Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:57:48 (784059): wrapper (7.7.26015): starting
05:57:48 (784059): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 05:57:48] Arguments: --nthreads 8
[2026-01-12 05:57:48] Threads: 8
[2026-01-12 05:57:48] Checking for CVMFS
[2026-01-12 05:57:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 05:57:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 05:57:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 05:57:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 05:57:50] 2.13.3.0 7554 27107 225372 155049 2 332 29554577 40960001 22136 16776704 0 55002919 99.626 51811002 39834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 05:57:50] CVMFS is ok
[2026-01-12 05:57:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 05:57:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 05:57:50] Further information can be found at the LHC@home message board.
[2026-01-12 05:57:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 05:57:50] Checking for apptainer binary...
[2026-01-12 05:57:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 05:57:50] Running /usr/bin/apptainer --version
[2026-01-12 05:57:50] apptainer version 1.4.5-2.el9
[2026-01-12 05:57:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 05:57:50] c-212-7.aglt2.org
[2026-01-12 05:57:50] apptainer works
[2026-01-12 05:57:50] Set ATHENA_PROC_NUMBER=8
[2026-01-12 05:57:50] Set ATHENA_CORE_NUMBER=8
[2026-01-12 05:57:50] Starting ATLAS job with PandaID=6966868785
[2026-01-12 05:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:13:35]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:13:35] 2026-01-13 04:04:23,091 | INFO     | time since job start (61553s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:23,806 | INFO     | monitor loop #3551: job 0:6966868785 is in state 'finished'
[2026-01-12 23:13:35] 2026-01-13 04:04:23,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:13:35] 2026-01-13 04:04:26,391 | INFO     | PID=789924 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 23:13:35] 2026-01-13 04:04:26,391 | INFO     | .. there are 25 such processes running
[2026-01-12 23:13:35] 2026-01-13 04:04:26,458 | INFO     | monitor loop #3552: job 0:6966868785 is in state 'finished'
[2026-01-12 23:13:35] 2026-01-13 04:04:26,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:13:35] 2026-01-13 04:04:27,406 | INFO     | time since job start (61557s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:28,964 | INFO     | monitor loop #3553: job 0:6966868785 is in state 'finished'
[2026-01-12 23:13:35] 2026-01-13 04:04:28,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:13:35] 2026-01-13 04:04:29,421 | INFO     | time since job start (61559s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:31,434 | INFO     | time since job start (61561s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:31,491 | INFO     | monitor loop #3554: job 0:6966868785 is in state 'finished'
[2026-01-12 23:13:35] 2026-01-13 04:04:31,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:13:35] 2026-01-13 04:04:33,443 | INFO     | time since job start (61563s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:34,010 | INFO     | monitor loop #3555: job 0:6966868785 is in state 'finished'
[2026-01-12 23:13:35] 2026-01-13 04:04:34,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:13:35] 2026-01-13 04:04:34,533 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 23:13:35] 2026-01-13 04:04:34,540 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3195.3119791666663
[2026-01-12 23:13:35] 2026-01-13 04:04:34,554 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6966868785/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 23:13:35] 2026-01-13 04:04:34,555 | INFO     | extracted standard info from prmon json
[2026-01-12 23:13:35] 2026-01-13 04:04:34,555 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 23:13:35] 2026-01-13 04:04:34,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 23:13:35] 2026-01-13 04:04:34,619 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:13:35] 2026-01-13 04:04:34,644 | INFO     | sum of square deviations: 316637971799.3225
[2026-01-12 23:13:35] 2026-01-13 04:04:34,774 | INFO     | sum of deviations: 1686843404438.008
[2026-01-12 23:13:35] 2026-01-13 04:04:34,774 | INFO     | mean x: 1768246316.91857
[2026-01-12 23:13:35] 2026-01-13 04:04:34,775 | INFO     | mean y: 3380112.731876862
[2026-01-12 23:13:35] 2026-01-13 04:04:34,775 | INFO     | intersect: -9416698661.036568
[2026-01-12 23:13:35] 2026-01-13 04:04:34,775 | INFO     | chi2: 15.314881772882918
[2026-01-12 23:13:35] 2026-01-13 04:04:34,800 | INFO     | sum of square deviations: 311945040342.5826
[2026-01-12 23:13:35] 2026-01-13 04:04:34,892 | INFO     | sum of deviations: 2076537736000.2637
[2026-01-12 23:13:35] 2026-01-13 04:04:34,892 | INFO     | mean x: 1768246164.4231536
[2026-01-12 23:13:35] 2026-01-13 04:04:34,892 | INFO     | mean y: 3392775.0489021954
[2026-01-12 23:13:35] 2026-01-13 04:04:34,908 | INFO     | intersect: -11767366211.630123
[2026-01-12 23:13:35] 2026-01-13 04:04:34,909 | INFO     | chi2: 12.236390794967466
[2026-01-12 23:13:35] 2026-01-13 04:04:34,909 | INFO     | current chi2=12.236390794967466 (change=20.10130423185074 %)
[2026-01-12 23:13:35] 2026-01-13 04:04:34,909 | INFO     | right removable region: 1001
[2026-01-12 23:13:35] 2026-01-13 04:04:34,910 | INFO     | sum of square deviations: 311944476092.5825
[2026-01-12 23:13:35] 2026-01-13 04:04:35,004 | INFO     | sum of deviations: 1236229637791.7742
[2026-01-12 23:13:35] 2026-01-13 04:04:35,004 | INFO     | mean x: 1768246469.4231536
[2026-01-12 23:13:35] 2026-01-13 04:04:35,004 | INFO     | mean y: 3394750.4321357287
[2026-01-12 23:13:35] 2026-01-13 04:04:35,005 | INFO     | intersect: -7004130177.731024
[2026-01-12 23:13:35] 2026-01-13 04:04:35,025 | INFO     | chi2: 11.570877921197543
[2026-01-12 23:13:35] 2026-01-13 04:04:35,026 | INFO     | current chi2=11.570877921197543 (change=24.446834831690598 %)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,026 | INFO     | left removable region: 10
[2026-01-12 23:13:35] 2026-01-13 04:04:35,026 | INFO     | sum of square deviations: 301783186637.604
[2026-01-12 23:13:35] 2026-01-13 04:04:35,141 | INFO     | sum of deviations: 1378900956319.7947
[2026-01-12 23:13:35] 2026-01-13 04:04:35,141 | INFO     | mean x: 1768246438.9334006
[2026-01-12 23:13:35] 2026-01-13 04:04:35,141 | INFO     | mean y: 3420838.072653885
[2026-01-12 23:13:35] 2026-01-13 04:04:35,141 | INFO     | intersect: -8076011064.083948
[2026-01-12 23:13:35] 2026-01-13 04:04:35,142 | INFO     | chi2: 5.643588540980652
[2026-01-12 23:13:35] 2026-01-13 04:04:35,142 | INFO     | current memory leak: 4.57 B/s (using 991 data points, chi2=5.64)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | could have reported an average CPU frequency of 3188 MHz (37 samples)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | ..............................
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | . Timing measurements:
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | . get job = 0 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | . initial setup = 3 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | . payload setup = 44 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,166 | INFO     | . stage-in = 0 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,167 | INFO     | . payload execution = 61421 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,167 | INFO     | . stage-out = 12 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,167 | INFO     | . log creation = 4 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,167 | INFO     | ..............................
[2026-01-12 23:13:35] 2026-01-13 04:04:35,484 | INFO     | time since job start (61565s) is within the limit (349056.0s)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | 
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | job summary report
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | --------------------------------------------------
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | PanDA job id: 6966868785
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | task id: 48187943
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | errors: (none)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | pilot state: finished 
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | transexitcode: 0
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | exeerrorcode: 0
[2026-01-12 23:13:35] 2026-01-13 04:04:35,704 | INFO     | exeerrordiag: 
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | exitcode: 0
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | exitmsg: OK
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | cpuconsumptiontime: 227710 s
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | nevents: 2050
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | neventsw: 0
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | pid: 804250
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | pgrp: 804250
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | corecount: 8
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | event service: False
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | sizes: {0: 2286814, 1: 2287013, 12: 2287013, 23: 2287041, 25: 2287363, 34: 2287391, 61470: 2359918, 61471: 2359917, 61484: 2367859, 61488: 2367915, 61509: 2368161}
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | --------------------------------------------------
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | 
[2026-01-12 23:13:35] 2026-01-13 04:04:35,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-12 23:13:35] 2026-01-13 04:04:35,856 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | job 6966868785 has completed (purged errors)
[2026-01-12 23:13:35] 2026-01-13 04:04:35,858 | INFO     | overall cleanup function is called
[2026-01-12 23:13:35] 2026-01-13 04:04:36,956 | INFO     | --- collectZombieJob: --- 10, [804250]
[2026-01-12 23:13:35] 2026-01-13 04:04:36,956 | INFO     | zombie collector waiting for pid 804250
[2026-01-12 23:13:35] 2026-01-13 04:04:36,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:13:35] 2026-01-13 04:04:36,956 | INFO     | collected zombie processes
[2026-01-12 23:13:35] 2026-01-13 04:04:36,957 | INFO     | will attempt to kill all subprocesses of pid=804250
[2026-01-12 23:13:35] 2026-01-13 04:04:37,881 | INFO     | process IDs to be killed: [804250] (in reverse order)
[2026-01-12 23:13:35] 2026-01-13 04:04:38,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:13:35] 2026-01-13 04:04:38,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:13:35] 2026-01-13 04:04:39,036 | INFO     | did not find any defunct processes belonging to 804250
[2026-01-12 23:13:35] 2026-01-13 04:04:39,152 | INFO     | did not find any defunct processes belonging to 804250
[2026-01-12 23:13:35] 2026-01-13 04:04:39,153 | INFO     | ready for new job
[2026-01-12 23:13:35] 2026-01-13 04:04:39,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:13:35] 2026-01-13 04:04:39,212 | INFO     | ***************************************
[2026-01-12 23:13:35] 2026-01-13 04:04:39,212 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:13:35] 2026-01-13 04:04:39,213 | INFO     | ***************************************
[2026-01-12 23:13:35] 2026-01-13 04:04:39,213 | INFO     | 
[2026-01-12 23:13:35] 2026-01-13 04:04:39,234 | INFO     | architecture information:
[2026-01-12 23:13:35] 2026-01-13 04:04:39,260 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:13:35] 2026-01-13 04:04:39,350 | INFO     | cat /etc/os-release:
[2026-01-12 23:13:35] NAME="CentOS Linux"
[2026-01-12 23:13:35] VERSION="7 (Core)"
[2026-01-12 23:13:35] ID="centos"
[2026-01-12 23:13:35] ID_LIKE="rhel fedora"
[2026-01-12 23:13:35] VERSION_ID="7"
[2026-01-12 23:13:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:13:35] ANSI_COLOR="0;31"
[2026-01-12 23:13:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:13:35] HOME_URL="https://www.centos.org/"
[2026-01-12 23:13:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:13:35] 
[2026-01-12 23:13:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:13:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:13:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:13:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:13:35] 
[2026-01-12 23:13:35] 2026-01-13 04:04:39,351 | INFO     | ***************************************
[2026-01-12 23:13:35] 2026-01-13 04:04:39,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-12 23:13:35] 2026-01-13 04:04:40,015 | INFO     | sufficient remaining disk space (120649154560 B)
[2026-01-12 23:13:35] 2026-01-13 04:04:40,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:13:35] 2026-01-13 04:04:40,016 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:13:35] 2026-01-13 04:04:40,016 | INFO     | update_server=False
[2026-01-12 23:13:35] 2026-01-13 04:04:40,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:13:35] 2026-01-13 04:04:40,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:13:35] 2026-01-13 04:04:40,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:13:35] 2026-01-13 04:04:40,031 | INFO     | all payload control threads have been joined
[2026-01-12 23:13:35] 2026-01-13 04:04:40,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:13:35] 2026-01-13 04:04:40,056 | INFO     | aborting loop
[2026-01-12 23:13:35] 2026-01-13 04:04:40,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:13:35] 2026-01-13 04:04:40,854 | INFO     | all job control threads have been joined
[2026-01-12 23:13:35] 2026-01-13 04:04:40,992 | INFO     | all data control threads have been joined
[2026-01-12 23:13:35] 2026-01-13 04:04:41,032 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,037 | INFO     | [payload] control thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,051 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,067 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,075 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,080 | INFO     | [job] validate thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,164 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,357 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,619 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,754 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,860 | INFO     | [job] control thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:41,998 | INFO     | [data] control thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:42,041 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:42,385 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:04:44,044 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:13:35] 2026-01-13 04:05:11,894 | INFO     | PID=789924 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 23:13:35] 2026-01-13 04:05:11,895 | INFO     | .. there are 25 such processes running
[2026-01-12 23:13:35] 2026-01-13 04:05:11,895 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:13:35] 2026-01-13 04:05:11,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:13:35] 2026-01-13 04:05:11,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:13:35] 2026-01-13 04:05:20,996 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:13:35] 2026-01-13 04:05:21,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091737294656)>', '<ExcThread(monitor, started 140091380963072)>']
[2026-01-12 23:13:35] 2026-01-13 04:05:21,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:13:35] 2026-01-13 04:05:21,973 | INFO     | [monitor] control thread has ended
[2026-01-12 23:13:35] 2026-01-13 04:05:26,672 | INFO     | all workflow threads have been joined
[2026-01-12 23:13:35] 2026-01-13 04:05:26,672 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:13:35] 2026-01-13 04:05:26,673 | INFO     | traces error code: 0
[2026-01-12 23:13:35] 2026-01-13 04:05:26,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:13:35] 2026-01-13 04:05:27,728 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:13:35] 2026-01-13 04:05:27,749 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:13:35] 2026-01-13 04:05:27,776 [wrapper] pilotpid: 789924
[2026-01-12 23:13:35] 2026-01-13 04:05:27,795 [wrapper] Pilot exit status: 0
[2026-01-12 23:13:35] 2026-01-13 04:05:27,902 [wrapper] pandaids: 6966868785
[2026-01-12 23:13:35] 2026-01-13 04:05:28,328 [wrapper] cleanup supervisor_pilot 3806733 789925
[2026-01-12 23:13:35] 2026-01-13 04:05:28,357 [wrapper] Test setup, not cleaning
[2026-01-12 23:13:35] 2026-01-13 04:05:28,387 [wrapper] apfmon messages muted
[2026-01-12 23:13:35] 2026-01-13 04:05:28,391 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:13:35] 2026-01-13 04:05:28,458 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:13:35]  *** Error codes and diagnostics ***
[2026-01-12 23:13:35]     "exeErrorCode": 0,
[2026-01-12 23:13:35]     "exeErrorDiag": "",
[2026-01-12 23:13:35]     "pilotErrorCode": 0,
[2026-01-12 23:13:35]     "pilotErrorDiag": "",
[2026-01-12 23:13:35]  *** Listing of results directory ***
[2026-01-12 23:13:35] total 1799008
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-12 23:13:35] -rwx------. 1 boincer umatlas      36322 Jan 12 04:03 runpilot2-wrapper.sh
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:03 queuedata.json
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas        100 Jan 12 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:13:35] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 05:57 run_atlas
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas        105 Jan 12 05:57 job.xml
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas  322682260 Jan 12 05:57 EVNT.48118027._000417.pool.root.1
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas  320283301 Jan 12 05:57 EVNT.48118027._000418.pool.root.1
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 05:57 start_atlas.sh
[2026-01-12 23:13:35] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 05:57 shared
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 05:57 input.tar.gz
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas          0 Jan 12 05:57 boinc_lockfile
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas       3436 Jan 12 05:57 pandaJob.out
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas         57 Jan 12 05:57 setup.sh.local
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas     987696 Jan 12 05:58 agis_schedconf.cvmfs.json
[2026-01-12 23:13:35] drwx------. 5 boincer umatlas       4096 Jan 12 05:58 pilot3
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas        533 Jan 12 22:46 boinc_task_state.xml
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas 1175100136 Jan 12 23:03 HITS.48187943._002035.pool.root.1
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas       1069 Jan 12 23:03 memory_monitor_summary.json
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas    1516240 Jan 12 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas    2504451 Jan 12 23:04 log.48187943._002035.job.log.tgz.1
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas         95 Jan 12 23:04 pilot_heartbeat.json
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas      27696 Jan 12 23:04 heartbeat.json
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas       4824 Jan 12 23:05 pilotlog.txt
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas    7572280 Jan 12 23:05 log.48187943._002035.job.log.1
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas        353 Jan 12 23:05 output.list
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas        620 Jan 12 23:05 runtime_log
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas   10117120 Jan 12 23:05 result.tar.gz
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas       9390 Jan 12 23:05 runtime_log.err
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas        663 Jan 12 23:05 G0vNDmx0Sz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDshKDmlDZjln.diag
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas       6959 Jan 12 23:13 init_data.xml
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 23:13 boinc_mmap_file
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas         29 Jan 12 23:13 wrapper_checkpoint.txt
[2026-01-12 23:13:35] -rw-r--r--. 1 boincer umatlas      21780 Jan 12 23:13 stderr.txt
[2026-01-12 23:13:35] HITS file was successfully produced:
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas 1175100136 Jan 12 23:03 shared/HITS.pool.root.1
[2026-01-12 23:13:35]  *** Contents of shared directory: ***
[2026-01-12 23:13:35] total 1785948
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas  322682260 Jan 12 05:57 ATLAS.root_0
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas  320283301 Jan 12 05:57 ATLAS.root_1
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 05:57 start_atlas.sh
[2026-01-12 23:13:35] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 05:57 input.tar.gz
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas 1175100136 Jan 12 23:03 HITS.pool.root.1
[2026-01-12 23:13:35] -rw-------. 1 boincer umatlas   10117120 Jan 12 23:05 result.tar.gz
23:13:37 (784059): run_atlas exited; CPU time 227789.723965
23:13:37 (784059): called boinc_finish(0)

</stderr_txt>
]]>

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