Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
19:29:51 (4084715): wrapper (7.7.26015): starting
19:29:51 (4084715): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 19:29:51] Arguments: --nthreads 4
[2026-01-12 19:29:51] Threads: 4
[2026-01-12 19:29:51] Checking for CVMFS
[2026-01-12 19:29:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 19:29:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 19:29:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 19:29:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 19:29:52] 2.13.3.0 3346151 5303 42264 155061 0 68 32976458 33554433 0 130560 0 2470725 99.988 182522 218 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-12 19:29:52] CVMFS is ok
[2026-01-12 19:29:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 19:29:52] Checking for apptainer binary...
[2026-01-12 19:29:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 19:29:52] Running /usr/bin/apptainer --version
[2026-01-12 19:29:52] apptainer version 1.4.4
[2026-01-12 19:29:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 19:29:52] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-12 19:29:52] apptainer works
[2026-01-12 19:29:52] Set ATHENA_PROC_NUMBER=4
[2026-01-12 19:29:52] Set ATHENA_CORE_NUMBER=4
[2026-01-12 19:29:52] Starting ATLAS job with PandaID=6966840805
[2026-01-12 19:29:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:36:03]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:36:03] 2026-01-13 00:35:25,763 | INFO     | monitor loop #1924: job 0:6966840805 is in state 'finished'
[2026-01-13 02:36:03] 2026-01-13 00:35:25,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:36:03] 2026-01-13 00:35:26,548 | INFO     | time since job start (25528s) is within the limit (349056.0s)
[2026-01-13 02:36:03] 2026-01-13 00:35:27,128 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 02:36:03] 2026-01-13 00:35:28,266 | INFO     | monitor loop #1925: job 0:6966840805 is in state 'finished'
[2026-01-13 02:36:03] 2026-01-13 00:35:28,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:36:03] 2026-01-13 00:35:28,553 | INFO     | time since job start (25530s) is within the limit (349056.0s)
[2026-01-13 02:36:03] 2026-01-13 00:35:30,003 | INFO     | job 6966840805 has state=finished
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | preparing for final server update for job 6966840805 in state='finished'
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | this job has now completed (state=finished)
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | log transfer has been attempted: DONE
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | job 6966840805 has finished - writing final server update
[2026-01-13 02:36:03] 2026-01-13 00:35:30,004 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 02:36:03] 2026-01-13 00:35:30,005 | INFO     | executing command: lscpu
[2026-01-13 02:36:03] 2026-01-13 00:35:30,020 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 02:36:03] 2026-01-13 00:35:30,558 | INFO     | time since job start (25532s) is within the limit (349056.0s)
[2026-01-13 02:36:03] 2026-01-13 00:35:30,769 | INFO     | monitor loop #1926: job 0:6966840805 is in state 'finished'
[2026-01-13 02:36:03] 2026-01-13 00:35:30,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,961 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 02:36:03] 2026-01-13 00:35:31,964 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4052.867333333334
[2026-01-13 02:36:03] 2026-01-13 00:35:31,965 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6966840805/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,966 | INFO     | extracted standard info from prmon json
[2026-01-13 02:36:03] 2026-01-13 00:35:31,966 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 02:36:03] 2026-01-13 00:35:31,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 02:36:03] 2026-01-13 00:35:31,968 | INFO     | fitting pss+swap vs Time
[2026-01-13 02:36:03] 2026-01-13 00:35:31,968 | INFO     | sum of square deviations: 22809606905.990402
[2026-01-13 02:36:03] 2026-01-13 00:35:31,970 | INFO     | sum of deviations: 2669898023552.9434
[2026-01-13 02:36:03] 2026-01-13 00:35:31,970 | INFO     | mean x: 1768251768.0047734
[2026-01-13 02:36:03] 2026-01-13 00:35:31,970 | INFO     | mean y: 3316200.0286396183
[2026-01-13 02:36:03] 2026-01-13 00:35:31,970 | INFO     | intersect: -206973152969.1998
[2026-01-13 02:36:03] 2026-01-13 00:35:31,971 | INFO     | chi2: 36.40814681023116
[2026-01-13 02:36:03] 2026-01-13 00:35:31,971 | INFO     | sum of square deviations: 22002736573.490192
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | sum of deviations: 2737638190162.809
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | mean x: 1768251615.5048308
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | mean y: 3328824.3454106282
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | intersect: -220007174698.90927
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | chi2: 34.403429822013386
[2026-01-13 02:36:03] 2026-01-13 00:35:31,972 | INFO     | current chi2=34.403429822013386 (change=5.50623188449246 %)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,973 | INFO     | right removable region: 413
[2026-01-13 02:36:03] 2026-01-13 00:35:31,973 | INFO     | sum of square deviations: 22002735353.490192
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | sum of deviations: 2527865969994.283
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | mean x: 1768251920.5048308
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | mean y: 3342983.1086956523
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | intersect: -203148846251.95193
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | chi2: 33.85104506051556
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | current chi2=33.85104506051556 (change=7.0234328680443046 %)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,974 | INFO     | left removable region: 10
[2026-01-13 02:36:03] 2026-01-13 00:35:31,975 | INFO     | sum of square deviations: 20295073689.990047
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | sum of deviations: 2516303733297.771
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | mean x: 1768251890.0049627
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | mean y: 3354706.6153846155
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | intersect: -219235013194.69913
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | chi2: 31.19392971851451
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | current memory leak: 123.99 B/s (using 403 data points, chi2=31.19)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,976 | INFO     | could have reported an average CPU frequency of 4289 MHz (18 samples)
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | ..............................
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . Timing measurements:
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . get job = 0 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . initial setup = 1 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . payload setup = 4 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . stage-in = 0 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . payload execution = 25502 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . stage-out = 1 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | . log creation = 0 s
[2026-01-13 02:36:03] 2026-01-13 00:35:31,977 | INFO     | ..............................
[2026-01-13 02:36:03] 2026-01-13 00:35:32,007 | INFO     | 
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | job summary report
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | --------------------------------------------------
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | PanDA job id: 6966840805
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | task id: 48187943
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | errors: (none)
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | pilot state: finished 
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | transexitcode: 0
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | exeerrorcode: 0
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | exeerrordiag: 
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | exitcode: 0
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | exitmsg: OK
[2026-01-13 02:36:03] 2026-01-13 00:35:32,008 | INFO     | cpuconsumptiontime: 100059 s
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | nevents: 2050
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | neventsw: 0
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | pid: 4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | pgrp: 4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | corecount: 4
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | event service: False
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | sizes: {0: 2286981, 2: 2287275, 11: 2287303, 25510: 2343358, 25511: 2343357, 25514: 2351299, 25515: 2351483, 25520: 2351729}
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | --------------------------------------------------
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | 
[2026-01-13 02:36:03] 2026-01-13 00:35:32,009 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-13 02:36:03] 2026-01-13 00:35:32,018 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,018 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | job 6966840805 has completed (purged errors)
[2026-01-13 02:36:03] 2026-01-13 00:35:32,019 | INFO     | overall cleanup function is called
[2026-01-13 02:36:03] 2026-01-13 00:35:33,029 | INFO     | --- collectZombieJob: --- 10, [4114534]
[2026-01-13 02:36:03] 2026-01-13 00:35:33,029 | INFO     | zombie collector waiting for pid 4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:33,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 02:36:03] 2026-01-13 00:35:33,029 | INFO     | collected zombie processes
[2026-01-13 02:36:03] 2026-01-13 00:35:33,029 | INFO     | will attempt to kill all subprocesses of pid=4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:33,137 | INFO     | process IDs to be killed: [4114534] (in reverse order)
[2026-01-13 02:36:03] 2026-01-13 00:35:33,175 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 02:36:03] 2026-01-13 00:35:33,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 02:36:03] 2026-01-13 00:35:33,178 | INFO     | did not find any defunct processes belonging to 4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:33,181 | INFO     | did not find any defunct processes belonging to 4114534
[2026-01-13 02:36:03] 2026-01-13 00:35:33,181 | INFO     | ready for new job
[2026-01-13 02:36:03] 2026-01-13 00:35:33,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 02:36:03] 2026-01-13 00:35:33,182 | INFO     | ***************************************
[2026-01-13 02:36:03] 2026-01-13 00:35:33,182 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 02:36:03] 2026-01-13 00:35:33,182 | INFO     | ***************************************
[2026-01-13 02:36:03] 2026-01-13 00:35:33,182 | INFO     | 
[2026-01-13 02:36:03] 2026-01-13 00:35:33,183 | INFO     | architecture information:
[2026-01-13 02:36:03] 2026-01-13 00:35:33,183 | INFO     | executing command: cat /etc/os-release
[2026-01-13 02:36:03] 2026-01-13 00:35:33,191 | INFO     | cat /etc/os-release:
[2026-01-13 02:36:03] NAME="CentOS Linux"
[2026-01-13 02:36:03] VERSION="7 (Core)"
[2026-01-13 02:36:03] ID="centos"
[2026-01-13 02:36:03] ID_LIKE="rhel fedora"
[2026-01-13 02:36:03] VERSION_ID="7"
[2026-01-13 02:36:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:36:03] ANSI_COLOR="0;31"
[2026-01-13 02:36:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:36:03] HOME_URL="https://www.centos.org/"
[2026-01-13 02:36:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:36:03] 
[2026-01-13 02:36:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:36:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:36:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:36:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:36:03] 
[2026-01-13 02:36:03] 2026-01-13 00:35:33,191 | INFO     | ***************************************
[2026-01-13 02:36:03] 2026-01-13 00:35:33,694 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | INFO     | sufficient remaining disk space (46243250176 B)
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | INFO     | update_server=False
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:36:03] 2026-01-13 00:35:33,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:36:03] 2026-01-13 00:35:33,803 | INFO     | all data control threads have been joined
[2026-01-13 02:36:03] 2026-01-13 00:35:34,180 | INFO     | all job control threads have been joined
[2026-01-13 02:36:03] 2026-01-13 00:35:34,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:36:03] 2026-01-13 00:35:34,277 | INFO     | aborting loop
[2026-01-13 02:36:03] 2026-01-13 00:35:34,706 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:34,706 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:34,808 | INFO     | [data] control thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,001 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,006 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,007 | INFO     | [job] validate thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,023 | INFO     | all payload control threads have been joined
[2026-01-13 02:36:03] 2026-01-13 00:35:35,180 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,185 | INFO     | [job] control thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,282 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,660 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:35,706 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:36,028 | INFO     | [payload] control thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:36,066 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:36,188 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:37,707 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:36:03] 2026-01-13 00:35:39,774 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:36:03] 2026-01-13 00:35:41,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288673285952)>', '<ExcThread(monitor, started 140288043505408)>']
[2026-01-13 02:36:03] 2026-01-13 00:35:46,585 | INFO     | all workflow threads have been joined
[2026-01-13 02:36:03] 2026-01-13 00:35:46,585 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:36:03] 2026-01-13 00:35:46,586 | INFO     | traces error code: 0
[2026-01-13 02:36:03] 2026-01-13 00:35:46,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | INFO     | PID=4092591 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:36:03] 2026-01-13 00:36:03,725 | INFO     | [monitor] control thread has ended
[2026-01-13 02:36:03] 2026-01-13 00:36:03,802 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:36:03] 2026-01-13 00:36:03,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:36:03] 2026-01-13 00:36:03,806 [wrapper] pilotpid: 4092591
[2026-01-13 02:36:03] 2026-01-13 00:36:03,808 [wrapper] Pilot exit status: 0
[2026-01-13 02:36:03] 2026-01-13 00:36:03,816 [wrapper] pandaids: 6966840805
[2026-01-13 02:36:03] 2026-01-13 00:36:03,839 [wrapper] cleanup supervisor_pilot 2784928 4092592
[2026-01-13 02:36:03] 2026-01-13 00:36:03,841 [wrapper] Test setup, not cleaning
[2026-01-13 02:36:03] 2026-01-13 00:36:03,844 [wrapper] apfmon messages muted
[2026-01-13 02:36:03] 2026-01-13 00:36:03,846 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:36:03] 2026-01-13 00:36:03,848 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:36:03]  *** Error codes and diagnostics ***
[2026-01-13 02:36:03]     "exeErrorCode": 0,
[2026-01-13 02:36:03]     "exeErrorDiag": "",
[2026-01-13 02:36:03]     "pilotErrorCode": 0,
[2026-01-13 02:36:03]     "pilotErrorDiag": "",
[2026-01-13 02:36:03]  *** Listing of results directory ***
[2026-01-13 02:36:03] total 1810640
[2026-01-13 02:36:03] -rw-r--r-- 1 ek ek     579449 Jan 12 10:42 pilot3.tar.gz
[2026-01-13 02:36:03] -rw-r--r-- 1 ek ek       5112 Jan 12 10:43 queuedata.json
[2026-01-13 02:36:03] -rwx------ 1 ek ek      36322 Jan 12 10:43 runpilot2-wrapper.sh
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek        100 Jan 12 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:36:03] -rwxr-xr-x 1 ek ek       7986 Jan 12 19:29 run_atlas
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek        105 Jan 12 19:29 job.xml
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek  322413849 Jan 12 19:29 EVNT.48118027._000038.pool.root.1
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek  325134323 Jan 12 19:29 EVNT.48118027._000039.pool.root.1
[2026-01-13 02:36:03] drwxrwx--x 2 ek ek       4096 Jan 12 19:29 shared
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek     592698 Jan 12 19:29 input.tar.gz
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek      15897 Jan 12 19:29 start_atlas.sh
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek          0 Jan 12 19:29 boinc_setup_complete
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek       9841 Jan 12 19:29 init_data.xml
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek          0 Jan 12 19:29 boinc_lockfile
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek       3434 Jan 12 19:29 pandaJob.out
[2026-01-13 02:36:03] -rw------- 1 ek ek         50 Jan 12 19:29 setup.sh.local
[2026-01-13 02:36:03] -rw------- 1 ek ek     988539 Jan 12 19:29 agis_schedconf.cvmfs.json
[2026-01-13 02:36:03] drwx------ 5 ek ek       4096 Jan 12 19:29 pilot3
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek        533 Jan 13 02:32 boinc_task_state.xml
[2026-01-13 02:36:03] -rw------- 1 ek ek 1192417928 Jan 13 02:35 HITS.48187943._000186.pool.root.1
[2026-01-13 02:36:03] -rw------- 1 ek ek         95 Jan 13 02:35 pilot_heartbeat.json
[2026-01-13 02:36:03] -rw------- 1 ek ek       1057 Jan 13 02:35 memory_monitor_summary.json
[2026-01-13 02:36:03] -rw------- 1 ek ek    1516240 Jan 13 02:35 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:36:03] -rw------- 1 ek ek    1512244 Jan 13 02:35 log.48187943._000186.job.log.tgz.1
[2026-01-13 02:36:03] -rw------- 1 ek ek      27216 Jan 13 02:35 heartbeat.json
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek       8192 Jan 13 02:35 boinc_mmap_file
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek         29 Jan 13 02:35 wrapper_checkpoint.txt
[2026-01-13 02:36:03] -rw------- 1 ek ek        747 Jan 13 02:36 pilotlog.txt
[2026-01-13 02:36:03] -rw------- 1 ek ek    3568407 Jan 13 02:36 log.48187943._000186.job.log.1
[2026-01-13 02:36:03] -rw------- 1 ek ek        353 Jan 13 02:36 output.list
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek        620 Jan 13 02:36 runtime_log
[2026-01-13 02:36:03] -rw------- 1 ek ek    5120000 Jan 13 02:36 result.tar.gz
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek       9555 Jan 13 02:36 runtime_log.err
[2026-01-13 02:36:03] -rw------- 1 ek ek        675 Jan 13 02:36 OzENDmwhSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma6mKDmP2MEXn.diag
[2026-01-13 02:36:03] -rw-rw-r-- 1 ek ek      21511 Jan 13 02:36 stderr.txt
[2026-01-13 02:36:03] HITS file was successfully produced:
[2026-01-13 02:36:03] -rw------- 1 ek ek 1192417928 Jan 13 02:35 shared/HITS.pool.root.1
[2026-01-13 02:36:03]  *** Contents of shared directory: ***
[2026-01-13 02:36:03] total 1802456
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek  322413849 Jan 12 19:29 ATLAS.root_0
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek  325134323 Jan 12 19:29 ATLAS.root_1
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek     592698 Jan 12 19:29 input.tar.gz
[2026-01-13 02:36:03] -rw-r--r-- 2 ek ek      15897 Jan 12 19:29 start_atlas.sh
[2026-01-13 02:36:03] -rw------- 1 ek ek 1192417928 Jan 13 02:35 HITS.pool.root.1
[2026-01-13 02:36:03] -rw------- 1 ek ek    5120000 Jan 13 02:36 result.tar.gz
02:36:05 (4084715): run_atlas exited; CPU time 100189.389994
02:36:05 (4084715): called boinc_finish(0)

</stderr_txt>
]]>

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