Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:07 (1044967): wrapper (7.7.26015): starting
07:56:07 (1044967): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 07:56:07] Arguments: --nthreads 8
[2026-01-12 07:56:07] Threads: 8
[2026-01-12 07:56:07] Checking for CVMFS
[2026-01-12 07:56:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 07:56:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 07:56:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 07:56:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 07:56:08] 2.13.3.0 11285 97712 172480 155053 2 366 26182547 32935937 21202 16776704 0 542358122 99.542 696168647 37216 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 07:56:08] CVMFS is ok
[2026-01-12 07:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 07:56:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 07:56:08] Further information can be found at the LHC@home message board.
[2026-01-12 07:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 07:56:08] Checking for apptainer binary...
[2026-01-12 07:56:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 07:56:08] Running /usr/bin/apptainer --version
[2026-01-12 07:56:08] apptainer version 1.4.5-2.el9
[2026-01-12 07:56:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 07:56:08] c7-3-29.aglt2.org
[2026-01-12 07:56:08] apptainer works
[2026-01-12 07:56:08] Set ATHENA_PROC_NUMBER=8
[2026-01-12 07:56:08] Set ATHENA_CORE_NUMBER=8
[2026-01-12 07:56:08] Starting ATLAS job with PandaID=6966967238
[2026-01-12 07:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 11:14:52]  *** The last 200 lines of the pilot log: ***
[2026-01-12 11:14:52] 2026-01-12 16:13:44,620 | INFO     | monitor loop #761: job 0:6966967238 is in state 'finished'
[2026-01-12 11:14:52] 2026-01-12 16:13:44,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:14:52] 2026-01-12 16:13:45,104 | INFO     | time since job start (11840s) is within the limit (349056.0s)
[2026-01-12 11:14:52] 2026-01-12 16:13:47,110 | INFO     | time since job start (11842s) is within the limit (349056.0s)
[2026-01-12 11:14:52] 2026-01-12 16:13:47,125 | INFO     | monitor loop #762: job 0:6966967238 is in state 'finished'
[2026-01-12 11:14:52] 2026-01-12 16:13:47,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:14:52] 2026-01-12 16:13:49,119 | INFO     | time since job start (11844s) is within the limit (349056.0s)
[2026-01-12 11:14:52] 2026-01-12 16:13:49,630 | INFO     | monitor loop #763: job 0:6966967238 is in state 'finished'
[2026-01-12 11:14:52] 2026-01-12 16:13:49,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,247 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 11:14:52] 2026-01-12 16:13:50,253 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3193.7169166666667
[2026-01-12 11:14:52] 2026-01-12 16:13:50,269 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6966967238/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,269 | INFO     | extracted standard info from prmon json
[2026-01-12 11:14:52] 2026-01-12 16:13:50,270 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 11:14:52] 2026-01-12 16:13:50,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 11:14:52] 2026-01-12 16:13:50,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 11:14:52] 2026-01-12 16:13:50,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 11:14:52] 2026-01-12 16:13:50,273 | INFO     | fitting pss+swap vs Time
[2026-01-12 11:14:52] 2026-01-12 16:13:50,274 | INFO     | sum of square deviations: 2263984170.314433
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | sum of deviations: 31546938746.412384
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | mean x: 1768228508.530928
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | mean y: 2518801.597938144
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | intersect: -24636432821.698086
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | chi2: 2.9671874394520033
[2026-01-12 11:14:52] 2026-01-12 16:13:50,275 | INFO     | sum of square deviations: 2093406057.8095198
[2026-01-12 11:14:52] 2026-01-12 16:13:50,276 | INFO     | sum of deviations: 42932460870.66667
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | mean x: 1768228356.0317461
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | mean y: 2528747.888888889
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | intersect: -36261049654.655174
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | chi2: 2.2876020479687633
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | current chi2=2.2876020479687633 (change=22.903352260373193 %)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | right removable region: 188
[2026-01-12 11:14:52] 2026-01-12 16:13:50,277 | INFO     | sum of square deviations: 2093402397.8095198
[2026-01-12 11:14:52] 2026-01-12 16:13:50,278 | INFO     | sum of deviations: -11461166594.36508
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | mean x: 1768228661.0317461
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | mean y: 2556989.894179894
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | intersect: 9683430233.481607
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | chi2: 0.8439916974511564
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | current chi2=0.8439916974511564 (change=71.55583478720072 %)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,279 | INFO     | sum of square deviations: 1931611487.8043506
[2026-01-12 11:14:52] 2026-01-12 16:13:50,280 | INFO     | sum of deviations: -15164922822.413046
[2026-01-12 11:14:52] 2026-01-12 16:13:50,280 | INFO     | mean x: 1768228813.5326087
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | mean y: 2560428.402173913
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | intersect: 13884779321.223879
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | chi2: 0.8130617460092255
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | current chi2=0.8130617460092255 (change=3.6647222401996284 %)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | left removable region: 20
[2026-01-12 11:14:52] 2026-01-12 16:13:50,281 | INFO     | sum of square deviations: 1470250675.7857175
[2026-01-12 11:14:52] 2026-01-12 16:13:50,282 | INFO     | sum of deviations: 6735028907.8928585
[2026-01-12 11:14:52] 2026-01-12 16:13:50,282 | INFO     | mean x: 1768228935.5357144
[2026-01-12 11:14:52] 2026-01-12 16:13:50,282 | INFO     | mean y: 2561225.101190476
[2026-01-12 11:14:52] 2026-01-12 16:13:50,282 | INFO     | intersect: -8097467697.001715
[2026-01-12 11:14:52] 2026-01-12 16:13:50,283 | INFO     | chi2: 0.0014099731917862556
[2026-01-12 11:14:52] 2026-01-12 16:13:50,283 | INFO     | current memory leak: 4.58 B/s (using 168 data points, chi2=0.00)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,283 | INFO     | could have reported an average CPU frequency of 3154 MHz (10 samples)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,283 | INFO     | ..............................
[2026-01-12 11:14:52] 2026-01-12 16:13:50,283 | INFO     | . Timing measurements:
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . get job = 0 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . initial setup = 2 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . payload setup = 9 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . stage-in = 0 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . payload execution = 11797 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . stage-out = 2 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | . log creation = 0 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,284 | INFO     | ..............................
[2026-01-12 11:14:52] 2026-01-12 16:13:50,564 | INFO     | 
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | job summary report
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | --------------------------------------------------
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | PanDA job id: 6966967238
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | task id: 48188640
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | errors: (none)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | pilot state: finished 
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | transexitcode: 0
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | exeerrorcode: 0
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | exeerrordiag: 
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | exitcode: 0
[2026-01-12 11:14:52] 2026-01-12 16:13:50,565 | INFO     | exitmsg: OK
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | cpuconsumptiontime: 34065 s
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | nevents: 400
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | neventsw: 0
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | pid: 1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | pgrp: 1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | corecount: 8
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | event service: False
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | sizes: {0: 2283971, 1: 2284170, 8: 2284432, 12: 2284460, 11810: 2314179, 11814: 2323177, 11817: 2323361, 11825: 2323555}
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | --------------------------------------------------
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | 
[2026-01-12 11:14:52] 2026-01-12 16:13:50,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-12 11:14:52] 2026-01-12 16:13:50,586 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,586 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,586 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,586 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,587 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | job 6966967238 has completed (purged errors)
[2026-01-12 11:14:52] 2026-01-12 16:13:50,588 | INFO     | overall cleanup function is called
[2026-01-12 11:14:52] 2026-01-12 16:13:51,597 | INFO     | --- collectZombieJob: --- 10, [1055749]
[2026-01-12 11:14:52] 2026-01-12 16:13:51,597 | INFO     | zombie collector waiting for pid 1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:51,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 11:14:52] 2026-01-12 16:13:51,598 | INFO     | collected zombie processes
[2026-01-12 11:14:52] 2026-01-12 16:13:51,598 | INFO     | will attempt to kill all subprocesses of pid=1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:52,103 | INFO     | process IDs to be killed: [1055749] (in reverse order)
[2026-01-12 11:14:52] 2026-01-12 16:13:52,259 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 11:14:52] 2026-01-12 16:13:52,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 11:14:52] 2026-01-12 16:13:52,276 | INFO     | did not find any defunct processes belonging to 1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:52,293 | INFO     | did not find any defunct processes belonging to 1055749
[2026-01-12 11:14:52] 2026-01-12 16:13:52,293 | INFO     | ready for new job
[2026-01-12 11:14:52] 2026-01-12 16:13:52,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 11:14:52] 2026-01-12 16:13:52,295 | INFO     | ***************************************
[2026-01-12 11:14:52] 2026-01-12 16:13:52,295 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 11:14:52] 2026-01-12 16:13:52,296 | INFO     | ***************************************
[2026-01-12 11:14:52] 2026-01-12 16:13:52,296 | INFO     | 
[2026-01-12 11:14:52] 2026-01-12 16:13:52,301 | INFO     | architecture information:
[2026-01-12 11:14:52] 2026-01-12 16:13:52,313 | INFO     | executing command: cat /etc/os-release
[2026-01-12 11:14:52] 2026-01-12 16:13:52,329 | INFO     | cat /etc/os-release:
[2026-01-12 11:14:52] NAME="CentOS Linux"
[2026-01-12 11:14:52] VERSION="7 (Core)"
[2026-01-12 11:14:52] ID="centos"
[2026-01-12 11:14:52] ID_LIKE="rhel fedora"
[2026-01-12 11:14:52] VERSION_ID="7"
[2026-01-12 11:14:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 11:14:52] ANSI_COLOR="0;31"
[2026-01-12 11:14:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 11:14:52] HOME_URL="https://www.centos.org/"
[2026-01-12 11:14:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 11:14:52] 
[2026-01-12 11:14:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 11:14:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 11:14:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 11:14:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 11:14:52] 
[2026-01-12 11:14:52] 2026-01-12 16:13:52,329 | INFO     | ***************************************
[2026-01-12 11:14:52] 2026-01-12 16:13:52,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-12 11:14:52] 2026-01-12 16:13:52,873 | INFO     | sufficient remaining disk space (70947700736 B)
[2026-01-12 11:14:52] 2026-01-12 16:13:52,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 11:14:52] 2026-01-12 16:13:52,873 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 11:14:52] 2026-01-12 16:13:52,873 | INFO     | update_server=False
[2026-01-12 11:14:52] 2026-01-12 16:13:52,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 11:14:52] 2026-01-12 16:13:52,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 11:14:52] 2026-01-12 16:13:52,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 11:14:52] 2026-01-12 16:13:53,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:14:52] 2026-01-12 16:13:53,145 | INFO     | aborting loop
[2026-01-12 11:14:52] 2026-01-12 16:13:53,509 | INFO     | all payload control threads have been joined
[2026-01-12 11:14:52] 2026-01-12 16:13:53,879 | INFO     | [job] retrieve thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:53,897 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:53,974 | INFO     | all data control threads have been joined
[2026-01-12 11:14:52] 2026-01-12 16:13:54,151 | INFO     | [job] job monitor thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,155 | INFO     | [payload] failed_post thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,160 | INFO     | [data] copytool_in thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,262 | INFO     | [payload] validate_post thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,370 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,515 | INFO     | [payload] control thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,581 | INFO     | all job control threads have been joined
[2026-01-12 11:14:52] 2026-01-12 16:13:54,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,754 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,881 | INFO     | [data] copytool_out thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:54,982 | INFO     | [data] control thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:55,384 | INFO     | [job] validate thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:55,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:14:52] 2026-01-12 16:13:55,587 | INFO     | [job] control thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:56,394 | INFO     | [job] queue monitor thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:13:56,883 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 11:14:52] 2026-01-12 16:14:22,955 | INFO     | PID=1049318 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 11:14:52] 2026-01-12 16:14:22,955 | INFO     | .. there are 18 such processes running
[2026-01-12 11:14:52] 2026-01-12 16:14:22,955 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 11:14:52] 2026-01-12 16:14:22,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 11:14:52] 2026-01-12 16:14:22,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 11:14:52] 2026-01-12 16:14:45,178 | INFO     | [monitor] cgroup control has ended
[2026-01-12 11:14:52] 2026-01-12 16:14:47,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724395816768)>', '<ExcThread(monitor, started 139724052219648)>']
[2026-01-12 11:14:52] 2026-01-12 16:14:48,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 11:14:52] 2026-01-12 16:14:48,122 | INFO     | [monitor] control thread has ended
[2026-01-12 11:14:52] 2026-01-12 16:14:52,146 | INFO     | all workflow threads have been joined
[2026-01-12 11:14:52] 2026-01-12 16:14:52,146 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 11:14:52] 2026-01-12 16:14:52,147 | INFO     | traces error code: 0
[2026-01-12 11:14:52] 2026-01-12 16:14:52,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 11:14:52] 2026-01-12 16:14:52,268 [wrapper] ==== pilot stdout END ====
[2026-01-12 11:14:52] 2026-01-12 16:14:52,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 11:14:52] 2026-01-12 16:14:52,273 [wrapper] pilotpid: 1049318
[2026-01-12 11:14:52] 2026-01-12 16:14:52,275 [wrapper] Pilot exit status: 0
[2026-01-12 11:14:52] 2026-01-12 16:14:52,293 [wrapper] pandaids: 6966967238
[2026-01-12 11:14:52] 2026-01-12 16:14:52,443 [wrapper] cleanup supervisor_pilot 1569578 1049319
[2026-01-12 11:14:52] 2026-01-12 16:14:52,479 [wrapper] Test setup, not cleaning
[2026-01-12 11:14:52] 2026-01-12 16:14:52,488 [wrapper] apfmon messages muted
[2026-01-12 11:14:52] 2026-01-12 16:14:52,490 [wrapper] ==== wrapper stdout END ====
[2026-01-12 11:14:52] 2026-01-12 16:14:52,493 [wrapper] ==== wrapper stderr END ====
[2026-01-12 11:14:52]  *** Error codes and diagnostics ***
[2026-01-12 11:14:52]     "exeErrorCode": 0,
[2026-01-12 11:14:52]     "exeErrorDiag": "",
[2026-01-12 11:14:52]     "pilotErrorCode": 0,
[2026-01-12 11:14:52]     "pilotErrorDiag": "",
[2026-01-12 11:14:52]  *** Listing of results directory ***
[2026-01-12 11:14:52] total 494584
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:21 pilot3.tar.gz
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:26 queuedata.json
[2026-01-12 11:14:52] -rwx------. 1 boincer umatlas     36322 Jan 12 07:26 runpilot2-wrapper.sh
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas       100 Jan 12 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 11:14:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 07:56 run_atlas
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas       105 Jan 12 07:56 job.xml
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas 292803689 Jan 12 07:56 EVNT.48188638._000008.pool.root.1
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:56 start_atlas.sh
[2026-01-12 11:14:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 07:56 shared
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas    592422 Jan 12 07:56 input.tar.gz
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas         0 Jan 12 07:56 boinc_lockfile
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas      2650 Jan 12 07:56 pandaJob.out
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas        57 Jan 12 07:56 setup.sh.local
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas    987696 Jan 12 07:56 agis_schedconf.cvmfs.json
[2026-01-12 11:14:52] drwx------. 5 boincer umatlas      4096 Jan 12 07:56 pilot3
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas      6945 Jan 12 11:11 init_data.xml
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas 205692327 Jan 12 11:13 HITS.48188640._000191.pool.root.1
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas       530 Jan 12 11:13 boinc_task_state.xml
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas      1031 Jan 12 11:13 memory_monitor_summary.json
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas   1516240 Jan 12 11:13 agis_ddmendpoints.agis.ALL.json
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas    452286 Jan 12 11:13 log.48188640._000191.job.log.tgz.1
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas        95 Jan 12 11:13 pilot_heartbeat.json
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas      7757 Jan 12 11:13 heartbeat.json
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 11:14 boinc_mmap_file
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas        28 Jan 12 11:14 wrapper_checkpoint.txt
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas      4824 Jan 12 11:14 pilotlog.txt
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas   1570990 Jan 12 11:14 log.48188640._000191.job.log.1
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas       357 Jan 12 11:14 output.list
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas       620 Jan 12 11:14 runtime_log
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas   2037760 Jan 12 11:14 result.tar.gz
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas       655 Jan 12 11:14 zqrMDmcBWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJcnKDmn9Nkwn.diag
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas      9338 Jan 12 11:14 runtime_log.err
[2026-01-12 11:14:52] -rw-r--r--. 1 boincer umatlas     21419 Jan 12 11:14 stderr.txt
[2026-01-12 11:14:52] HITS file was successfully produced:
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas 205692327 Jan 12 11:13 shared/HITS.pool.root.1
[2026-01-12 11:14:52]  *** Contents of shared directory: ***
[2026-01-12 11:14:52] total 489408
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas 292803689 Jan 12 07:56 ATLAS.root_0
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 07:56 start_atlas.sh
[2026-01-12 11:14:52] -rw-r--r--. 2 boincer umatlas    592422 Jan 12 07:56 input.tar.gz
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas 205692327 Jan 12 11:13 HITS.pool.root.1
[2026-01-12 11:14:52] -rw-------. 1 boincer umatlas   2037760 Jan 12 11:14 result.tar.gz
11:14:53 (1044967): run_atlas exited; CPU time 34473.978452
11:14:53 (1044967): called boinc_finish(0)

</stderr_txt>
]]>

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