12 08:59:35] 2026-01-12 13:59:34,020 [wrapper] ==== pilot stdout END ====
[2026-01-12 08:59:35] 2026-01-12 13:59:34,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 08:59:35] 2026-01-12 13:59:34,067 [wrapper] pilotpid: 3814088
[2026-01-12 08:59:35] 2026-01-12 13:59:34,110 [wrapper] Pilot exit status: 0
[2026-01-12 08:59:35] 2026-01-12 13:59:34,344 [wrapper] pandaids: 6966967225
[2026-01-12 08:59:35] 2026-01-12 13:59:34,586 [wrapper] cleanup supervisor_pilot   87501 3814089
[2026-01-12 08:59:35] 2026-01-12 13:59:34,592 [wrapper] Test setup, not cleaning
[2026-01-12 08:59:35] 2026-01-12 13:59:34,594 [wrapper] apfmon messages muted
[2026-01-12 08:59:35] 2026-01-12 13:59:34,603 [wrapper] ==== wrapper stdout END ====
[2026-01-12 08:59:35] 2026-01-12 13:59:34,605 [wrapper] ==== wrapper stderr END ====
[2026-01-12 08:59:35]  *** Error codes and diagnostics ***
[2026-01-12 08:59:35]     "exeErrorCode": 0,
[2026-01-12 08:59:35]     "exeErrorDiag": "",
[2026-01-12 08:59:35]     "pilotErrorCode": 0,
[2026-01-12 08:59:35]     "pilotErrorDiag": "",
[2026-01-12 08:59:35]  *** Listing of results directory ***
[2026-01-12 08:59:35] total 495488
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:21 pilot3.tar.gz
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:26 queuedata.json
[2026-01-12 08:59:35] -rwx------. 1 boincer umatlas     36322 Jan 12 07:26 runpilot2-wrapper.sh
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas       100 Jan 12 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 08:59:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 07:39 run_atlas
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas       105 Jan 12 07:39 job.xml
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas 292803689 Jan 12 07:39 EVNT.48188638._000008.pool.root.1
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:39 start_atlas.sh
[2026-01-12 08:59:35] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 07:39 shared
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas    592423 Jan 12 07:39 input.tar.gz
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas         0 Jan 12 07:39 boinc_lockfile
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas      2649 Jan 12 07:39 pandaJob.out
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas        57 Jan 12 07:39 setup.sh.local
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas    987696 Jan 12 07:40 agis_schedconf.cvmfs.json
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas   1516240 Jan 12 07:40 agis_ddmendpoints.agis.ALL.json
[2026-01-12 08:59:35] drwx------. 5 boincer umatlas      4096 Jan 12 07:40 pilot3
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas      7184 Jan 12 08:54 init_data.xml
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas 208693210 Jan 12 08:57 HITS.48188640._000178.pool.root.1
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas       530 Jan 12 08:57 boinc_task_state.xml
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas      1033 Jan 12 08:58 memory_monitor_summary.json
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas    334762 Jan 12 08:58 log.48188640._000178.job.log.tgz.1
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas      7767 Jan 12 08:58 heartbeat.json
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 08:59 boinc_mmap_file
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas        27 Jan 12 08:59 wrapper_checkpoint.txt
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas        95 Jan 12 08:59 pilot_heartbeat.json
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas       823 Jan 12 08:59 pilotlog.txt
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas    652087 Jan 12 08:59 log.48188640._000178.job.log.1
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas       357 Jan 12 08:59 output.list
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas       620 Jan 12 08:59 runtime_log
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas   1003520 Jan 12 08:59 result.tar.gz
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas      9342 Jan 12 08:59 runtime_log.err
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas       652 Jan 12 08:59 8pkNDmSBWz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtuhKDmdGhPDn.diag
[2026-01-12 08:59:35] -rw-r--r--. 1 boincer umatlas     22473 Jan 12 08:59 stderr.txt
[2026-01-12 08:59:35] HITS file was successfully produced:
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas 208693210 Jan 12 08:57 shared/HITS.pool.root.1
[2026-01-12 08:59:35]  *** Contents of shared directory: ***
[2026-01-12 08:59:35] total 491328
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas 292803689 Jan 12 07:39 ATLAS.root_0
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:39 start_atlas.sh
[2026-01-12 08:59:35] -rw-r--r--. 2 boincer umatlas    592423 Jan 12 07:39 input.tar.gz
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas 208693210 Jan 12 08:57 HITS.pool.root.1
[2026-01-12 08:59:35] -rw-------. 1 boincer umatlas   1003520 Jan 12 08:59 result.tar.gz
08:59:37 (3804493): run_atlas exited; CPU time 23170.895192
08:59:37 (3804493): called boinc_finish(0)

</stderr_txt>
]]>

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