Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:39:32 (136353): wrapper (7.7.26015): starting
07:39:32 (136353): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 07:39:32] Arguments: --nthreads 8
[2026-01-12 07:39:32] Threads: 8
[2026-01-12 07:39:32] Checking for CVMFS
[2026-01-12 07:39:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 07:39:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 07:39:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 07:39:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 07:39:34] 2.13.3.0 44796 97600 379248 155051 1 441 19721012 32947200 25549 16776704 0 316496774 99.464 459264848 34387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 07:39:34] CVMFS is ok
[2026-01-12 07:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 07:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 07:39:34] Further information can be found at the LHC@home message board.
[2026-01-12 07:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 07:39:34] Checking for apptainer binary...
[2026-01-12 07:39:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 07:39:34] Running /usr/bin/apptainer --version
[2026-01-12 07:39:34] apptainer version 1.4.5-2.el9
[2026-01-12 07:39:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 07:39:35] c6-6-8-2.aglt2.org
[2026-01-12 07:39:35] apptainer works
[2026-01-12 07:39:35] Set ATHENA_PROC_NUMBER=8
[2026-01-12 07:39:35] Set ATHENA_CORE_NUMBER=8
[2026-01-12 07:39:35] Starting ATLAS job with PandaID=6966863558
[2026-01-12 07:39:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 21:30:18]  *** The last 200 lines of the pilot log: ***
[2026-01-13 21:30:39] 2026-01-14 02:29:31,837 | INFO     | sum of deviations: 14339406008348.23
[2026-01-13 21:30:39] 2026-01-14 02:29:31,837 | INFO     | mean x: 1768289730.196052
[2026-01-13 21:30:39] 2026-01-14 02:29:31,837 | INFO     | mean y: 3472981.802602064
[2026-01-13 21:30:39] 2026-01-14 02:29:31,837 | INFO     | intersect: -7380297434.256322
[2026-01-13 21:30:39] 2026-01-14 02:29:31,844 | INFO     | chi2: 12.07039988122769
[2026-01-13 21:30:39] 2026-01-14 02:29:31,847 | INFO     | sum of square deviations: 3410992831068.133
[2026-01-13 21:30:39] 2026-01-14 02:29:32,155 | INFO     | sum of deviations: 15278094647024.396
[2026-01-13 21:30:39] 2026-01-14 02:29:32,155 | INFO     | mean x: 1768289577.7032373
[2026-01-13 21:30:39] 2026-01-14 02:29:32,155 | INFO     | mean y: 3479189.965827338
[2026-01-13 21:30:39] 2026-01-14 02:29:32,155 | INFO     | intersect: -7916823451.959376
[2026-01-13 21:30:39] 2026-01-14 02:29:32,158 | INFO     | chi2: 8.716268474395097
[2026-01-13 21:30:39] 2026-01-14 02:29:32,158 | INFO     | current chi2=8.716268474395097 (change=27.788071976381296 %)
[2026-01-13 21:30:39] 2026-01-14 02:29:32,175 | INFO     | sum of square deviations: 3388040787406.7144
[2026-01-13 21:30:39] 2026-01-14 02:29:32,475 | INFO     | sum of deviations: 15970212066401.688
[2026-01-13 21:30:39] 2026-01-14 02:29:32,475 | INFO     | mean x: 1768289425.2104552
[2026-01-13 21:30:39] 2026-01-14 02:29:32,475 | INFO     | mean y: 3483786.124831005
[2026-01-13 21:30:39] 2026-01-14 02:29:32,475 | INFO     | intersect: -8331704273.108081
[2026-01-13 21:30:39] 2026-01-14 02:29:32,480 | INFO     | chi2: 6.521909228659315
[2026-01-13 21:30:39] 2026-01-14 02:29:32,480 | INFO     | current chi2=6.521909228659315 (change=25.175443507527667 %)
[2026-01-13 21:30:39] 2026-01-14 02:29:32,506 | INFO     | sum of square deviations: 3365191142737.1646
[2026-01-13 21:30:39] 2026-01-14 02:29:33,097 | INFO     | sum of deviations: 16121556388190.615
[2026-01-13 21:30:39] 2026-01-14 02:29:33,098 | INFO     | mean x: 1768289272.7149954
[2026-01-13 21:30:39] 2026-01-14 02:29:33,098 | INFO     | mean y: 3484794.8852755195
[2026-01-13 21:30:39] 2026-01-14 02:29:33,098 | INFO     | intersect: -8467824563.643465
[2026-01-13 21:30:39] 2026-01-14 02:29:33,105 | INFO     | chi2: 6.238695354647954
[2026-01-13 21:30:39] 2026-01-14 02:29:33,105 | INFO     | current chi2=6.238695354647954 (change=4.342499474951757 %)
[2026-01-13 21:30:39] 2026-01-14 02:29:33,105 | INFO     | right removable region: 2213
[2026-01-13 21:30:39] 2026-01-14 02:29:33,112 | INFO     | sum of square deviations: 3410988485428.1377
[2026-01-13 21:30:39] 2026-01-14 02:29:33,378 | INFO     | sum of deviations: 13273299944062.402
[2026-01-13 21:30:39] 2026-01-14 02:29:33,379 | INFO     | mean x: 1768289882.7032373
[2026-01-13 21:30:39] 2026-01-14 02:29:33,379 | INFO     | mean y: 3480031.6339928056
[2026-01-13 21:30:39] 2026-01-14 02:29:33,379 | INFO     | intersect: -6877528831.761502
[2026-01-13 21:30:39] 2026-01-14 02:29:33,386 | INFO     | chi2: 8.006448591269043
[2026-01-13 21:30:39] 2026-01-14 02:29:33,386 | INFO     | current chi2=8.006448591269043 (change=33.668737821014915 %)
[2026-01-13 21:30:39] 2026-01-14 02:29:33,393 | INFO     | sum of square deviations: 3388032231552.1377
[2026-01-13 21:30:39] 2026-01-14 02:29:33,579 | INFO     | monitor loop #7571: job 0:6966863558 is in state 'finished'
[2026-01-13 21:30:39] 2026-01-14 02:29:33,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 21:30:39] 2026-01-14 02:29:33,631 | INFO     | time since job start (136168s) is within the limit (349056.0s)
[2026-01-13 21:30:39] 2026-01-14 02:29:33,825 | INFO     | sum of deviations: 12529020849770.729
[2026-01-13 21:30:39] 2026-01-14 02:29:33,828 | INFO     | mean x: 1768290035.2100046
[2026-01-13 21:30:39] 2026-01-14 02:29:33,829 | INFO     | mean y: 3484974.777377197
[2026-01-13 21:30:39] 2026-01-14 02:29:33,829 | INFO     | intersect: -6535692106.616049
[2026-01-13 21:30:39] 2026-01-14 02:29:33,869 | INFO     | chi2: 6.101750434538196
[2026-01-13 21:30:39] 2026-01-14 02:29:33,870 | INFO     | current chi2=6.101750434538196 (change=23.789550822919203 %)
[2026-01-13 21:30:39] 2026-01-14 02:29:33,870 | INFO     | left removable region: 20
[2026-01-13 21:30:39] 2026-01-14 02:29:33,876 | INFO     | sum of square deviations: 3270332909518.173
[2026-01-13 21:30:39] 2026-01-14 02:29:34,087 | INFO     | sum of deviations: 14056586863645.951
[2026-01-13 21:30:39] 2026-01-14 02:29:34,088 | INFO     | mean x: 1768289852.2366621
[2026-01-13 21:30:39] 2026-01-14 02:29:34,088 | INFO     | mean y: 3498446.7419060646
[2026-01-13 21:30:39] 2026-01-14 02:29:34,088 | INFO     | intersect: -7596987679.831192
[2026-01-13 21:30:39] 2026-01-14 02:29:34,095 | INFO     | chi2: 0.19961277164666855
[2026-01-13 21:30:39] 2026-01-14 02:29:34,095 | INFO     | current memory leak: 4.30 B/s (using 2193 data points, chi2=0.20)
[2026-01-13 21:30:39] 2026-01-14 02:29:34,107 | INFO     | could have reported an average CPU frequency of 2640 MHz (78 samples)
[2026-01-13 21:30:39] 2026-01-14 02:29:34,107 | INFO     | ..............................
[2026-01-13 21:30:39] 2026-01-14 02:29:34,107 | INFO     | . Timing measurements:
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . get job = 0 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . initial setup = 3 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . payload setup = 91 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . stage-in = 0 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . payload execution = 135988 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . stage-out = 10 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | . log creation = 3 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,108 | INFO     | ..............................
[2026-01-13 21:30:39] 2026-01-14 02:29:34,465 | INFO     | 
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | job summary report
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | --------------------------------------------------
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | PanDA job id: 6966863558
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | task id: 48187943
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | errors: (none)
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | pilot state: finished 
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | transexitcode: 0
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | exeerrorcode: 0
[2026-01-13 21:30:39] 2026-01-14 02:29:34,466 | INFO     | exeerrordiag: 
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | exitcode: 0
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | exitmsg: OK
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | cpuconsumptiontime: 321962 s
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | nevents: 2050
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | neventsw: 0
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | pid: 168413
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | pgrp: 168413
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | corecount: 8
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | event service: False
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | sizes: {0: 2284396, 1: 2284651, 12: 2284651, 18: 2284941, 23: 2284969, 136083: 2392007, 136084: 2392134, 136095: 2401188, 136097: 2401244, 136125: 2401490}
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | --------------------------------------------------
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | 
[2026-01-13 21:30:39] 2026-01-14 02:29:34,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 21:30:39] 2026-01-14 02:29:34,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,626 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,627 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | job 6966863558 has completed (purged errors)
[2026-01-13 21:30:39] 2026-01-14 02:29:34,629 | INFO     | overall cleanup function is called
[2026-01-13 21:30:39] 2026-01-14 02:29:35,747 | INFO     | --- collectZombieJob: --- 10, [168413]
[2026-01-13 21:30:39] 2026-01-14 02:29:35,748 | INFO     | zombie collector waiting for pid 168413
[2026-01-13 21:30:39] 2026-01-14 02:29:35,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 21:30:39] 2026-01-14 02:29:35,748 | INFO     | collected zombie processes
[2026-01-13 21:30:39] 2026-01-14 02:29:35,748 | INFO     | will attempt to kill all subprocesses of pid=168413
[2026-01-13 21:30:39] 2026-01-14 02:29:37,397 | INFO     | PID=144146 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:30:39] 2026-01-14 02:29:37,397 | INFO     | .. there are 30 such processes running
[2026-01-13 21:30:39] 2026-01-14 02:29:37,799 | INFO     | process IDs to be killed: [168413] (in reverse order)
[2026-01-13 21:30:39] 2026-01-14 02:29:38,056 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 21:30:39] 2026-01-14 02:29:38,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 21:30:39] 2026-01-14 02:29:38,188 | INFO     | did not find any defunct processes belonging to 168413
[2026-01-13 21:30:39] 2026-01-14 02:29:38,269 | INFO     | did not find any defunct processes belonging to 168413
[2026-01-13 21:30:39] 2026-01-14 02:29:38,270 | INFO     | ready for new job
[2026-01-13 21:30:39] 2026-01-14 02:29:38,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 21:30:39] 2026-01-14 02:29:38,286 | INFO     | ***************************************
[2026-01-13 21:30:39] 2026-01-14 02:29:38,286 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 21:30:39] 2026-01-14 02:29:38,286 | INFO     | ***************************************
[2026-01-13 21:30:39] 2026-01-14 02:29:38,286 | INFO     | 
[2026-01-13 21:30:39] 2026-01-14 02:29:38,292 | INFO     | architecture information:
[2026-01-13 21:30:39] 2026-01-14 02:29:38,295 | INFO     | executing command: cat /etc/os-release
[2026-01-13 21:30:39] 2026-01-14 02:29:38,312 | INFO     | cat /etc/os-release:
[2026-01-13 21:30:39] NAME="CentOS Linux"
[2026-01-13 21:30:39] VERSION="7 (Core)"
[2026-01-13 21:30:39] ID="centos"
[2026-01-13 21:30:39] ID_LIKE="rhel fedora"
[2026-01-13 21:30:39] VERSION_ID="7"
[2026-01-13 21:30:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 21:30:39] ANSI_COLOR="0;31"
[2026-01-13 21:30:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 21:30:39] HOME_URL="https://www.centos.org/"
[2026-01-13 21:30:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 21:30:39] 
[2026-01-13 21:30:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 21:30:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 21:30:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 21:30:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 21:30:39] 
[2026-01-13 21:30:39] 2026-01-14 02:29:38,313 | INFO     | ***************************************
[2026-01-13 21:30:39] 2026-01-14 02:29:38,816 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 21:30:39] 2026-01-14 02:29:38,839 | INFO     | sufficient remaining disk space (69758615552 B)
[2026-01-13 21:30:39] 2026-01-14 02:29:38,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 21:30:39] 2026-01-14 02:29:38,840 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 21:30:39] 2026-01-14 02:29:38,845 | INFO     | update_server=False
[2026-01-13 21:30:39] 2026-01-14 02:29:38,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 21:30:39] 2026-01-14 02:29:39,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 21:30:39] 2026-01-14 02:29:39,463 | INFO     | all payload control threads have been joined
[2026-01-13 21:30:39] 2026-01-14 02:29:39,464 | INFO     | all job control threads have been joined
[2026-01-13 21:30:39] 2026-01-14 02:29:39,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:30:39] 2026-01-14 02:29:39,516 | INFO     | all data control threads have been joined
[2026-01-13 21:30:39] 2026-01-14 02:29:39,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 21:30:39] 2026-01-14 02:29:39,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 21:30:39] 2026-01-14 02:29:39,636 | INFO     | aborting loop
[2026-01-13 21:30:39] 2026-01-14 02:29:39,853 | INFO     | [job] retrieve thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:39,918 | INFO     | [job] validate thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,010 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,345 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,465 | INFO     | [payload] failed_post thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,470 | INFO     | [payload] control thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,470 | INFO     | [job] control thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,474 | INFO     | [job] queue monitor thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,523 | INFO     | [data] control thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,664 | INFO     | [job] job monitor thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,706 | INFO     | [data] copytool_in thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,881 | INFO     | [payload] validate_post thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:40,972 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:41,305 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:41,617 | INFO     | [data] copytool_out thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:29:43,306 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 21:30:39] 2026-01-14 02:30:10,179 | INFO     | PID=144146 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 21:30:39] 2026-01-14 02:30:10,179 | INFO     | .. there are 30 such processes running
[2026-01-13 21:30:39] 2026-01-14 02:30:10,180 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 21:30:39] 2026-01-14 02:30:10,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 21:30:39] 2026-01-14 02:30:10,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 21:30:39] 2026-01-14 02:30:11,507 | INFO     | [monitor] cgroup control has ended
[2026-01-13 21:30:39] 2026-01-14 02:30:12,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716225582912)>', '<ExcThread(monitor, started 139715713935104)>']
[2026-01-13 21:30:39] 2026-01-14 02:30:13,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 21:30:39] 2026-01-14 02:30:13,209 | INFO     | [monitor] control thread has ended
[2026-01-13 21:30:39] 2026-01-14 02:30:17,403 | INFO     | all workflow threads have been joined
[2026-01-13 21:30:39] 2026-01-14 02:30:17,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 21:30:39] 2026-01-14 02:30:17,404 | INFO     | traces error code: 0
[2026-01-13 21:30:39] 2026-01-14 02:30:17,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 21:30:39] 2026-01-14 02:30:17,592 [wrapper] ==== pilot stdout END ====
[2026-01-13 21:30:39] 2026-01-14 02:30:17,596 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 21:30:39] 2026-01-14 02:30:17,600 [wrapper] pilotpid: 144146
[2026-01-13 21:30:39] 2026-01-14 02:30:17,602 [wrapper] Pilot exit status: 0
[2026-01-13 21:30:39] 2026-01-14 02:30:17,617 [wrapper] pandaids: 6966863558
[2026-01-13 21:30:39] 2026-01-14 02:30:17,772 [wrapper] cleanup supervisor_pilot  452046 144147
[2026-01-13 21:30:39] 2026-01-14 02:30:17,799 [wrapper] Test setup, not cleaning
[2026-01-13 21:30:39] 2026-01-14 02:30:17,814 [wrapper] apfmon messages muted
[2026-01-13 21:30:39] 2026-01-14 02:30:17,852 [wrapper] ==== wrapper stdout END ====
[2026-01-13 21:30:39] 2026-01-14 02:30:17,856 [wrapper] ==== wrapper stderr END ====
[2026-01-13 21:30:39]  *** Error codes and diagnostics ***
[2026-01-13 21:30:39]     "exeErrorCode": 0,
[2026-01-13 21:30:39]     "exeErrorDiag": "",
[2026-01-13 21:30:39]     "pilotErrorCode": 0,
[2026-01-13 21:30:39]     "pilotErrorDiag": "",
[2026-01-13 21:30:39]  *** Listing of results directory ***
[2026-01-13 21:30:39] total 1509636
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 04:01 queuedata.json
[2026-01-13 21:30:39] -rwx------ 1 boincer umatlas      36322 Jan 12 04:01 runpilot2-wrapper.sh
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas        100 Jan 12 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 21:30:39] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 07:39 run_atlas
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas        105 Jan 12 07:39 job.xml
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas  321534287 Jan 12 07:39 EVNT.48118027._000310.pool.root.1
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 07:39 start_atlas.sh
[2026-01-13 21:30:39] drwxrwx--x 2 boincer umatlas       4096 Jan 12 07:39 shared
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas     592606 Jan 12 07:39 input.tar.gz
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas          0 Jan 12 07:39 boinc_lockfile
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas       2897 Jan 12 07:39 pandaJob.out
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas         57 Jan 12 07:39 setup.sh.local
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas     987696 Jan 12 07:40 agis_schedconf.cvmfs.json
[2026-01-13 21:30:39] drwx------ 5 boincer umatlas       4096 Jan 12 07:40 pilot3
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas        534 Jan 13 21:14 boinc_task_state.xml
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas 1181133741 Jan 13 21:27 HITS.48187943._001510.pool.root.1
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas       1072 Jan 13 21:28 memory_monitor_summary.json
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas    1516246 Jan 13 21:28 agis_ddmendpoints.agis.ALL.json
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas    3308860 Jan 13 21:29 log.48187943._001510.job.log.tgz.1
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas       6878 Jan 13 21:29 init_data.xml
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas      27586 Jan 13 21:29 heartbeat.json
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas         95 Jan 13 21:30 pilot_heartbeat.json
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas       4823 Jan 13 21:30 pilotlog.txt
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas   16318304 Jan 13 21:30 log.48187943._001510.job.log.1
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas        353 Jan 13 21:30 output.list
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas        620 Jan 13 21:30 runtime_log
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas   19660800 Jan 13 21:30 result.tar.gz
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas        663 Jan 13 21:30 vsqNDm0ySz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaOnKDmQNLLRm.diag
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas       9344 Jan 13 21:30 runtime_log.err
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas         30 Jan 13 21:30 wrapper_checkpoint.txt
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas       8192 Jan 13 21:30 boinc_mmap_file
[2026-01-13 21:30:39] -rw-r--r-- 1 boincer umatlas      21244 Jan 13 21:30 stderr.txt
[2026-01-13 21:30:39] HITS file was successfully produced:
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas 1181133741 Jan 13 21:27 shared/HITS.pool.root.1
[2026-01-13 21:30:39]  *** Contents of shared directory: ***
[2026-01-13 21:30:39] total 1487252
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas  321534287 Jan 12 07:39 ATLAS.root_0
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 07:39 start_atlas.sh
[2026-01-13 21:30:39] -rw-r--r-- 2 boincer umatlas     592606 Jan 12 07:39 input.tar.gz
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas 1181133741 Jan 13 21:27 HITS.pool.root.1
[2026-01-13 21:30:39] -rw------- 1 boincer umatlas   19660800 Jan 13 21:30 result.tar.gz
21:30:41 (136353): run_atlas exited; CPU time 325735.607519
21:30:41 (136353): called boinc_finish(0)

</stderr_txt>
]]>

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