Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:42:20 (60963): wrapper (7.7.26015): starting
09:42:20 (60963): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 09:42:20] Arguments: --nthreads 9
[2026-01-12 09:42:20] Threads: 9
[2026-01-12 09:42:20] Checking for CVMFS
[2026-01-12 09:42:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 09:42:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 09:42:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 09:42:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 09:42:21] 2.13.3.0 11820 27330 159168 155055 0 234 40278479 40960001 17960 16776704 0 40801240 99.768 27030408 47633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 09:42:21] CVMFS is ok
[2026-01-12 09:42:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 09:42:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 09:42:21] Further information can be found at the LHC@home message board.
[2026-01-12 09:42:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 09:42:21] Checking for apptainer binary...
[2026-01-12 09:42:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 09:42:21] Running /usr/bin/apptainer --version
[2026-01-12 09:42:21] apptainer version 1.4.5-2.el9
[2026-01-12 09:42:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 09:42:21] c-212-10.aglt2.org
[2026-01-12 09:42:21] apptainer works
[2026-01-12 09:42:21] Set ATHENA_PROC_NUMBER=9
[2026-01-12 09:42:21] Set ATHENA_CORE_NUMBER=9
[2026-01-12 09:42:21] Starting ATLAS job with PandaID=6966967055
[2026-01-12 09:42:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 11:11:38]  *** The last 200 lines of the pilot log: ***
[2026-01-12 11:11:38] ]
[2026-01-12 11:11:38] 2026-01-12 16:08:46,950 | INFO     | transferring file log.48188640._000008.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6966967055/log.48188640._000008.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 11:11:38] 2026-01-12 16:08:46,950 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6966967055/log.48188640._000008.job.log.tgz.1 /tmp/boinchome/slots/4/log.48188640._000008.job
[2026-01-12 11:11:38] 2026-01-12 16:08:46,969 | INFO     | adding to output.list: log.48188640._000008.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/ff/log.48188640._000008.job.log.tg
[2026-01-12 11:11:38] 2026-01-12 16:08:46,970 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 11:11:38] 2026-01-12 16:08:46,970 | INFO     | summary of transferred files:
[2026-01-12 11:11:38] 2026-01-12 16:08:46,970 | INFO     |  -- lfn=log.48188640._000008.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 11:11:38] 2026-01-12 16:08:46,971 | INFO     | stage-out finished correctly
[2026-01-12 11:11:38] 2026-01-12 16:08:47,426 | INFO     | time since job start (5160s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:48,618 | INFO     | monitor loop #366: job 0:6966967055 is in state 'finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:48,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:11:38] 2026-01-12 16:08:49,431 | INFO     | time since job start (5162s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:50,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 11:11:38] 2026-01-12 16:08:51,122 | INFO     | monitor loop #367: job 0:6966967055 is in state 'finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:51,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:11:38] 2026-01-12 16:08:51,437 | INFO     | time since job start (5164s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:53,195 | INFO     | job 6966967055 has state=finished
[2026-01-12 11:11:38] 2026-01-12 16:08:53,195 | INFO     | preparing for final server update for job 6966967055 in state='finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:53,196 | INFO     | this job has now completed (state=finished)
[2026-01-12 11:11:38] 2026-01-12 16:08:53,196 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 11:11:38] 2026-01-12 16:08:53,196 | INFO     | log transfer has been attempted: DONE
[2026-01-12 11:11:38] 2026-01-12 16:08:53,196 | INFO     | job 6966967055 has finished - writing final server update
[2026-01-12 11:11:38] 2026-01-12 16:08:53,196 | INFO     | total number of processed events: 400 (read)
[2026-01-12 11:11:38] 2026-01-12 16:08:53,206 | INFO     | executing command: lscpu
[2026-01-12 11:11:38] 2026-01-12 16:08:53,263 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 11:11:38] 2026-01-12 16:08:53,444 | INFO     | time since job start (5166s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:53,627 | INFO     | monitor loop #368: job 0:6966967055 is in state 'finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:53,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:11:38] 2026-01-12 16:08:55,469 | INFO     | time since job start (5168s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:56,132 | INFO     | monitor loop #369: job 0:6966967055 is in state 'finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:56,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:11:38] 2026-01-12 16:08:57,477 | INFO     | time since job start (5170s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:08:58,637 | INFO     | monitor loop #370: job 0:6966967055 is in state 'finished'
[2026-01-12 11:11:38] 2026-01-12 16:08:58,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 11:11:38] 2026-01-12 16:08:58,917 | INFO     | PID=64951 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 11:11:38] 2026-01-12 16:08:58,918 | INFO     | .. there are 17 such processes running
[2026-01-12 11:11:38] 2026-01-12 16:08:59,918 | INFO     | time since job start (5172s) is within the limit (349056.0s)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,213 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 11:11:38] 2026-01-12 16:09:00,218 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3220.5324583333345
[2026-01-12 11:11:38] 2026-01-12 16:09:00,230 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6966967055/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,230 | INFO     | extracted standard info from prmon json
[2026-01-12 11:11:38] 2026-01-12 16:09:00,231 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 11:11:38] 2026-01-12 16:09:00,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 11:11:38] 2026-01-12 16:09:00,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 11:11:38] 2026-01-12 16:09:00,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 11:11:38] 2026-01-12 16:09:00,232 | INFO     | fitting pss+swap vs Time
[2026-01-12 11:11:38] 2026-01-12 16:09:00,232 | INFO     | sum of square deviations: 141539398.0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | sum of deviations: -2024509907.0000005
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | mean x: 1768231642.0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | mean y: 2664828.6233766233
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | intersect: 25294580208.254128
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | chi2: 0.22255649553673462
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | current memory leak: -14.30 B/s (using 77 data points, chi2=0.22)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | could have reported an average CPU frequency of 3201 MHz (6 samples)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | ..............................
[2026-01-12 11:11:38] 2026-01-12 16:09:00,233 | INFO     | . Timing measurements:
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . get job = 0 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . initial setup = 3 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . payload setup = 15 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . stage-in = 0 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . payload execution = 5112 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . stage-out = 0 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | . log creation = 0 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,234 | INFO     | ..............................
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | 
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | job summary report
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | --------------------------------------------------
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | PanDA job id: 6966967055
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | task id: 48188640
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | errors: (none)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 11:11:38] 2026-01-12 16:09:00,486 | INFO     | pilot state: finished 
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | transexitcode: 0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | exeerrorcode: 0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | exeerrordiag: 
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | exitcode: 0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | exitmsg: OK
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | cpuconsumptiontime: 32997 s
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | nevents: 400
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | neventsw: 0
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | pid: 73253
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | pgrp: 73253
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | corecount: 9
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | event service: False
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | sizes: {0: 2284132, 10: 2284394, 11: 2284422, 5131: 2310879, 5132: 2319877, 5136: 2319933, 5145: 2320255}
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | --------------------------------------------------
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | 
[2026-01-12 11:11:38] 2026-01-12 16:09:00,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,517 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 11:11:38] 2026-01-12 16:09:00,517 | INFO     | job 6966967055 has completed (purged errors)
[2026-01-12 11:11:38] 2026-01-12 16:09:00,517 | INFO     | overall cleanup function is called
[2026-01-12 11:11:38] 2026-01-12 16:09:01,525 | INFO     | --- collectZombieJob: --- 10, [73253]
[2026-01-12 11:11:38] 2026-01-12 16:09:01,525 | INFO     | zombie collector waiting for pid 73253
[2026-01-12 11:11:38] 2026-01-12 16:09:01,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 11:11:38] 2026-01-12 16:09:01,525 | INFO     | collected zombie processes
[2026-01-12 11:11:38] 2026-01-12 16:09:01,526 | INFO     | will attempt to kill all subprocesses of pid=73253
[2026-01-12 11:11:38] 2026-01-12 16:09:01,918 | INFO     | process IDs to be killed: [73253] (in reverse order)
[2026-01-12 11:11:38] 2026-01-12 16:09:02,285 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 11:11:38] 2026-01-12 16:09:02,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 11:11:38] 2026-01-12 16:09:02,298 | INFO     | did not find any defunct processes belonging to 73253
[2026-01-12 11:11:38] 2026-01-12 16:09:02,310 | INFO     | did not find any defunct processes belonging to 73253
[2026-01-12 11:11:38] 2026-01-12 16:09:02,310 | INFO     | ready for new job
[2026-01-12 11:11:38] 2026-01-12 16:09:02,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 11:11:38] 2026-01-12 16:09:02,311 | INFO     | ***************************************
[2026-01-12 11:11:38] 2026-01-12 16:09:02,311 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 11:11:38] 2026-01-12 16:09:02,312 | INFO     | ***************************************
[2026-01-12 11:11:38] 2026-01-12 16:09:02,312 | INFO     | 
[2026-01-12 11:11:38] 2026-01-12 16:09:02,316 | INFO     | architecture information:
[2026-01-12 11:11:38] 2026-01-12 16:09:02,316 | INFO     | executing command: cat /etc/os-release
[2026-01-12 11:11:38] 2026-01-12 16:09:02,337 | INFO     | cat /etc/os-release:
[2026-01-12 11:11:38] NAME="CentOS Linux"
[2026-01-12 11:11:38] VERSION="7 (Core)"
[2026-01-12 11:11:38] ID="centos"
[2026-01-12 11:11:38] ID_LIKE="rhel fedora"
[2026-01-12 11:11:38] VERSION_ID="7"
[2026-01-12 11:11:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 11:11:38] ANSI_COLOR="0;31"
[2026-01-12 11:11:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 11:11:38] HOME_URL="https://www.centos.org/"
[2026-01-12 11:11:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 11:11:38] 
[2026-01-12 11:11:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 11:11:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 11:11:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 11:11:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 11:11:38] 
[2026-01-12 11:11:38] 2026-01-12 16:09:02,337 | INFO     | ***************************************
[2026-01-12 11:11:38] 2026-01-12 16:09:02,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-12 11:11:38] 2026-01-12 16:09:02,860 | INFO     | sufficient remaining disk space (125076242432 B)
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | INFO     | update_server=False
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | INFO     | aborting loop
[2026-01-12 11:11:38] 2026-01-12 16:09:02,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 11:11:38] 2026-01-12 16:09:02,988 | INFO     | all job control threads have been joined
[2026-01-12 11:11:38] 2026-01-12 16:09:03,614 | INFO     | all data control threads have been joined
[2026-01-12 11:11:38] 2026-01-12 16:09:03,866 | INFO     | [job] retrieve thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:03,867 | INFO     | [job] job monitor thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:03,993 | INFO     | [job] control thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:04,117 | INFO     | [data] copytool_in thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:04,209 | INFO     | all payload control threads have been joined
[2026-01-12 11:11:38] 2026-01-12 16:09:04,620 | INFO     | [data] control thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:04,867 | INFO     | [data] copytool_out thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:04,930 | INFO     | [job] validate thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:04,981 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,039 | INFO     | [payload] validate_post thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,151 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,170 | INFO     | [payload] failed_post thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,215 | INFO     | [payload] control thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,307 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:05,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:11:38] 2026-01-12 16:09:05,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 11:11:38] 2026-01-12 16:09:06,313 | INFO     | [job] queue monitor thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:09,449 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:13,229 | INFO     | job.realtimelogging is not enabled
[2026-01-12 11:11:38] 2026-01-12 16:09:14,236 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 11:11:38] 2026-01-12 16:09:33,517 | INFO     | PID=64951 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 11:11:38] 2026-01-12 16:09:33,517 | INFO     | .. there are 17 such processes running
[2026-01-12 11:11:38] 2026-01-12 16:09:33,518 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 11:11:38] 2026-01-12 16:09:33,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 11:11:38] 2026-01-12 16:09:33,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 11:11:38] 2026-01-12 16:09:55,736 | INFO     | [monitor] cgroup control has ended
[2026-01-12 11:11:38] 2026-01-12 16:09:57,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869249976128)>', '<ExcThread(monitor, started 139868889933568)>']
[2026-01-12 11:11:38] 2026-01-12 16:09:57,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 11:11:38] 2026-01-12 16:09:57,663 | INFO     | [monitor] control thread has ended
[2026-01-12 11:11:38] 2026-01-12 16:10:02,401 | INFO     | all workflow threads have been joined
[2026-01-12 11:11:38] 2026-01-12 16:10:02,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 11:11:38] 2026-01-12 16:10:02,402 | INFO     | traces error code: 0
[2026-01-12 11:11:38] 2026-01-12 16:10:02,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 11:11:38] 2026-01-12 16:10:02,507 [wrapper] ==== pilot stdout END ====
[2026-01-12 11:11:38] 2026-01-12 16:10:02,518 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 11:11:38] 2026-01-12 16:10:02,528 [wrapper] pilotpid: 64951
[2026-01-12 11:11:38] 2026-01-12 16:10:02,531 [wrapper] Pilot exit status: 0
[2026-01-12 11:11:38] 2026-01-12 16:10:02,582 [wrapper] pandaids: 6966967055
[2026-01-12 11:11:38] 2026-01-12 16:10:02,699 [wrapper] cleanup supervisor_pilot  255900 64952
[2026-01-12 11:11:38] 2026-01-12 16:10:02,702 [wrapper] Test setup, not cleaning
[2026-01-12 11:11:38] 2026-01-12 16:10:02,704 [wrapper] apfmon messages muted
[2026-01-12 11:11:38] 2026-01-12 16:10:02,706 [wrapper] ==== wrapper stdout END ====
[2026-01-12 11:11:38] 2026-01-12 16:10:02,708 [wrapper] ==== wrapper stderr END ====
[2026-01-12 11:11:38]  *** Error codes and diagnostics ***
[2026-01-12 11:11:38]     "exeErrorCode": 0,
[2026-01-12 11:11:38]     "exeErrorDiag": "",
[2026-01-12 11:11:38]     "pilotErrorCode": 0,
[2026-01-12 11:11:38]     "pilotErrorDiag": "",
[2026-01-12 11:11:38]  *** Listing of results directory ***
[2026-01-12 11:11:38] total 504016
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:21 pilot3.tar.gz
[2026-01-12 11:11:38] -rwx------. 1 boincer umatlas     36322 Jan 12 07:26 runpilot2-wrapper.sh
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:26 queuedata.json
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas       100 Jan 12 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 11:11:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 09:42 run_atlas
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas       105 Jan 12 09:42 job.xml
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas 294685259 Jan 12 09:42 EVNT.48188638._000001.pool.root.1
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 09:42 start_atlas.sh
[2026-01-12 11:11:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 09:42 shared
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas    592422 Jan 12 09:42 input.tar.gz
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas         0 Jan 12 09:42 boinc_lockfile
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas      2645 Jan 12 09:42 pandaJob.out
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas        57 Jan 12 09:42 setup.sh.local
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas    986112 Jan 12 09:42 agis_schedconf.cvmfs.json
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas   1516240 Jan 12 09:42 agis_ddmendpoints.agis.ALL.json
[2026-01-12 11:11:38] drwx------. 5 boincer umatlas      4096 Jan 12 09:42 pilot3
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas 215309725 Jan 12 11:08 HITS.48188640._000008.pool.root.1
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas       530 Jan 12 11:08 boinc_task_state.xml
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas      1027 Jan 12 11:08 memory_monitor_summary.json
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas    362820 Jan 12 11:08 log.48188640._000008.job.log.tgz.1
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas      7758 Jan 12 11:09 heartbeat.json
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas        95 Jan 12 11:09 pilot_heartbeat.json
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas      4895 Jan 12 11:10 pilotlog.txt
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas    740180 Jan 12 11:10 log.48188640._000008.job.log.1
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas       357 Jan 12 11:10 output.list
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas       620 Jan 12 11:10 runtime_log
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas   1126400 Jan 12 11:10 result.tar.gz
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas      9342 Jan 12 11:10 runtime_log.err
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas       652 Jan 12 11:10 dy5MDmsAWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRbnKDm3lD6Om.diag
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas        27 Jan 12 11:11 wrapper_checkpoint.txt
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas      6958 Jan 12 11:11 init_data.xml
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 11:11 boinc_mmap_file
[2026-01-12 11:11:38] -rw-r--r--. 1 boincer umatlas     22471 Jan 12 11:11 stderr.txt
[2026-01-12 11:11:38] HITS file was successfully produced:
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas 215309725 Jan 12 11:08 shared/HITS.pool.root.1
[2026-01-12 11:11:38]  *** Contents of shared directory: ***
[2026-01-12 11:11:38] total 499744
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas 294685259 Jan 12 09:42 ATLAS.root_0
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 09:42 start_atlas.sh
[2026-01-12 11:11:38] -rw-r--r--. 2 boincer umatlas    592422 Jan 12 09:42 input.tar.gz
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas 215309725 Jan 12 11:08 HITS.pool.root.1
[2026-01-12 11:11:38] -rw-------. 1 boincer umatlas   1126400 Jan 12 11:10 result.tar.gz
11:11:40 (60963): run_atlas exited; CPU time 33157.746261
11:11:40 (60963): called boinc_finish(0)

</stderr_txt>
]]>

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