Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:38 (3792913): wrapper (7.7.26015): starting
07:38:38 (3792913): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 07:38:38] Arguments: --nthreads 8
[2026-01-12 07:38:38] Threads: 8
[2026-01-12 07:38:38] Checking for CVMFS
[2026-01-12 07:38:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 07:38:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 07:38:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 07:38:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 07:38:39] 2.13.3.0 12210 26608 154568 155051 0 395 40369127 40960001 32257 16776704 0 99568200 99.786 52916287 47082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 07:38:39] CVMFS is ok
[2026-01-12 07:38:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 07:38:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 07:38:39] Further information can be found at the LHC@home message board.
[2026-01-12 07:38:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 07:38:39] Checking for apptainer binary...
[2026-01-12 07:38:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 07:38:39] Running /usr/bin/apptainer --version
[2026-01-12 07:38:40] apptainer version 1.4.5-2.el9
[2026-01-12 07:38:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 07:38:40] c-208-37.aglt2.org
[2026-01-12 07:38:40] apptainer works
[2026-01-12 07:38:40] Set ATHENA_PROC_NUMBER=8
[2026-01-12 07:38:40] Set ATHENA_CORE_NUMBER=8
[2026-01-12 07:38:40] Starting ATLAS job with PandaID=6966973589
[2026-01-12 07:38:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 09:22:56]  *** The last 200 lines of the pilot log: ***
[2026-01-12 09:22:56] 2026-01-12 14:21:51,815 | INFO     | monitor loop #411: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:21:51,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:21:51,900 | INFO     | time since job start (6133s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:21:54,270 | INFO     | PID=3806684 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 09:22:56] 2026-01-12 14:21:54,270 | INFO     | .. there are 27 such processes running
[2026-01-12 09:22:56] 2026-01-12 14:21:54,324 | INFO     | monitor loop #412: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:21:54,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:21:55,271 | INFO     | time since job start (6137s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:21:56,829 | INFO     | monitor loop #413: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:21:56,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:21:57,278 | INFO     | time since job start (6139s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:21:59,285 | INFO     | time since job start (6141s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:21:59,339 | INFO     | monitor loop #414: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:21:59,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:01,292 | INFO     | time since job start (6143s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:01,867 | INFO     | monitor loop #415: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:01,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:03,303 | INFO     | time since job start (6145s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:04,372 | INFO     | monitor loop #416: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:04,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:05,310 | INFO     | time since job start (6147s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:06,880 | INFO     | monitor loop #417: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:06,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:07,317 | INFO     | time since job start (6149s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:09,326 | INFO     | time since job start (6151s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:09,394 | INFO     | monitor loop #418: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:09,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:11,333 | INFO     | time since job start (6153s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:11,902 | INFO     | monitor loop #419: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:11,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:13,345 | INFO     | time since job start (6155s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:14,409 | INFO     | monitor loop #420: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:14,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:15,352 | INFO     | time since job start (6157s) is within the limit (349056.0s)
[2026-01-12 09:22:56] 2026-01-12 14:22:16,975 | INFO     | monitor loop #421: job 0:6966973589 is in state 'finished'
[2026-01-12 09:22:56] 2026-01-12 14:22:16,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 09:22:56] 2026-01-12 14:22:17,840 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 09:22:56] 2026-01-12 14:22:17,855 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.633015624999
[2026-01-12 09:22:56] 2026-01-12 14:22:17,869 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6966973589/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 09:22:56] 2026-01-12 14:22:17,869 | INFO     | extracted standard info from prmon json
[2026-01-12 09:22:56] 2026-01-12 14:22:17,869 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 09:22:56] 2026-01-12 14:22:17,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 09:22:56] 2026-01-12 14:22:17,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 09:22:56] 2026-01-12 14:22:17,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | fitting pss+swap vs Time
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | sum of square deviations: 241486405.86956495
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | sum of deviations: -379864194.6086954
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | mean x: 1768224758.847826
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | mean y: 2543735.9565217393
[2026-01-12 09:22:56] 2026-01-12 14:22:17,871 | INFO     | intersect: 2784005787.5706577
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | chi2: 0.011210423682639182
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | current memory leak: -1.57 B/s (using 92 data points, chi2=0.01)
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | could have reported an average CPU frequency of 3793 MHz (7 samples)
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | ..............................
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . Timing measurements:
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . get job = 0 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . initial setup = 4 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . payload setup = 34 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . stage-in = 0 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . payload execution = 6037 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . stage-out = 1 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | . log creation = 0 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,872 | INFO     | ..............................
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | 
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | job summary report
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | --------------------------------------------------
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | PanDA job id: 6966973589
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | task id: 47898826
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | errors: (none)
[2026-01-12 09:22:56] 2026-01-12 14:22:17,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | pilot state: finished 
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | transexitcode: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | exeerrorcode: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | exeerrordiag: 
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | exitcode: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | exitmsg: OK
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | cpuconsumptiontime: 31034 s
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | nevents: 400
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | neventsw: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | pid: 3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | pgrp: 3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | corecount: 8
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | event service: False
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | sizes: {0: 2283918, 11: 2283918, 20: 2284208, 22: 2284236, 6075: 2311199, 6076: 2311198, 6079: 2320436, 6117: 2320574}
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | --------------------------------------------------
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | 
[2026-01-12 09:22:56] 2026-01-12 14:22:17,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | job 6966973589 has completed (purged errors)
[2026-01-12 09:22:56] 2026-01-12 14:22:18,184 | INFO     | overall cleanup function is called
[2026-01-12 09:22:56] 2026-01-12 14:22:18,223 | INFO     | PID=3806684 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 09:22:56] 2026-01-12 14:22:18,224 | INFO     | .. there are 27 such processes running
[2026-01-12 09:22:56] 2026-01-12 14:22:19,198 | INFO     | --- collectZombieJob: --- 10, [3824312]
[2026-01-12 09:22:56] 2026-01-12 14:22:19,198 | INFO     | zombie collector waiting for pid 3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:19,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 09:22:56] 2026-01-12 14:22:19,198 | INFO     | collected zombie processes
[2026-01-12 09:22:56] 2026-01-12 14:22:19,198 | INFO     | will attempt to kill all subprocesses of pid=3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:20,221 | INFO     | process IDs to be killed: [3824312] (in reverse order)
[2026-01-12 09:22:56] 2026-01-12 14:22:20,646 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 09:22:56] 2026-01-12 14:22:20,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 09:22:56] 2026-01-12 14:22:20,695 | INFO     | did not find any defunct processes belonging to 3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:20,739 | INFO     | did not find any defunct processes belonging to 3824312
[2026-01-12 09:22:56] 2026-01-12 14:22:20,739 | INFO     | ready for new job
[2026-01-12 09:22:56] 2026-01-12 14:22:20,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 09:22:56] 2026-01-12 14:22:20,744 | INFO     | ***************************************
[2026-01-12 09:22:56] 2026-01-12 14:22:20,744 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 09:22:56] 2026-01-12 14:22:20,744 | INFO     | ***************************************
[2026-01-12 09:22:56] 2026-01-12 14:22:20,744 | INFO     | 
[2026-01-12 09:22:56] 2026-01-12 14:22:20,753 | INFO     | architecture information:
[2026-01-12 09:22:56] 2026-01-12 14:22:20,757 | INFO     | executing command: cat /etc/os-release
[2026-01-12 09:22:56] 2026-01-12 14:22:20,826 | INFO     | cat /etc/os-release:
[2026-01-12 09:22:56] NAME="CentOS Linux"
[2026-01-12 09:22:56] VERSION="7 (Core)"
[2026-01-12 09:22:56] ID="centos"
[2026-01-12 09:22:56] ID_LIKE="rhel fedora"
[2026-01-12 09:22:56] VERSION_ID="7"
[2026-01-12 09:22:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 09:22:56] ANSI_COLOR="0;31"
[2026-01-12 09:22:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 09:22:56] HOME_URL="https://www.centos.org/"
[2026-01-12 09:22:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 09:22:56] 
[2026-01-12 09:22:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 09:22:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 09:22:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 09:22:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 09:22:56] 
[2026-01-12 09:22:56] 2026-01-12 14:22:20,827 | INFO     | ***************************************
[2026-01-12 09:22:56] 2026-01-12 14:22:21,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-12 09:22:56] 2026-01-12 14:22:21,366 | INFO     | sufficient remaining disk space (166966853632 B)
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | INFO     | update_server=False
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 09:22:56] 2026-01-12 14:22:21,367 | INFO     | aborting loop
[2026-01-12 09:22:56] 2026-01-12 14:22:21,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 09:22:56] 2026-01-12 14:22:21,877 | INFO     | all data control threads have been joined
[2026-01-12 09:22:56] 2026-01-12 14:22:22,372 | INFO     | [job] retrieve thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,372 | INFO     | [job] job monitor thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 09:22:56] 2026-01-12 14:22:22,443 | INFO     | [payload] validate_post thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,443 | INFO     | [payload] failed_post thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,479 | INFO     | all payload control threads have been joined
[2026-01-12 09:22:56] 2026-01-12 14:22:22,541 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,638 | INFO     | [data] copytool_in thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,638 | INFO     | [job] validate thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,639 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:22,793 | INFO     | all job control threads have been joined
[2026-01-12 09:22:56] 2026-01-12 14:22:22,884 | INFO     | [data] control thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:23,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 09:22:56] 2026-01-12 14:22:23,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:23,485 | INFO     | [payload] control thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:23,799 | INFO     | [job] control thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:23,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:24,014 | INFO     | [job] queue monitor thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:24,450 | INFO     | [data] copytool_out thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:25,624 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 09:22:56] 2026-01-12 14:22:48,264 | INFO     | [monitor] cgroup control has ended
[2026-01-12 09:22:56] 2026-01-12 14:22:49,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234291672896)>', '<ExcThread(monitor, started 140233928582912)>']
[2026-01-12 09:22:56] 2026-01-12 14:22:51,701 | INFO     | PID=3806684 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 09:22:56] 2026-01-12 14:22:51,701 | INFO     | .. there are 27 such processes running
[2026-01-12 09:22:56] 2026-01-12 14:22:51,702 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 09:22:56] 2026-01-12 14:22:51,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 09:22:56] 2026-01-12 14:22:51,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 09:22:56] 2026-01-12 14:22:51,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 09:22:56] 2026-01-12 14:22:51,702 | INFO     | [monitor] control thread has ended
[2026-01-12 09:22:56] 2026-01-12 14:22:54,798 | INFO     | all workflow threads have been joined
[2026-01-12 09:22:56] 2026-01-12 14:22:54,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 09:22:56] 2026-01-12 14:22:54,798 | INFO     | traces error code: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:54,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 09:22:56] 2026-01-12 14:22:55,317 [wrapper] ==== pilot stdout END ====
[2026-01-12 09:22:56] 2026-01-12 14:22:55,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 09:22:56] 2026-01-12 14:22:55,372 [wrapper] pilotpid: 3806684
[2026-01-12 09:22:56] 2026-01-12 14:22:55,397 [wrapper] Pilot exit status: 0
[2026-01-12 09:22:56] 2026-01-12 14:22:55,500 [wrapper] pandaids: 6966973589
[2026-01-12 09:22:56] 2026-01-12 14:22:55,856 [wrapper] cleanup supervisor_pilot  156869 3806685
[2026-01-12 09:22:56] 2026-01-12 14:22:55,881 [wrapper] Test setup, not cleaning
[2026-01-12 09:22:56] 2026-01-12 14:22:55,924 [wrapper] apfmon messages muted
[2026-01-12 09:22:56] 2026-01-12 14:22:55,957 [wrapper] ==== wrapper stdout END ====
[2026-01-12 09:22:56] 2026-01-12 14:22:55,983 [wrapper] ==== wrapper stderr END ====
[2026-01-12 09:22:56]  *** Error codes and diagnostics ***
[2026-01-12 09:22:56]     "exeErrorCode": 0,
[2026-01-12 09:22:56]     "exeErrorDiag": "",
[2026-01-12 09:22:56]     "pilotErrorCode": 0,
[2026-01-12 09:22:56]     "pilotErrorDiag": "",
[2026-01-12 09:22:56]  *** Listing of results directory ***
[2026-01-12 09:22:56] total 438172
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:21 pilot3.tar.gz
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:26 queuedata.json
[2026-01-12 09:22:56] -rwx------. 1 boincer umatlas     36322 Jan 12 07:29 runpilot2-wrapper.sh
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas       100 Jan 12 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 09:22:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 07:38 run_atlas
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas       105 Jan 12 07:38 job.xml
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas 224196773 Jan 12 07:38 EVNT.47898824._001232.pool.root.1
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:38 start_atlas.sh
[2026-01-12 09:22:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 07:38 shared
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 07:38 input.tar.gz
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas         0 Jan 12 07:38 boinc_lockfile
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas      2517 Jan 12 07:38 pandaJob.out
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas        57 Jan 12 07:38 setup.sh.local
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas    987696 Jan 12 07:39 agis_schedconf.cvmfs.json
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas   1516240 Jan 12 07:39 agis_ddmendpoints.agis.ALL.json
[2026-01-12 09:22:56] drwx------. 5 boincer umatlas      4096 Jan 12 07:39 pilot3
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas      7184 Jan 12 09:19 init_data.xml
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas 218217234 Jan 12 09:20 HITS.47898826._040883.pool.root.1
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas       529 Jan 12 09:21 boinc_task_state.xml
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas      1035 Jan 12 09:21 memory_monitor_summary.json
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas    336484 Jan 12 09:21 log.47898826._040883.job.log.tgz.1
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas      7778 Jan 12 09:22 heartbeat.json
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas        95 Jan 12 09:22 pilot_heartbeat.json
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 09:22 boinc_mmap_file
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas        27 Jan 12 09:22 wrapper_checkpoint.txt
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas      4825 Jan 12 09:22 pilotlog.txt
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas    839015 Jan 12 09:22 log.47898826._040883.job.log.1
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas       357 Jan 12 09:22 output.list
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas       620 Jan 12 09:22 runtime_log
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas   1198080 Jan 12 09:22 result.tar.gz
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas      9342 Jan 12 09:22 runtime_log.err
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas       654 Jan 12 09:22 MnpNDmxDWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTcnKDmj08uMo.diag
[2026-01-12 09:22:56] -rw-r--r--. 1 boincer umatlas     22476 Jan 12 09:22 stderr.txt
[2026-01-12 09:22:56] HITS file was successfully produced:
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas 218217234 Jan 12 09:20 shared/HITS.pool.root.1
[2026-01-12 09:22:56]  *** Contents of shared directory: ***
[2026-01-12 09:22:56] total 433824
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas 224196773 Jan 12 07:38 ATLAS.root_0
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:38 start_atlas.sh
[2026-01-12 09:22:56] -rw-r--r--. 2 boincer umatlas    592405 Jan 12 07:38 input.tar.gz
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas 218217234 Jan 12 09:20 HITS.pool.root.1
[2026-01-12 09:22:56] -rw-------. 1 boincer umatlas   1198080 Jan 12 09:22 result.tar.gz
09:22:58 (3792913): run_atlas exited; CPU time 31254.673007
09:22:58 (3792913): called boinc_finish(0)

</stderr_txt>
]]>

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