Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:38 (3217): wrapper (7.7.26015): starting
10:52:38 (3217): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 10:52:38] Arguments: --nthreads 8
[2026-01-12 10:52:38] Threads: 8
[2026-01-12 10:52:38] Checking for CVMFS
[2026-01-12 10:52:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 10:52:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 10:52:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 10:52:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 10:52:41] 2.11.2.0 12106 39562 101848 155047 2 60 18373541 25165824 899 130560 0 16428357 99.823 9288208 2858 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 10:52:41] CVMFS is ok
[2026-01-12 10:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 10:52:41] Checking for apptainer binary...
[2026-01-12 10:52:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 10:52:41] Running /usr/bin/apptainer --version
[2026-01-12 10:52:41] apptainer version 1.3.2-1.el7
[2026-01-12 10:52:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 10:53:18] cg-vwn435.simple-grid.lan
[2026-01-12 10:53:18] apptainer works
[2026-01-12 10:53:18] Set ATHENA_PROC_NUMBER=8
[2026-01-12 10:53:18] Set ATHENA_CORE_NUMBER=8
[2026-01-12 10:53:18] Starting ATLAS job with PandaID=6966859515
[2026-01-12 10:53:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 16:42:18]  *** The last 200 lines of the pilot log: ***
[2026-01-13 16:42:18] 2026-01-13 15:41:28,142 | INFO     | time since job start (107027s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:29,279 | INFO     | monitor loop #7238: job 0:6966859515 is in state 'finished'
[2026-01-13 16:42:18] 2026-01-13 15:41:29,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:42:18] 2026-01-13 15:41:30,154 | INFO     | time since job start (107029s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:31,784 | INFO     | monitor loop #7239: job 0:6966859515 is in state 'finished'
[2026-01-13 16:42:18] 2026-01-13 15:41:31,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:42:18] 2026-01-13 15:41:32,163 | INFO     | time since job start (107031s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:34,172 | INFO     | time since job start (107033s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:34,290 | INFO     | monitor loop #7240: job 0:6966859515 is in state 'finished'
[2026-01-13 16:42:18] 2026-01-13 15:41:34,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:42:18] 2026-01-13 15:41:36,181 | INFO     | time since job start (107035s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:36,795 | INFO     | monitor loop #7241: job 0:6966859515 is in state 'finished'
[2026-01-13 16:42:18] 2026-01-13 15:41:36,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:42:18] 2026-01-13 15:41:38,188 | INFO     | time since job start (107037s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:39,300 | INFO     | monitor loop #7242: job 0:6966859515 is in state 'finished'
[2026-01-13 16:42:18] 2026-01-13 15:41:39,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:42:18] 2026-01-13 15:41:40,197 | INFO     | time since job start (107039s) is within the limit (349056.0s)
[2026-01-13 16:42:18] 2026-01-13 15:41:40,966 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 16:42:18] 2026-01-13 15:41:40,967 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 16:42:18] 2026-01-13 15:41:40,969 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6966859515/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 16:42:18] 2026-01-13 15:41:40,970 | INFO     | extracted standard info from prmon json
[2026-01-13 16:42:18] 2026-01-13 15:41:40,970 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 16:42:18] 2026-01-13 15:41:40,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 16:42:18] 2026-01-13 15:41:41,023 | INFO     | fitting pss+swap vs Time
[2026-01-13 16:42:18] 2026-01-13 15:41:41,026 | INFO     | sum of square deviations: 1633524449452.8298
[2026-01-13 16:42:18] 2026-01-13 15:41:41,165 | INFO     | sum of deviations: 8158162501284.102
[2026-01-13 16:42:18] 2026-01-13 15:41:41,165 | INFO     | mean x: 1768265698.40977
[2026-01-13 16:42:18] 2026-01-13 15:41:41,165 | INFO     | mean y: 3356919.3350574714
[2026-01-13 16:42:18] 2026-01-13 15:41:41,166 | INFO     | intersect: -8827731539.674929
[2026-01-13 16:42:18] 2026-01-13 15:41:41,168 | INFO     | chi2: 46.2741407834653
[2026-01-13 16:42:18] 2026-01-13 15:41:41,171 | INFO     | sum of square deviations: 1619483236428.6826
[2026-01-13 16:42:18] 2026-01-13 15:41:41,308 | INFO     | sum of deviations: 8834583955801.74
[2026-01-13 16:42:18] 2026-01-13 15:41:41,308 | INFO     | mean x: 1768265545.912392
[2026-01-13 16:42:18] 2026-01-13 15:41:41,308 | INFO     | mean y: 3364265.9982708935
[2026-01-13 16:42:18] 2026-01-13 15:41:41,309 | INFO     | intersect: -9642855015.63155
[2026-01-13 16:42:18] 2026-01-13 15:41:41,311 | INFO     | chi2: 43.1871998936731
[2026-01-13 16:42:18] 2026-01-13 15:41:41,311 | INFO     | current chi2=43.1871998936731 (change=6.6709847822722255 %)
[2026-01-13 16:42:18] 2026-01-13 15:41:41,311 | INFO     | right removable region: 1734
[2026-01-13 16:42:18] 2026-01-13 15:41:41,314 | INFO     | sum of square deviations: 1619482270798.6816
[2026-01-13 16:42:18] 2026-01-13 15:41:41,420 | INFO     | sum of deviations: 7267900779682.626
[2026-01-13 16:42:18] 2026-01-13 15:41:41,421 | INFO     | mean x: 1768265850.912392
[2026-01-13 16:42:18] 2026-01-13 15:41:41,421 | INFO     | mean y: 3366587.89221902
[2026-01-13 16:42:18] 2026-01-13 15:41:41,421 | INFO     | intersect: -7932244062.661126
[2026-01-13 16:42:18] 2026-01-13 15:41:41,423 | INFO     | chi2: 40.929390631132414
[2026-01-13 16:42:18] 2026-01-13 15:41:41,424 | INFO     | current chi2=40.929390631132414 (change=11.550187776242135 %)
[2026-01-13 16:42:18] 2026-01-13 15:41:41,424 | INFO     | left removable region: 10
[2026-01-13 16:42:18] 2026-01-13 15:41:41,426 | INFO     | sum of square deviations: 1588874370207.4683
[2026-01-13 16:42:18] 2026-01-13 15:41:41,552 | INFO     | sum of deviations: 7214699680885.209
[2026-01-13 16:42:18] 2026-01-13 15:41:41,552 | INFO     | mean x: 1768265820.4182134
[2026-01-13 16:42:18] 2026-01-13 15:41:41,552 | INFO     | mean y: 3385430.075986079
[2026-01-13 16:42:18] 2026-01-13 15:41:41,552 | INFO     | intersect: -8025888054.035717
[2026-01-13 16:42:18] 2026-01-13 15:41:41,554 | INFO     | chi2: 31.784858546383294
[2026-01-13 16:42:18] 2026-01-13 15:41:41,555 | INFO     | current memory leak: 4.54 B/s (using 1724 data points, chi2=31.78)
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | could have reported an average CPU frequency of 1999 MHz (58 samples)
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | ..............................
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . Timing measurements:
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . get job = 0 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . initial setup = 11 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . payload setup = 378 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . stage-in = 0 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . payload execution = 106322 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,557 | INFO     | . stage-out = 6 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,558 | INFO     | . log creation = 2 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,558 | INFO     | ..............................
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | job summary report
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | --------------------------------------------------
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | PanDA job id: 6966859515
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | task id: 48187943
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | errors: (none)
[2026-01-13 16:42:18] 2026-01-13 15:41:41,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | pilot state: finished 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | transexitcode: 0
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | exeerrorcode: 0
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | exeerrordiag: 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | exitcode: 0
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | exitmsg: OK
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | cpuconsumptiontime: 394730 s
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | nevents: 2050
[2026-01-13 16:42:18] 2026-01-13 15:41:41,711 | INFO     | neventsw: 0
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | pid: 14421
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | pgrp: 14421
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | corecount: 8
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | event service: False
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | sizes: {0: 2284394, 1: 2284649, 12: 2284649, 23: 2284677, 34: 2284705, 44: 2284733, 55: 2284889, 66: 2284917, 77: 2284945, 87: 2285001, 98: 2285029, 109: 2285337, 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | --------------------------------------------------
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | 
[2026-01-13 16:42:18] 2026-01-13 15:41:41,712 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-13 16:42:18] 2026-01-13 15:41:42,130 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,130 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,130 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,130 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,132 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 16:42:18] 2026-01-13 15:41:42,133 | INFO     | job 6966859515 has completed (purged errors)
[2026-01-13 16:42:18] 2026-01-13 15:41:42,133 | INFO     | overall cleanup function is called
[2026-01-13 16:42:18] 2026-01-13 15:41:43,155 | INFO     | --- collectZombieJob: --- 10, [14421]
[2026-01-13 16:42:18] 2026-01-13 15:41:43,156 | INFO     | zombie collector waiting for pid 14421
[2026-01-13 16:42:18] 2026-01-13 15:41:43,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 16:42:18] 2026-01-13 15:41:43,156 | INFO     | collected zombie processes
[2026-01-13 16:42:18] 2026-01-13 15:41:43,156 | INFO     | will attempt to kill all subprocesses of pid=14421
[2026-01-13 16:42:18] 2026-01-13 15:41:43,268 | INFO     | process IDs to be killed: [14421] (in reverse order)
[2026-01-13 16:42:18] 2026-01-13 15:41:44,428 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 16:42:18] 2026-01-13 15:41:44,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 16:42:18] 2026-01-13 15:41:44,431 | INFO     | did not find any defunct processes belonging to 14421
[2026-01-13 16:42:18] 2026-01-13 15:41:44,432 | INFO     | did not find any defunct processes belonging to 14421
[2026-01-13 16:42:18] 2026-01-13 15:41:44,433 | INFO     | ready for new job
[2026-01-13 16:42:18] 2026-01-13 15:41:44,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 16:42:18] 2026-01-13 15:41:44,439 | INFO     | ***************************************
[2026-01-13 16:42:18] 2026-01-13 15:41:44,440 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 16:42:18] 2026-01-13 15:41:44,440 | INFO     | ***************************************
[2026-01-13 16:42:18] 2026-01-13 15:41:44,440 | INFO     | 
[2026-01-13 16:42:18] 2026-01-13 15:41:44,441 | INFO     | pilot is running in a VM
[2026-01-13 16:42:18] 2026-01-13 15:41:44,441 | INFO     | architecture information:
[2026-01-13 16:42:18] 2026-01-13 15:41:44,456 | INFO     | executing command: cat /etc/os-release
[2026-01-13 16:42:18] 2026-01-13 15:41:44,732 | INFO     | cat /etc/os-release:
[2026-01-13 16:42:18] NAME="CentOS Linux"
[2026-01-13 16:42:18] VERSION="7 (Core)"
[2026-01-13 16:42:18] ID="centos"
[2026-01-13 16:42:18] ID_LIKE="rhel fedora"
[2026-01-13 16:42:18] VERSION_ID="7"
[2026-01-13 16:42:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 16:42:18] ANSI_COLOR="0;31"
[2026-01-13 16:42:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 16:42:18] HOME_URL="https://www.centos.org/"
[2026-01-13 16:42:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 16:42:18] 
[2026-01-13 16:42:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 16:42:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 16:42:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 16:42:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 16:42:18] 
[2026-01-13 16:42:18] 2026-01-13 15:41:44,732 | INFO     | ***************************************
[2026-01-13 16:42:18] 2026-01-13 15:41:45,236 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-13 16:42:18] 2026-01-13 15:41:45,558 | INFO     | sufficient remaining disk space (494889074688 B)
[2026-01-13 16:42:18] 2026-01-13 15:41:45,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 16:42:18] 2026-01-13 15:41:45,559 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 16:42:18] 2026-01-13 15:41:45,559 | INFO     | update_server=False
[2026-01-13 16:42:18] 2026-01-13 15:41:45,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 16:42:18] 2026-01-13 15:41:45,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 16:42:18] 2026-01-13 15:41:45,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:42:18] 2026-01-13 15:41:45,561 | INFO     | aborting loop
[2026-01-13 16:42:18] 2026-01-13 15:41:45,574 | INFO     | all payload control threads have been joined
[2026-01-13 16:42:18] 2026-01-13 15:41:45,803 | INFO     | all job control threads have been joined
[2026-01-13 16:42:18] 2026-01-13 15:41:46,027 | INFO     | all data control threads have been joined
[2026-01-13 16:42:18] 2026-01-13 15:41:46,566 | INFO     | [job] retrieve thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,569 | INFO     | [job] job monitor thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,580 | INFO     | [payload] control thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,707 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:42:18] 2026-01-13 15:41:46,809 | INFO     | [job] control thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,869 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:46,998 | INFO     | [job] validate thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,033 | INFO     | [data] control thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,566 | INFO     | [data] copytool_out thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 16:42:18] 2026-01-13 15:41:47,622 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,708 | INFO     | [payload] failed_post thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,731 | INFO     | [job] queue monitor thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,773 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,840 | INFO     | [payload] validate_post thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:47,926 | INFO     | [monitor] cgroup control has ended
[2026-01-13 16:42:18] 2026-01-13 15:41:47,963 | INFO     | [data] copytool_in thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:51,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 16:42:18] 2026-01-13 15:41:53,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987648534336)>', '<ExcThread(monitor, started 139987077035776)>']
[2026-01-13 16:42:18] 2026-01-13 15:41:58,670 | INFO     | all workflow threads have been joined
[2026-01-13 16:42:18] 2026-01-13 15:41:58,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 16:42:18] 2026-01-13 15:41:58,671 | INFO     | traces error code: 0
[2026-01-13 16:42:18] 2026-01-13 15:41:58,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 16:42:18] 2026-01-13 15:42:13,351 | INFO     | PID=7220 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | INFO     | .. there are 2 such processes running
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 16:42:18] 2026-01-13 15:42:13,352 | INFO     | [monitor] control thread has ended
[2026-01-13 16:42:18] 2026-01-13 15:42:13,710 [wrapper] ==== pilot stdout END ====
[2026-01-13 16:42:18] 2026-01-13 15:42:13,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 16:42:18] 2026-01-13 15:42:13,870 [wrapper] pilotpid: 7220
[2026-01-13 16:42:18] 2026-01-13 15:42:13,935 [wrapper] Pilot exit status: 0
[2026-01-13 16:42:18] 2026-01-13 15:42:14,339 [wrapper] pandaids: 6966859515
[2026-01-13 16:42:18] 2026-01-13 15:42:15,312 [wrapper] cleanup supervisor_pilot 10251 7221
[2026-01-13 16:42:18] 2026-01-13 15:42:15,430 [wrapper] Test setup, not cleaning
[2026-01-13 16:42:18] 2026-01-13 15:42:15,603 [wrapper] apfmon messages muted
[2026-01-13 16:42:18] 2026-01-13 15:42:15,681 [wrapper] ==== wrapper stdout END ====
[2026-01-13 16:42:18] 2026-01-13 15:42:15,795 [wrapper] ==== wrapper stderr END ====
[2026-01-13 16:42:18]  *** Error codes and diagnostics ***
[2026-01-13 16:42:18]     "exeErrorCode": 0,
[2026-01-13 16:42:18]     "exeErrorDiag": "",
[2026-01-13 16:42:18]     "pilotErrorCode": 0,
[2026-01-13 16:42:18]     "pilotErrorDiag": "",
[2026-01-13 16:42:18]  *** Listing of results directory ***
[2026-01-13 16:42:18] total 1494452
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc     579449 Jan 12 09:50 pilot3.tar.gz
[2026-01-13 16:42:18] -rwx------. 1 boinc boinc      36322 Jan 12 09:53 runpilot2-wrapper.sh
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc       5112 Jan 12 09:53 queuedata.json
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc        100 Jan 12 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 16:42:18] -rwxr-xr-x. 1 boinc boinc       7986 Jan 12 10:52 run_atlas
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc        105 Jan 12 10:52 job.xml
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc       6390 Jan 12 10:52 init_data.xml
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc  320013126 Jan 12 10:52 EVNT.48118027._000155.pool.root.1
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc      15847 Jan 12 10:52 start_atlas.sh
[2026-01-13 16:42:18] drwxrwx--x. 2 boinc boinc         68 Jan 12 10:52 shared
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc     592611 Jan 12 10:52 input.tar.gz
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc          0 Jan 12 10:52 boinc_lockfile
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc       2896 Jan 12 10:53 pandaJob.out
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc     987688 Jan 12 10:57 agis_schedconf.cvmfs.json
[2026-01-13 16:42:18] drwx------. 5 boinc boinc       4096 Jan 12 10:57 pilot3
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc        534 Jan 13 16:13 boinc_task_state.xml
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc 1171956555 Jan 13 16:38 HITS.48187943._000753.pool.root.1
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc       1035 Jan 13 16:39 memory_monitor_summary.json
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc    1516246 Jan 13 16:39 agis_ddmendpoints.agis.ALL.json
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc    3056243 Jan 13 16:39 log.48187943._000753.job.log.tgz.1
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc         95 Jan 13 16:41 pilot_heartbeat.json
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc      28255 Jan 13 16:41 heartbeat.json
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc        819 Jan 13 16:42 pilotlog.txt
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc         30 Jan 13 16:42 wrapper_checkpoint.txt
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc   14144542 Jan 13 16:42 log.48187943._000753.job.log.1
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc       8192 Jan 13 16:42 boinc_mmap_file
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc        353 Jan 13 16:42 output.list
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc        620 Jan 13 16:42 runtime_log
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc   17244160 Jan 13 16:42 result.tar.gz
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc       8818 Jan 13 16:42 runtime_log.err
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc        664 Jan 13 16:42 4UmMDm2qSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0GnKDmW0Zy2n.diag
[2026-01-13 16:42:18] -rw-r--r--. 1 boinc boinc      21333 Jan 13 16:42 stderr.txt
[2026-01-13 16:42:18] HITS file was successfully produced:
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc 1171956555 Jan 13 16:38 shared/HITS.pool.root.1
[2026-01-13 16:42:18]  *** Contents of shared directory: ***
[2026-01-13 16:42:18] total 1474444
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc  320013126 Jan 12 10:52 ATLAS.root_0
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc      15847 Jan 12 10:52 start_atlas.sh
[2026-01-13 16:42:18] -rw-r--r--. 2 boinc boinc     592611 Jan 12 10:52 input.tar.gz
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc 1171956555 Jan 13 16:38 HITS.pool.root.1
[2026-01-13 16:42:18] -rw-------. 1 boinc boinc   17244160 Jan 13 16:42 result.tar.gz
16:42:20 (3217): run_atlas exited; CPU time 395250.649764
16:42:20 (3217): called boinc_finish(0)

</stderr_txt>
]]>

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