Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:24:15 (8375): wrapper (7.7.26015): starting
11:24:15 (8375): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 11:24:15] Arguments: --nthreads 12
[2026-01-12 11:24:15] Threads: 12
[2026-01-12 11:24:15] Checking for CVMFS
[2026-01-12 11:24:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 11:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 11:24:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 11:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 11:24:23] 2.13.3.0 8586 0 25520 155049 3 1 3984982 4096001 0 130560 0 0 0.000 1335 429 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-12 11:24:23] CVMFS is ok
[2026-01-12 11:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 11:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 11:24:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-12 11:24:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-12 11:24:23] Further information can be found at the LHC@home message board.
[2026-01-12 11:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 11:24:23] Checking for apptainer binary...
[2026-01-12 11:24:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 11:24:23] Running /usr/bin/apptainer --version
[2026-01-12 11:24:23] apptainer version 1.4.5
[2026-01-12 11:24:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 11:24:23] perseverance
[2026-01-12 11:24:23] apptainer works
[2026-01-12 11:24:23] Set ATHENA_PROC_NUMBER=12
[2026-01-12 11:24:23] Set ATHENA_CORE_NUMBER=12
[2026-01-12 11:24:23] Starting ATLAS job with PandaID=6966861780
[2026-01-12 11:24:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:09:53 (48258): wrapper (7.7.26015): starting
15:09:53 (48258): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 15:09:53] Arguments: --nthreads 12
[2026-01-12 15:09:53] Threads: 12
[2026-01-12 15:09:53] This job has been restarted, cleaning up previous attempt
[2026-01-12 15:09:53] Checking for CVMFS
[2026-01-12 15:09:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 15:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 15:09:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 15:09:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 15:09:55] 2.13.3.0 8586 225 43436 155054 2 64 2879554 4096001 0 130560 0 116336 96.067 330641 558 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-12 15:09:55] CVMFS is ok
[2026-01-12 15:09:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 15:09:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 15:09:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-12 15:09:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-12 15:09:55] Further information can be found at the LHC@home message board.
[2026-01-12 15:09:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 15:09:55] Checking for apptainer binary...
[2026-01-12 15:09:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 15:09:55] Running /usr/bin/apptainer --version
[2026-01-12 15:09:55] apptainer version 1.4.5
[2026-01-12 15:09:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 15:09:55] perseverance
[2026-01-12 15:09:55] apptainer works
[2026-01-12 15:09:55] Set ATHENA_PROC_NUMBER=12
[2026-01-12 15:09:55] Set ATHENA_CORE_NUMBER=12
[2026-01-12 15:09:55] Starting ATLAS job with PandaID=6966861780
[2026-01-12 15:09:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 19:25:50]  *** The last 200 lines of the pilot log: ***
[2026-01-12 19:25:50] 2026-01-12 18:25:15,829 | INFO     | PID=52332 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 19:25:50] 2026-01-12 18:25:16,312 | INFO     | monitor loop #1152: job 0:6966861780 is in state 'finished'
[2026-01-12 19:25:50] 2026-01-12 18:25:16,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 19:25:50] 2026-01-12 18:25:16,830 | INFO     | time since job start (15313s) is within the limit (349056.0s)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,912 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 19:25:50] 2026-01-12 18:25:17,913 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3625.5429166666668
[2026-01-12 19:25:50] 2026-01-12 18:25:17,914 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-6966861780/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,914 | INFO     | extracted standard info from prmon json
[2026-01-12 19:25:50] 2026-01-12 18:25:17,914 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 19:25:50] 2026-01-12 18:25:17,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 19:25:50] 2026-01-12 18:25:17,916 | INFO     | fitting pss+swap vs Time
[2026-01-12 19:25:50] 2026-01-12 18:25:17,916 | INFO     | sum of square deviations: 4903296816.31072
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | sum of deviations: 176125377233.71313
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | mean x: 1768234647.4581673
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | mean y: 4158516.115537849
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | intersect: -63510453384.457634
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | chi2: 3.2065891949101486
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | sum of square deviations: 4616068341.593464
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | sum of deviations: 236640115937.98364
[2026-01-12 19:25:50] 2026-01-12 18:25:17,917 | INFO     | mean x: 1768234494.9593496
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | mean y: 4190296.398373984
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | intersect: -90643344559.69928
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | chi2: 1.59994343483887
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | current chi2=1.59994343483887 (change=50.104508635578384 %)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | sum of square deviations: 4340266935.792515
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | sum of deviations: 228074616351.54373
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | mean x: 1768234342.4564316
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | mean y: 4185558.004149378
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | intersect: -92913917231.85016
[2026-01-12 19:25:50] 2026-01-12 18:25:17,918 | INFO     | chi2: 1.5972136221207092
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | current chi2=1.5972136221207092 (change=0.1706193268286182 %)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | right removable region: 240
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | sum of square deviations: 4616058947.593464
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | sum of deviations: 106440888785.60968
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | mean x: 1768234799.9593496
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | mean y: 4195206.060975609
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | intersect: -40769219047.55045
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | chi2: 1.6910373560049798
[2026-01-12 19:25:50] 2026-01-12 18:25:17,919 | INFO     | current chi2=1.6910373560049798 (change=47.26367322982375 %)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | sum of square deviations: 4340293287.70126
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | sum of deviations: 88492104699.5685
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | mean x: 1768234952.4522822
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | mean y: 4205129.875518672
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | intersect: -36047467458.52629
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | chi2: 1.6694014435760842
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | current chi2=1.6694014435760842 (change=1.2794461548744112 %)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | left removable region: 20
[2026-01-12 19:25:50] 2026-01-12 18:25:17,920 | INFO     | sum of square deviations: 3301648478.6318107
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | sum of deviations: 112066746591.3091
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | mean x: 1768234921.959091
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | mean y: 4252958.1454545455
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | intersect: -60014351746.619934
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | chi2: 0.017872425431538934
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | current memory leak: 33.94 B/s (using 220 data points, chi2=0.02)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | could have reported an average CPU frequency of 4084 MHz (12 samples)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | ..............................
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . Timing measurements:
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . get job = 0 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . initial setup = 1 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . payload setup = 3 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . stage-in = 0 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . payload execution = 15287 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . stage-out = 1 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | . log creation = 0 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,921 | INFO     | ..............................
[2026-01-12 19:25:50] 2026-01-12 18:25:17,949 | INFO     | 
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | job summary report
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | --------------------------------------------------
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | PanDA job id: 6966861780
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | task id: 48187943
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | errors: (none)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | pilot state: finished 
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | transexitcode: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | exeerrorcode: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | exeerrordiag: 
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | exitcode: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | exitmsg: OK
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | cpuconsumptiontime: 173405 s
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | nevents: 2050
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | neventsw: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | pid: 59431
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | pgrp: 59431
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | corecount: 12
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | event service: False
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | sizes: {0: 2284630, 2: 2284892, 11: 2284920, 15294: 2336591, 15296: 2345603, 15297: 2345659, 15302: 2346033}
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | --------------------------------------------------
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | 
[2026-01-12 19:25:50] 2026-01-12 18:25:17,950 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | job 6966861780 has completed (purged errors)
[2026-01-12 19:25:50] 2026-01-12 18:25:17,961 | INFO     | overall cleanup function is called
[2026-01-12 19:25:50] 2026-01-12 18:25:18,972 | INFO     | --- collectZombieJob: --- 10, [59431]
[2026-01-12 19:25:50] 2026-01-12 18:25:18,972 | INFO     | zombie collector waiting for pid 59431
[2026-01-12 19:25:50] 2026-01-12 18:25:18,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 19:25:50] 2026-01-12 18:25:18,972 | INFO     | collected zombie processes
[2026-01-12 19:25:50] 2026-01-12 18:25:18,972 | INFO     | will attempt to kill all subprocesses of pid=59431
[2026-01-12 19:25:50] 2026-01-12 18:25:19,006 | INFO     | process IDs to be killed: [59431] (in reverse order)
[2026-01-12 19:25:50] 2026-01-12 18:25:19,023 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 19:25:50] 2026-01-12 18:25:19,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 19:25:50] 2026-01-12 18:25:19,024 | INFO     | did not find any defunct processes belonging to 59431
[2026-01-12 19:25:50] 2026-01-12 18:25:19,025 | INFO     | did not find any defunct processes belonging to 59431
[2026-01-12 19:25:50] 2026-01-12 18:25:19,025 | INFO     | ready for new job
[2026-01-12 19:25:50] 2026-01-12 18:25:19,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 19:25:50] 2026-01-12 18:25:19,026 | INFO     | ***************************************
[2026-01-12 19:25:50] 2026-01-12 18:25:19,026 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 19:25:50] 2026-01-12 18:25:19,026 | INFO     | ***************************************
[2026-01-12 19:25:50] 2026-01-12 18:25:19,026 | INFO     | 
[2026-01-12 19:25:50] 2026-01-12 18:25:19,026 | INFO     | architecture information:
[2026-01-12 19:25:50] 2026-01-12 18:25:19,027 | INFO     | executing command: cat /etc/os-release
[2026-01-12 19:25:50] 2026-01-12 18:25:19,033 | INFO     | cat /etc/os-release:
[2026-01-12 19:25:50] NAME="CentOS Linux"
[2026-01-12 19:25:50] VERSION="7 (Core)"
[2026-01-12 19:25:50] ID="centos"
[2026-01-12 19:25:50] ID_LIKE="rhel fedora"
[2026-01-12 19:25:50] VERSION_ID="7"
[2026-01-12 19:25:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 19:25:50] ANSI_COLOR="0;31"
[2026-01-12 19:25:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 19:25:50] HOME_URL="https://www.centos.org/"
[2026-01-12 19:25:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 19:25:50] 
[2026-01-12 19:25:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 19:25:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 19:25:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 19:25:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 19:25:50] 
[2026-01-12 19:25:50] 2026-01-12 18:25:19,033 | INFO     | ***************************************
[2026-01-12 19:25:50] 2026-01-12 18:25:19,536 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-01-12 19:25:50] 2026-01-12 18:25:19,542 | INFO     | sufficient remaining disk space (147931004928 B)
[2026-01-12 19:25:50] 2026-01-12 18:25:19,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 19:25:50] 2026-01-12 18:25:19,543 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 19:25:50] 2026-01-12 18:25:19,543 | INFO     | update_server=False
[2026-01-12 19:25:50] 2026-01-12 18:25:19,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 19:25:50] 2026-01-12 18:25:19,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:25:50] 2026-01-12 18:25:19,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 19:25:50] 2026-01-12 18:25:19,793 | INFO     | all payload control threads have been joined
[2026-01-12 19:25:50] 2026-01-12 18:25:19,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:25:50] 2026-01-12 18:25:19,820 | INFO     | aborting loop
[2026-01-12 19:25:50] 2026-01-12 18:25:20,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 19:25:50] 2026-01-12 18:25:20,320 | INFO     | all data control threads have been joined
[2026-01-12 19:25:50] 2026-01-12 18:25:20,547 | INFO     | [job] queue monitor thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:20,547 | INFO     | [job] retrieve thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:20,799 | INFO     | [payload] control thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:20,825 | INFO     | [job] job monitor thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:20,924 | INFO     | all job control threads have been joined
[2026-01-12 19:25:50] 2026-01-12 18:25:21,092 | INFO     | [payload] validate_post thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,325 | INFO     | [data] control thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,377 | INFO     | [payload] failed_post thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,404 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,428 | INFO     | [job] validate thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,621 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,863 | INFO     | [data] copytool_in thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,927 | INFO     | [job] control thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:21,972 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:22,209 | INFO     | [data] copytool_out thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:23,548 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:28,495 | INFO     | [monitor] cgroup control has ended
[2026-01-12 19:25:50] 2026-01-12 18:25:29,812 | INFO     | job.realtimelogging is not enabled
[2026-01-12 19:25:50] 2026-01-12 18:25:30,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 19:25:50] 2026-01-12 18:25:31,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130855393560384)>', '<ExcThread(monitor, started 130854768604928)>']
[2026-01-12 19:25:50] 2026-01-12 18:25:36,636 | INFO     | all workflow threads have been joined
[2026-01-12 19:25:50] 2026-01-12 18:25:36,636 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 19:25:50] 2026-01-12 18:25:36,636 | INFO     | traces error code: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:36,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 19:25:50] 2026-01-12 18:25:49,936 | INFO     | PID=52332 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 19:25:50] 2026-01-12 18:25:49,937 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 19:25:50] 2026-01-12 18:25:49,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 19:25:50] 2026-01-12 18:25:49,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 19:25:50] 2026-01-12 18:25:49,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 19:25:50] 2026-01-12 18:25:49,937 | INFO     | [monitor] control thread has ended
[2026-01-12 19:25:50] 2026-01-12 18:25:49,972 [wrapper] ==== pilot stdout END ====
[2026-01-12 19:25:50] 2026-01-12 18:25:49,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 19:25:50] 2026-01-12 18:25:49,975 [wrapper] pilotpid: 52332
[2026-01-12 19:25:50] 2026-01-12 18:25:49,977 [wrapper] Pilot exit status: 0
[2026-01-12 19:25:50] 2026-01-12 18:25:49,981 [wrapper] pandaids: 6966861780 6966861780
[2026-01-12 19:25:50] 2026-01-12 18:25:49,992 [wrapper] cleanup supervisor_pilot   88386 52333
[2026-01-12 19:25:50] 2026-01-12 18:25:49,993 [wrapper] Test setup, not cleaning
[2026-01-12 19:25:50] 2026-01-12 18:25:49,995 [wrapper] apfmon messages muted
[2026-01-12 19:25:50] 2026-01-12 18:25:49,996 [wrapper] ==== wrapper stdout END ====
[2026-01-12 19:25:50] 2026-01-12 18:25:49,997 [wrapper] ==== wrapper stderr END ====
[2026-01-12 19:25:50]  *** Error codes and diagnostics ***
[2026-01-12 19:25:50]     "exeErrorCode": 0,
[2026-01-12 19:25:50]     "exeErrorDiag": "",
[2026-01-12 19:25:50]     "pilotErrorCode": 0,
[2026-01-12 19:25:50]     "pilotErrorDiag": "",
[2026-01-12 19:25:50]  *** Listing of results directory ***
[2026-01-12 19:25:50] total 1797852
[2026-01-12 19:25:50] drwx------ 5 boinc boinc       4096 dic  3 15:30 pilot3
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc     579449 ene 12 09:50 pilot3.tar.gz
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc       5112 ene 12 09:58 queuedata.json
[2026-01-12 19:25:50] -rwx------ 1 boinc boinc      36322 ene 12 09:58 runpilot2-wrapper.sh
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc        100 ene 12 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 19:25:50] -rwxr-xr-x 1 boinc boinc       7986 ene 12 11:24 run_atlas
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc        105 ene 12 11:24 job.xml
[2026-01-12 19:25:50] -rw-r--r-- 3 boinc boinc  320417145 ene 12 11:24 EVNT.48118027._000249.pool.root.1
[2026-01-12 19:25:50] -rw-r--r-- 3 boinc boinc  320417145 ene 12 11:24 ATLAS.root_0
[2026-01-12 19:25:50] drwxrwx--x 2 boinc boinc       4096 ene 12 11:24 shared
[2026-01-12 19:25:50] -rw-r--r-- 2 boinc boinc     592608 ene 12 11:24 input.tar.gz
[2026-01-12 19:25:50] -rw-r--r-- 2 boinc boinc      15847 ene 12 11:24 start_atlas.sh
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc          0 ene 12 11:24 boinc_setup_complete
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc          0 ene 12 11:24 boinc_lockfile
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc       8985 ene 12 15:09 init_data.xml
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc       2897 ene 12 15:09 pandaJob.out
[2026-01-12 19:25:50] -rw------- 1 boinc boinc     986112 ene 12 15:10 agis_schedconf.cvmfs.json
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc        533 ene 12 19:21 boinc_task_state.xml
[2026-01-12 19:25:50] -rw------- 1 boinc boinc 1187153273 ene 12 19:24 HITS.48187943._001212.pool.root.1
[2026-01-12 19:25:50] -rw------- 1 boinc boinc       1024 ene 12 19:25 memory_monitor_summary.json
[2026-01-12 19:25:50] -rw------- 1 boinc boinc    1516240 ene 12 19:25 agis_ddmendpoints.agis.ALL.json
[2026-01-12 19:25:50] -rw------- 1 boinc boinc    2341119 ene 12 19:25 log.48187943._001212.job.log.tgz.1
[2026-01-12 19:25:50] -rw------- 1 boinc boinc         96 ene 12 19:25 pilot_heartbeat.json
[2026-01-12 19:25:50] -rw------- 1 boinc boinc      28034 ene 12 19:25 heartbeat.json
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc         29 ene 12 19:25 wrapper_checkpoint.txt
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc       8192 ene 12 19:25 boinc_mmap_file
[2026-01-12 19:25:50] -rw------- 1 boinc boinc        745 ene 12 19:25 pilotlog.txt
[2026-01-12 19:25:50] -rw------- 1 boinc boinc    2190137 ene 12 19:25 log.48187943._001212.job.log.1
[2026-01-12 19:25:50] -rw------- 1 boinc boinc        353 ene 12 19:25 output.list
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc        620 ene 12 19:25 runtime_log
[2026-01-12 19:25:50] -rw------- 1 boinc boinc    4567040 ene 12 19:25 result.tar.gz
[2026-01-12 19:25:50] -rw------- 1 boinc boinc        789 ene 12 19:25 rXBODm4vSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhohKDmPsdGLo.diag
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc       9003 ene 12 19:25 runtime_log.err
[2026-01-12 19:25:50] -rw-r--r-- 1 boinc boinc      23801 ene 12 19:25 stderr.txt
[2026-01-12 19:25:50] HITS file was successfully produced:
[2026-01-12 19:25:50] -rw------- 1 boinc boinc 1187153273 ene 12 19:24 shared/HITS.pool.root.1
[2026-01-12 19:25:50]  *** Contents of shared directory: ***
[2026-01-12 19:25:50] total 1477304
[2026-01-12 19:25:50] -rw-r--r-- 3 boinc boinc  320417145 ene 12 11:24 ATLAS.root_0
[2026-01-12 19:25:50] -rw-r--r-- 2 boinc boinc     592608 ene 12 11:24 input.tar.gz
[2026-01-12 19:25:50] -rw-r--r-- 2 boinc boinc      15847 ene 12 11:24 start_atlas.sh
[2026-01-12 19:25:50] -rw------- 1 boinc boinc 1187153273 ene 12 19:24 HITS.pool.root.1
[2026-01-12 19:25:50] -rw------- 1 boinc boinc    4567040 ene 12 19:25 result.tar.gz
19:25:51 (48258): run_atlas exited; CPU time 172278.218229
19:25:51 (48258): called boinc_finish(0)

</stderr_txt>
]]>

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