Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:36 (2952798): wrapper (7.7.26015): starting
05:01:36 (2952798): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 05:01:36] Arguments: --nthreads 8
[2026-01-12 05:01:36] Threads: 8
[2026-01-12 05:01:36] Checking for CVMFS
[2026-01-12 05:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 05:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 05:01:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 05:01:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 05:01:38] 2.13.3.0 12448 27055 232476 155047 0 186 30858077 40960000 25035 16776704 0 100882871 99.645 92929899 37510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 05:01:38] CVMFS is ok
[2026-01-12 05:01:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 05:01:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 05:01:38] Further information can be found at the LHC@home message board.
[2026-01-12 05:01:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 05:01:38] Checking for apptainer binary...
[2026-01-12 05:01:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 05:01:38] Running /usr/bin/apptainer --version
[2026-01-12 05:01:38] apptainer version 1.4.5-2.el9
[2026-01-12 05:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 05:01:38] c-212-19.aglt2.org
[2026-01-12 05:01:38] apptainer works
[2026-01-12 05:01:38] Set ATHENA_PROC_NUMBER=8
[2026-01-12 05:01:38] Set ATHENA_CORE_NUMBER=8
[2026-01-12 05:01:38] Starting ATLAS job with PandaID=6966870955
[2026-01-12 05:01:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:28:30]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:28:30] 2026-01-13 08:27:25,797 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 03:28:30] 2026-01-13 08:27:25,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 03:28:30] 2026-01-13 08:27:25,814 | INFO     | fitting pss+swap vs Time
[2026-01-13 03:28:30] 2026-01-13 08:27:25,815 | INFO     | sum of square deviations: 716411020111.3588
[2026-01-13 03:28:30] 2026-01-13 08:27:25,851 | INFO     | sum of deviations: 3866782663573.896
[2026-01-13 03:28:30] 2026-01-13 08:27:25,851 | INFO     | mean x: 1768252493.838124
[2026-01-13 03:28:30] 2026-01-13 08:27:25,851 | INFO     | mean y: 3403030.2518910742
[2026-01-13 03:28:30] 2026-01-13 08:27:25,851 | INFO     | intersect: -9540626718.106466
[2026-01-13 03:28:30] 2026-01-13 08:27:25,852 | INFO     | chi2: 11.513624167001122
[2026-01-13 03:28:30] 2026-01-13 08:27:25,854 | INFO     | sum of square deviations: 708313755186.4203
[2026-01-13 03:28:30] 2026-01-13 08:27:25,889 | INFO     | sum of deviations: 4415708169501.723
[2026-01-13 03:28:30] 2026-01-13 08:27:25,890 | INFO     | mean x: 1768252341.3470008
[2026-01-13 03:28:30] 2026-01-13 08:27:25,890 | INFO     | mean y: 3413369.718299165
[2026-01-13 03:28:30] 2026-01-13 08:27:25,890 | INFO     | intersect: -11020071988.647356
[2026-01-13 03:28:30] 2026-01-13 08:27:25,891 | INFO     | chi2: 8.147847021240347
[2026-01-13 03:28:30] 2026-01-13 08:27:25,891 | INFO     | current chi2=8.147847021240347 (change=29.232994728170265 %)
[2026-01-13 03:28:30] 2026-01-13 08:27:25,892 | INFO     | sum of square deviations: 700277747223.7734
[2026-01-13 03:28:30] 2026-01-13 08:27:25,933 | INFO     | sum of deviations: 4680795668514.629
[2026-01-13 03:28:30] 2026-01-13 08:27:25,933 | INFO     | mean x: 1768252188.855945
[2026-01-13 03:28:30] 2026-01-13 08:27:25,933 | INFO     | mean y: 3418400.0350609757
[2026-01-13 03:28:30] 2026-01-13 08:27:25,933 | INFO     | intersect: -11815930735.720873
[2026-01-13 03:28:30] 2026-01-13 08:27:25,935 | INFO     | chi2: 7.232348356634768
[2026-01-13 03:28:30] 2026-01-13 08:27:25,935 | INFO     | current chi2=7.232348356634768 (change=11.23608067528755 %)
[2026-01-13 03:28:30] 2026-01-13 08:27:25,935 | INFO     | right removable region: 1311
[2026-01-13 03:28:30] 2026-01-13 08:27:25,936 | INFO     | sum of square deviations: 708311869676.4218
[2026-01-13 03:28:30] 2026-01-13 08:27:25,970 | INFO     | sum of deviations: 3257478777117.066
[2026-01-13 03:28:30] 2026-01-13 08:27:25,970 | INFO     | mean x: 1768252646.3470008
[2026-01-13 03:28:30] 2026-01-13 08:27:25,970 | INFO     | mean y: 3414501.588458618
[2026-01-13 03:28:30] 2026-01-13 08:27:25,970 | INFO     | intersect: -8128660809.6551695
[2026-01-13 03:28:30] 2026-01-13 08:27:25,970 | INFO     | chi2: 7.573962597069427
[2026-01-13 03:28:30] 2026-01-13 08:27:25,971 | INFO     | current chi2=7.573962597069427 (change=34.21738900617453 %)
[2026-01-13 03:28:30] 2026-01-13 08:27:25,971 | INFO     | sum of square deviations: 700274056300.4852
[2026-01-13 03:28:30] 2026-01-13 08:27:25,996 | INFO     | sum of deviations: 2834053350303.043
[2026-01-13 03:28:30] 2026-01-13 08:27:25,996 | INFO     | mean x: 1768252798.855183
[2026-01-13 03:28:30] 2026-01-13 08:27:25,996 | INFO     | mean y: 3422529.4054878047
[2026-01-13 03:28:30] 2026-01-13 08:27:25,996 | INFO     | intersect: -7152808268.652126
[2026-01-13 03:28:30] 2026-01-13 08:27:25,997 | INFO     | chi2: 5.475718808567224
[2026-01-13 03:28:30] 2026-01-13 08:27:25,997 | INFO     | current chi2=5.475718808567224 (change=27.703381969618786 %)
[2026-01-13 03:28:30] 2026-01-13 08:27:25,998 | INFO     | sum of square deviations: 692297667500.9872
[2026-01-13 03:28:30] 2026-01-13 08:27:26,031 | INFO     | sum of deviations: 2733584234044.448
[2026-01-13 03:28:30] 2026-01-13 08:27:26,031 | INFO     | mean x: 1768252951.3596022
[2026-01-13 03:28:30] 2026-01-13 08:27:26,031 | INFO     | mean y: 3424450.01606733
[2026-01-13 03:28:30] 2026-01-13 08:27:26,031 | INFO     | intersect: -6978642103.9381695
[2026-01-13 03:28:30] 2026-01-13 08:27:26,032 | INFO     | chi2: 5.428080606936148
[2026-01-13 03:28:30] 2026-01-13 08:27:26,032 | INFO     | current chi2=5.428080606936148 (change=0.8699899190685679 %)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,032 | INFO     | left removable region: 30
[2026-01-13 03:28:30] 2026-01-13 08:27:26,033 | INFO     | sum of square deviations: 651798629772.6194
[2026-01-13 03:28:30] 2026-01-13 08:27:26,065 | INFO     | sum of deviations: 3353947323817.422
[2026-01-13 03:28:30] 2026-01-13 08:27:26,065 | INFO     | mean x: 1768253073.3895395
[2026-01-13 03:28:30] 2026-01-13 08:27:26,065 | INFO     | mean y: 3446022.5542544886
[2026-01-13 03:28:30] 2026-01-13 08:27:26,065 | INFO     | intersect: -9095418860.600965
[2026-01-13 03:28:30] 2026-01-13 08:27:26,066 | INFO     | chi2: 0.8512444043145206
[2026-01-13 03:28:30] 2026-01-13 08:27:26,067 | INFO     | current memory leak: 5.15 B/s (using 1281 data points, chi2=0.85)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | could have reported an average CPU frequency of 3274 MHz (48 samples)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | ..............................
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . Timing measurements:
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . get job = 0 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . initial setup = 3 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . payload setup = 33 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . stage-in = 0 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . payload execution = 80638 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . stage-out = 4 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | . log creation = 0 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,068 | INFO     | ..............................
[2026-01-13 03:28:30] 2026-01-13 08:27:26,106 | INFO     | time since job start (80723s) is within the limit (349056.0s)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | 
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | job summary report
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | --------------------------------------------------
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | PanDA job id: 6966870955
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | task id: 48187943
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | errors: (none)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | pilot state: finished 
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | transexitcode: 0
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | exeerrorcode: 0
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | exeerrordiag: 
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | exitcode: 0
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | exitmsg: OK
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | cpuconsumptiontime: 236132 s
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | nevents: 2050
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | neventsw: 0
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | pid: 2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | pgrp: 2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | corecount: 8
[2026-01-13 03:28:30] 2026-01-13 08:27:26,132 | INFO     | event service: False
[2026-01-13 03:28:30] 2026-01-13 08:27:26,133 | INFO     | sizes: {0: 2284623, 11: 2284623, 14: 2284913, 22: 2284941, 80675: 2366857, 80680: 2375855, 80682: 2376039, 80689: 2376285}
[2026-01-13 03:28:30] 2026-01-13 08:27:26,133 | INFO     | --------------------------------------------------
[2026-01-13 03:28:30] 2026-01-13 08:27:26,133 | INFO     | 
[2026-01-13 03:28:30] 2026-01-13 08:27:26,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-13 03:28:30] 2026-01-13 08:27:26,148 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,148 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,150 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 03:28:30] 2026-01-13 08:27:26,150 | INFO     | job 6966870955 has completed (purged errors)
[2026-01-13 03:28:30] 2026-01-13 08:27:26,150 | INFO     | overall cleanup function is called
[2026-01-13 03:28:30] 2026-01-13 08:27:27,166 | INFO     | --- collectZombieJob: --- 10, [2984201]
[2026-01-13 03:28:30] 2026-01-13 08:27:27,166 | INFO     | zombie collector waiting for pid 2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:27,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 03:28:30] 2026-01-13 08:27:27,166 | INFO     | collected zombie processes
[2026-01-13 03:28:30] 2026-01-13 08:27:27,166 | INFO     | will attempt to kill all subprocesses of pid=2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:27,617 | INFO     | process IDs to be killed: [2984201] (in reverse order)
[2026-01-13 03:28:30] 2026-01-13 08:27:27,757 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 03:28:30] 2026-01-13 08:27:27,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 03:28:30] 2026-01-13 08:27:27,778 | INFO     | did not find any defunct processes belonging to 2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:27,798 | INFO     | did not find any defunct processes belonging to 2984201
[2026-01-13 03:28:30] 2026-01-13 08:27:27,799 | INFO     | ready for new job
[2026-01-13 03:28:30] 2026-01-13 08:27:27,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 03:28:30] 2026-01-13 08:27:27,805 | INFO     | ***************************************
[2026-01-13 03:28:30] 2026-01-13 08:27:27,805 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 03:28:30] 2026-01-13 08:27:27,805 | INFO     | ***************************************
[2026-01-13 03:28:30] 2026-01-13 08:27:27,805 | INFO     | 
[2026-01-13 03:28:30] 2026-01-13 08:27:27,810 | INFO     | architecture information:
[2026-01-13 03:28:30] 2026-01-13 08:27:27,811 | INFO     | executing command: cat /etc/os-release
[2026-01-13 03:28:30] 2026-01-13 08:27:27,828 | INFO     | cat /etc/os-release:
[2026-01-13 03:28:30] NAME="CentOS Linux"
[2026-01-13 03:28:30] VERSION="7 (Core)"
[2026-01-13 03:28:30] ID="centos"
[2026-01-13 03:28:30] ID_LIKE="rhel fedora"
[2026-01-13 03:28:30] VERSION_ID="7"
[2026-01-13 03:28:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 03:28:30] ANSI_COLOR="0;31"
[2026-01-13 03:28:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 03:28:30] HOME_URL="https://www.centos.org/"
[2026-01-13 03:28:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 03:28:30] 
[2026-01-13 03:28:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 03:28:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 03:28:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 03:28:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 03:28:30] 
[2026-01-13 03:28:30] 2026-01-13 08:27:27,828 | INFO     | ***************************************
[2026-01-13 03:28:30] 2026-01-13 08:27:28,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-13 03:28:30] 2026-01-13 08:27:28,349 | INFO     | sufficient remaining disk space (125698048000 B)
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | INFO     | update_server=False
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:28:30] 2026-01-13 08:27:28,350 | INFO     | aborting loop
[2026-01-13 03:28:30] 2026-01-13 08:27:28,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 03:28:30] 2026-01-13 08:27:29,325 | INFO     | all data control threads have been joined
[2026-01-13 03:28:30] 2026-01-13 08:27:29,355 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:29,356 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:29,552 | INFO     | all payload control threads have been joined
[2026-01-13 03:28:30] 2026-01-13 08:27:29,588 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:29,652 | INFO     | all job control threads have been joined
[2026-01-13 03:28:30] 2026-01-13 08:27:29,699 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:29,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:29,963 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,027 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,041 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,113 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,336 | INFO     | [data] control thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:28:30] 2026-01-13 08:27:30,475 | INFO     | [job] validate thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,522 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,557 | INFO     | [payload] control thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:30,657 | INFO     | [job] control thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:31,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:28:30] 2026-01-13 08:27:32,152 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:34,359 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:28:30] 2026-01-13 08:27:59,846 | INFO     | PID=2963137 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 03:28:30] 2026-01-13 08:27:59,846 | INFO     | .. there are 30 such processes running
[2026-01-13 03:28:30] 2026-01-13 08:27:59,848 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:28:30] 2026-01-13 08:27:59,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:28:30] 2026-01-13 08:27:59,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:28:30] 2026-01-13 08:28:23,443 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:28:30] 2026-01-13 08:28:24,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793306838848)>', '<ExcThread(monitor, started 139792855590656)>']
[2026-01-13 03:28:30] 2026-01-13 08:28:25,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:28:30] 2026-01-13 08:28:25,015 | INFO     | [monitor] control thread has ended
[2026-01-13 03:28:30] 2026-01-13 08:28:29,525 | INFO     | all workflow threads have been joined
[2026-01-13 03:28:30] 2026-01-13 08:28:29,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:28:30] 2026-01-13 08:28:29,526 | INFO     | traces error code: 0
[2026-01-13 03:28:30] 2026-01-13 08:28:29,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:28:30] 2026-01-13 08:28:29,718 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:28:30] 2026-01-13 08:28:29,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:28:30] 2026-01-13 08:28:29,726 [wrapper] pilotpid: 2963137
[2026-01-13 03:28:30] 2026-01-13 08:28:29,730 [wrapper] Pilot exit status: 0
[2026-01-13 03:28:30] 2026-01-13 08:28:29,744 [wrapper] pandaids: 6966870955
[2026-01-13 03:28:30] 2026-01-13 08:28:29,878 [wrapper] cleanup supervisor_pilot 3496852 2963138
[2026-01-13 03:28:30] 2026-01-13 08:28:29,884 [wrapper] Test setup, not cleaning
[2026-01-13 03:28:30] 2026-01-13 08:28:29,887 [wrapper] apfmon messages muted
[2026-01-13 03:28:30] 2026-01-13 08:28:29,889 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:28:30] 2026-01-13 08:28:29,891 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:28:30]  *** Error codes and diagnostics ***
[2026-01-13 03:28:30]     "exeErrorCode": 0,
[2026-01-13 03:28:30]     "exeErrorDiag": "",
[2026-01-13 03:28:30]     "pilotErrorCode": 0,
[2026-01-13 03:28:30]     "pilotErrorDiag": "",
[2026-01-13 03:28:30]  *** Listing of results directory ***
[2026-01-13 03:28:30] total 1506612
[2026-01-13 03:28:30] -rwx------. 1 boincer umatlas      36322 Jan 12 04:10 runpilot2-wrapper.sh
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:10 queuedata.json
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:10 pilot3.tar.gz
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas        100 Jan 12 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:28:30] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 05:01 run_atlas
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas        105 Jan 12 05:01 job.xml
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas  323301935 Jan 12 05:01 EVNT.48118027._000485.pool.root.1
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 05:01 start_atlas.sh
[2026-01-13 03:28:30] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 05:01 shared
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 05:01 input.tar.gz
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas          0 Jan 12 05:01 boinc_lockfile
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 05:01 pandaJob.out
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas         57 Jan 12 05:01 setup.sh.local
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas     987688 Jan 12 05:02 agis_schedconf.cvmfs.json
[2026-01-13 03:28:30] drwx------. 5 boincer umatlas       4096 Jan 12 05:02 pilot3
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas        533 Jan 13 03:08 boinc_task_state.xml
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas       6958 Jan 13 03:21 init_data.xml
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas 1189478248 Jan 13 03:26 HITS.48187943._002365.pool.root.1
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas       1075 Jan 13 03:27 memory_monitor_summary.json
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas    1516240 Jan 13 03:27 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas    2750294 Jan 13 03:27 log.48187943._002365.job.log.tgz.1
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas      27928 Jan 13 03:27 heartbeat.json
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas         95 Jan 13 03:27 pilot_heartbeat.json
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas         29 Jan 13 03:28 wrapper_checkpoint.txt
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 03:28 boinc_mmap_file
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas       4825 Jan 13 03:28 pilotlog.txt
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas   10268119 Jan 13 03:28 log.48187943._002365.job.log.1
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas        353 Jan 13 03:28 output.list
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas        620 Jan 13 03:28 runtime_log
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas   13056000 Jan 13 03:28 result.tar.gz
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas       9343 Jan 13 03:28 runtime_log.err
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas        668 Jan 13 03:28 Jp7NDmm7Sz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzYnKDmf5RZ7m.diag
[2026-01-13 03:28:30] -rw-r--r--. 1 boincer umatlas      21026 Jan 13 03:28 stderr.txt
[2026-01-13 03:28:30] HITS file was successfully produced:
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas 1189478248 Jan 13 03:26 shared/HITS.pool.root.1
[2026-01-13 03:28:30]  *** Contents of shared directory: ***
[2026-01-13 03:28:30] total 1490680
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas  323301935 Jan 12 05:01 ATLAS.root_0
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 05:01 start_atlas.sh
[2026-01-13 03:28:30] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 05:01 input.tar.gz
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas 1189478248 Jan 13 03:26 HITS.pool.root.1
[2026-01-13 03:28:30] -rw-------. 1 boincer umatlas   13056000 Jan 13 03:28 result.tar.gz
03:28:31 (2952798): run_atlas exited; CPU time 236109.323045
03:28:31 (2952798): called boinc_finish(0)

</stderr_txt>
]]>

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