Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:45 (2942968): wrapper (7.7.26015): starting
11:28:45 (2942968): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 11:28:45] Arguments: --nthreads 8
[2026-01-12 11:28:45] Threads: 8
[2026-01-12 11:28:45] Checking for CVMFS
[2026-01-12 11:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 11:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 11:28:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 11:28:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 11:28:47] 2.13.3.0 8993 18754 113424 155059 0 93 32468158 40960000 32484 16776704 0 58500701 99.879 28478658 45528 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 11:28:47] CVMFS is ok
[2026-01-12 11:28:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 11:28:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 11:28:47] Further information can be found at the LHC@home message board.
[2026-01-12 11:28:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 11:28:47] Checking for apptainer binary...
[2026-01-12 11:28:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 11:28:47] Running /usr/bin/apptainer --version
[2026-01-12 11:28:47] apptainer version 1.4.5-2.el9
[2026-01-12 11:28:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 11:28:47] c-208-40.aglt2.org
[2026-01-12 11:28:47] apptainer works
[2026-01-12 11:28:47] Set ATHENA_PROC_NUMBER=8
[2026-01-12 11:28:47] Set ATHENA_CORE_NUMBER=8
[2026-01-12 11:28:48] Starting ATLAS job with PandaID=6966967143
[2026-01-12 11:28:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:02:05]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:02:05]  status=None
[2026-01-12 13:02:05]  status_code=0
[2026-01-12 13:02:05]  storage_token=
[2026-01-12 13:02:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966967143/log.48188640._000096.job.log.tgz.1
[2026-01-12 13:02:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/2c/log.48188640._000096.job.log.tgz.1
[2026-01-12 13:02:05]  workdir=None
[2026-01-12 13:02:05] ]
[2026-01-12 13:02:05] 2026-01-12 18:01:25,129 | INFO     | transferring file log.48188640._000096.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966967143/log.48188640._000096.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-12 13:02:05] 2026-01-12 18:01:25,129 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966967143/log.48188640._000096.job.log.tgz.1 /tmp/boinchome/slots/0/log.48188640._000096.job
[2026-01-12 13:02:05] 2026-01-12 18:01:25,156 | INFO     | adding to output.list: log.48188640._000096.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/2c/log.48188640._000096.job.log.tg
[2026-01-12 13:02:05] 2026-01-12 18:01:25,156 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-12 13:02:05] 2026-01-12 18:01:25,157 | INFO     | summary of transferred files:
[2026-01-12 13:02:05] 2026-01-12 18:01:25,157 | INFO     |  -- lfn=log.48188640._000096.job.log.tgz.1, status_code=0, status=transferred
[2026-01-12 13:02:05] 2026-01-12 18:01:25,157 | INFO     | stage-out finished correctly
[2026-01-12 13:02:05] 2026-01-12 18:01:25,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 13:02:05] 2026-01-12 18:01:25,374 | INFO     | time since job start (5505s) is within the limit (349056.0s)
[2026-01-12 13:02:05] 2026-01-12 18:01:25,826 | WARNING  | process 2957924 can no longer be monitored (due to stat problems) - aborting
[2026-01-12 13:02:05] 2026-01-12 18:01:25,826 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966967143/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:02:05] 2026-01-12 18:01:26,187 | INFO     | number of running child processes to parent process 2957924: 1
[2026-01-12 13:02:05] 2026-01-12 18:01:26,187 | INFO     | maximum number of monitored processes: 6
[2026-01-12 13:02:05] 2026-01-12 18:01:26,388 | INFO     | job 6966967143 has state=finished
[2026-01-12 13:02:05] 2026-01-12 18:01:26,388 | INFO     | preparing for final server update for job 6966967143 in state='finished'
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | this job has now completed (state=finished)
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | log transfer has been attempted: DONE
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | job 6966967143 has finished - writing final server update
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | total number of processed events: 400 (read)
[2026-01-12 13:02:05] 2026-01-12 18:01:26,389 | INFO     | executing command: lscpu
[2026-01-12 13:02:05] 2026-01-12 18:01:26,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 13:02:05] 2026-01-12 18:01:27,380 | INFO     | time since job start (5507s) is within the limit (349056.0s)
[2026-01-12 13:02:05] 2026-01-12 18:01:28,695 | INFO     | monitor loop #388: job 0:6966967143 is in state 'finished'
[2026-01-12 13:02:05] 2026-01-12 18:01:28,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:02:05] 2026-01-12 18:01:29,387 | INFO     | time since job start (5509s) is within the limit (349056.0s)
[2026-01-12 13:02:05] 2026-01-12 18:01:31,213 | INFO     | monitor loop #389: job 0:6966967143 is in state 'finished'
[2026-01-12 13:02:05] 2026-01-12 18:01:31,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:02:05] 2026-01-12 18:01:31,394 | INFO     | time since job start (5511s) is within the limit (349056.0s)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,243 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 13:02:05] 2026-01-12 18:01:33,248 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1680234375017
[2026-01-12 13:02:05] 2026-01-12 18:01:33,261 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966967143/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,261 | INFO     | extracted standard info from prmon json
[2026-01-12 13:02:05] 2026-01-12 18:01:33,261 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:02:05] 2026-01-12 18:01:33,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:02:05] 2026-01-12 18:01:33,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 13:02:05] 2026-01-12 18:01:33,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | sum of square deviations: 170944600.5
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | sum of deviations: -6474846982.5
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | mean x: 1768238244.5
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | mean y: 2666276.93902439
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | intersect: 66978002311.26977
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | chi2: 0.2833750520564864
[2026-01-12 13:02:05] 2026-01-12 18:01:33,263 | INFO     | current memory leak: -37.88 B/s (using 82 data points, chi2=0.28)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | ..............................
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . Timing measurements:
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . get job = 0 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . initial setup = 4 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . payload setup = 22 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . stage-in = 0 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . payload execution = 5426 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . stage-out = 0 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | . log creation = 0 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,264 | INFO     | ..............................
[2026-01-12 13:02:05] 2026-01-12 18:01:33,312 | INFO     | 
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | job summary report
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | --------------------------------------------------
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | PanDA job id: 6966967143
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | task id: 48188640
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | errors: (none)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | pilot state: finished 
[2026-01-12 13:02:05] 2026-01-12 18:01:33,313 | INFO     | transexitcode: 0
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | exeerrorcode: 0
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | exeerrordiag: 
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | exitcode: 0
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | exitmsg: OK
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | cpuconsumptiontime: 23635 s
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | nevents: 400
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | neventsw: 0
[2026-01-12 13:02:05] 2026-01-12 18:01:33,314 | INFO     | pid: 2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | pgrp: 2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | corecount: 8
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | event service: False
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | sizes: {0: 2283310, 1: 2284166, 2: 2284166, 12: 2284194, 23: 2284222, 28: 2284512, 34: 2284668, 5453: 2311346, 5454: 2311345, 5455: 2320455, 5463: 2320593}
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | --------------------------------------------------
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | 
[2026-01-12 13:02:05] 2026-01-12 18:01:33,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:02:05] 2026-01-12 18:01:33,345 | INFO     | job 6966967143 has completed (purged errors)
[2026-01-12 13:02:05] 2026-01-12 18:01:33,348 | INFO     | overall cleanup function is called
[2026-01-12 13:02:05] 2026-01-12 18:01:34,357 | INFO     | --- collectZombieJob: --- 10, [2957924]
[2026-01-12 13:02:05] 2026-01-12 18:01:34,357 | INFO     | zombie collector waiting for pid 2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:34,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:02:05] 2026-01-12 18:01:34,357 | INFO     | collected zombie processes
[2026-01-12 13:02:05] 2026-01-12 18:01:34,357 | INFO     | will attempt to kill all subprocesses of pid=2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:35,116 | INFO     | process IDs to be killed: [2957924] (in reverse order)
[2026-01-12 13:02:05] 2026-01-12 18:01:35,281 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:02:05] 2026-01-12 18:01:35,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:02:05] 2026-01-12 18:01:35,300 | INFO     | did not find any defunct processes belonging to 2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:35,315 | INFO     | did not find any defunct processes belonging to 2957924
[2026-01-12 13:02:05] 2026-01-12 18:01:35,315 | INFO     | ready for new job
[2026-01-12 13:02:05] 2026-01-12 18:01:35,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:02:05] 2026-01-12 18:01:35,317 | INFO     | ***************************************
[2026-01-12 13:02:05] 2026-01-12 18:01:35,318 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:02:05] 2026-01-12 18:01:35,318 | INFO     | ***************************************
[2026-01-12 13:02:05] 2026-01-12 18:01:35,318 | INFO     | 
[2026-01-12 13:02:05] 2026-01-12 18:01:35,322 | INFO     | architecture information:
[2026-01-12 13:02:05] 2026-01-12 18:01:35,322 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:02:05] 2026-01-12 18:01:35,396 | INFO     | cat /etc/os-release:
[2026-01-12 13:02:05] NAME="CentOS Linux"
[2026-01-12 13:02:05] VERSION="7 (Core)"
[2026-01-12 13:02:05] ID="centos"
[2026-01-12 13:02:05] ID_LIKE="rhel fedora"
[2026-01-12 13:02:05] VERSION_ID="7"
[2026-01-12 13:02:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:02:05] ANSI_COLOR="0;31"
[2026-01-12 13:02:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:02:05] HOME_URL="https://www.centos.org/"
[2026-01-12 13:02:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:02:05] 
[2026-01-12 13:02:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:02:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:02:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:02:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:02:05] 
[2026-01-12 13:02:05] 2026-01-12 18:01:35,396 | INFO     | ***************************************
[2026-01-12 13:02:05] 2026-01-12 18:01:35,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 13:02:05] 2026-01-12 18:01:35,943 | INFO     | sufficient remaining disk space (167710294016 B)
[2026-01-12 13:02:05] 2026-01-12 18:01:35,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:02:05] 2026-01-12 18:01:35,944 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:02:05] 2026-01-12 18:01:35,944 | INFO     | update_server=False
[2026-01-12 13:02:05] 2026-01-12 18:01:35,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:02:05] 2026-01-12 18:01:35,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:02:05] 2026-01-12 18:01:35,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:02:05] 2026-01-12 18:01:35,996 | INFO     | all job control threads have been joined
[2026-01-12 13:02:05] 2026-01-12 18:01:36,235 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 13:02:05] 2026-01-12 18:01:36,235 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 13:02:05] 2026-01-12 18:01:36,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:02:05] 2026-01-12 18:01:36,236 | INFO     | will abort loop
[2026-01-12 13:02:05] 2026-01-12 18:01:36,868 | INFO     | all payload control threads have been joined
[2026-01-12 13:02:05] 2026-01-12 18:01:36,873 | INFO     | all data control threads have been joined
[2026-01-12 13:02:05] 2026-01-12 18:01:36,949 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,001 | INFO     | [job] control thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,211 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,241 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,874 | INFO     | [payload] control thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,879 | INFO     | [data] control thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,923 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:37,956 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,082 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,125 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,132 | INFO     | [job] validate thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,187 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,222 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:38,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:02:05] 2026-01-12 18:01:38,472 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:39,341 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:39,952 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:02:05] 2026-01-12 18:01:49,461 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:02:05] 2026-01-12 18:01:50,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659326342976)>', '<ExcThread(monitor, started 139658948228864)>']
[2026-01-12 13:02:05] 2026-01-12 18:01:55,677 | INFO     | all workflow threads have been joined
[2026-01-12 13:02:05] 2026-01-12 18:01:55,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:02:05] 2026-01-12 18:01:55,677 | INFO     | traces error code: 0
[2026-01-12 13:02:05] 2026-01-12 18:01:55,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:02:05] 2026-01-12 18:02:04,997 | INFO     | PID=2947678 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:02:05] 2026-01-12 18:02:04,997 | INFO     | .. there are 22 such processes running
[2026-01-12 13:02:05] 2026-01-12 18:02:04,997 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:02:05] 2026-01-12 18:02:04,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:02:05] 2026-01-12 18:02:04,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:02:05] 2026-01-12 18:02:04,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:02:05] 2026-01-12 18:02:04,998 | INFO     | [monitor] control thread has ended
[2026-01-12 13:02:05] 2026-01-12 18:02:05,169 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:02:05] 2026-01-12 18:02:05,195 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:02:05] 2026-01-12 18:02:05,198 [wrapper] pilotpid: 2947678
[2026-01-12 13:02:05] 2026-01-12 18:02:05,266 [wrapper] Pilot exit status: 0
[2026-01-12 13:02:05] 2026-01-12 18:02:05,350 [wrapper] pandaids: 6966967143
[2026-01-12 13:02:05] 2026-01-12 18:02:05,579 [wrapper] cleanup supervisor_pilot 3230263 2947679
[2026-01-12 13:02:05] 2026-01-12 18:02:05,585 [wrapper] Test setup, not cleaning
[2026-01-12 13:02:05] 2026-01-12 18:02:05,588 [wrapper] apfmon messages muted
[2026-01-12 13:02:05] 2026-01-12 18:02:05,591 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:02:05] 2026-01-12 18:02:05,593 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:02:05]  *** Error codes and diagnostics ***
[2026-01-12 13:02:05]     "exeErrorCode": 0,
[2026-01-12 13:02:05]     "exeErrorDiag": "",
[2026-01-12 13:02:05]     "pilotErrorCode": 0,
[2026-01-12 13:02:05]     "pilotErrorDiag": "",
[2026-01-12 13:02:05]  *** Listing of results directory ***
[2026-01-12 13:02:05] total 495468
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 07:21 pilot3.tar.gz
[2026-01-12 13:02:05] -rwx------. 1 boincer umatlas     36322 Jan 12 07:26 runpilot2-wrapper.sh
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 07:26 queuedata.json
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas       100 Jan 12 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:02:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 11:28 run_atlas
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas       105 Jan 12 11:28 job.xml
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas 290630767 Jan 12 11:28 EVNT.48188638._000004.pool.root.1
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 11:28 start_atlas.sh
[2026-01-12 13:02:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 11:28 shared
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas    592423 Jan 12 11:28 input.tar.gz
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas         0 Jan 12 11:28 boinc_lockfile
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas      2648 Jan 12 11:28 pandaJob.out
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas        57 Jan 12 11:28 setup.sh.local
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas    988542 Jan 12 11:29 agis_schedconf.cvmfs.json
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas   1516240 Jan 12 11:29 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:02:05] drwx------. 5 boincer umatlas      4096 Jan 12 11:29 pilot3
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas 210499123 Jan 12 13:00 HITS.48188640._000096.pool.root.1
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas       529 Jan 12 13:00 boinc_task_state.xml
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas        95 Jan 12 13:01 pilot_heartbeat.json
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas      1032 Jan 12 13:01 memory_monitor_summary.json
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas    370219 Jan 12 13:01 log.48188640._000096.job.log.tgz.1
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas      7768 Jan 12 13:01 heartbeat.json
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas      7184 Jan 12 13:01 init_data.xml
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas       823 Jan 12 13:02 pilotlog.txt
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas        27 Jan 12 13:02 wrapper_checkpoint.txt
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 13:02 boinc_mmap_file
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas    783745 Jan 12 13:02 log.48188640._000096.job.log.1
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas       357 Jan 12 13:02 output.list
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas       620 Jan 12 13:02 runtime_log
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas   1177600 Jan 12 13:02 result.tar.gz
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas       653 Jan 12 13:02 SNwNDmsAWz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7bnKDmla3g0m.diag
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas      9342 Jan 12 13:02 runtime_log.err
[2026-01-12 13:02:05] -rw-r--r--. 1 boincer umatlas     22129 Jan 12 13:02 stderr.txt
[2026-01-12 13:02:05] HITS file was successfully produced:
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas 210499123 Jan 12 13:00 shared/HITS.pool.root.1
[2026-01-12 13:02:05]  *** Contents of shared directory: ***
[2026-01-12 13:02:05] total 491144
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas 290630767 Jan 12 11:28 ATLAS.root_0
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 11:28 start_atlas.sh
[2026-01-12 13:02:05] -rw-r--r--. 2 boincer umatlas    592423 Jan 12 11:28 input.tar.gz
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas 210499123 Jan 12 13:00 HITS.pool.root.1
[2026-01-12 13:02:05] -rw-------. 1 boincer umatlas   1177600 Jan 12 13:02 result.tar.gz
13:02:07 (2942968): run_atlas exited; CPU time 23775.052388
13:02:07 (2942968): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN