Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:01:23 (434742): wrapper (7.7.26015): starting
06:01:23 (434742): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 06:01:23] Arguments: --nthreads 8
[2026-01-12 06:01:23] Threads: 8
[2026-01-12 06:01:23] Checking for CVMFS
[2026-01-12 06:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 06:01:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 06:01:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 06:01:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 06:01:25] 2.13.3.0 10223 97621 168824 155049 0 126 38252688 40960001 34267 16776704 0 1023105262 99.688 847543466 51049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 06:01:25] CVMFS is ok
[2026-01-12 06:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 06:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 06:01:25] Further information can be found at the LHC@home message board.
[2026-01-12 06:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 06:01:25] Checking for apptainer binary...
[2026-01-12 06:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 06:01:25] Running /usr/bin/apptainer --version
[2026-01-12 06:01:25] apptainer version 1.4.5-2.el9
[2026-01-12 06:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 06:01:26] c8-7-6.aglt2.org
[2026-01-12 06:01:26] apptainer works
[2026-01-12 06:01:27] Set ATHENA_PROC_NUMBER=8
[2026-01-12 06:01:27] Set ATHENA_CORE_NUMBER=8
[2026-01-12 06:01:27] Starting ATLAS job with PandaID=6966871022
[2026-01-12 06:01:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 16:56:53]  *** The last 200 lines of the pilot log: ***
[2026-01-12 16:56:53] 2026-01-12 21:55:50,183 | INFO     | job 6966871022 has state=finished
[2026-01-12 16:56:53] 2026-01-12 21:55:50,183 | INFO     | preparing for final server update for job 6966871022 in state='finished'
[2026-01-12 16:56:53] 2026-01-12 21:55:50,183 | INFO     | this job has now completed (state=finished)
[2026-01-12 16:56:53] 2026-01-12 21:55:50,183 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 16:56:53] 2026-01-12 21:55:50,184 | INFO     | log transfer has been attempted: DONE
[2026-01-12 16:56:53] 2026-01-12 21:55:50,184 | INFO     | job 6966871022 has finished - writing final server update
[2026-01-12 16:56:53] 2026-01-12 21:55:50,184 | INFO     | total number of processed events: 2050 (read)
[2026-01-12 16:56:53] 2026-01-12 21:55:50,192 | INFO     | executing command: lscpu
[2026-01-12 16:56:53] 2026-01-12 21:55:50,245 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 16:56:53] 2026-01-12 21:55:50,443 | INFO     | time since job start (39191s) is within the limit (349056.0s)
[2026-01-12 16:56:53] 2026-01-12 21:55:50,443 | INFO     | 39196s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 16:56:53] 2026-01-12 21:55:51,713 | INFO     | monitor loop #2447: job 0:6966871022 is in state 'finished'
[2026-01-12 16:56:53] 2026-01-12 21:55:51,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 16:56:53] 2026-01-12 21:55:52,448 | INFO     | time since job start (39193s) is within the limit (349056.0s)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,216 | INFO     | monitor loop #2448: job 0:6966871022 is in state 'finished'
[2026-01-12 16:56:53] 2026-01-12 21:55:54,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,278 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 16:56:53] 2026-01-12 21:55:54,283 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.3505390625014
[2026-01-12 16:56:53] 2026-01-12 21:55:54,295 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6966871022/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,296 | INFO     | extracted standard info from prmon json
[2026-01-12 16:56:53] 2026-01-12 21:55:54,296 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 16:56:53] 2026-01-12 21:55:54,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 16:56:53] 2026-01-12 21:55:54,303 | INFO     | fitting pss+swap vs Time
[2026-01-12 16:56:53] 2026-01-12 21:55:54,304 | INFO     | sum of square deviations: 81275295667.6734
[2026-01-12 16:56:53] 2026-01-12 21:55:54,309 | INFO     | sum of deviations: 1824707425859.6338
[2026-01-12 16:56:53] 2026-01-12 21:55:54,309 | INFO     | mean x: 1768235432.3859375
[2026-01-12 16:56:53] 2026-01-12 21:55:54,309 | INFO     | mean y: 3339125.0703125
[2026-01-12 16:56:53] 2026-01-12 21:55:54,309 | INFO     | intersect: -39695222382.91396
[2026-01-12 16:56:53] 2026-01-12 21:55:54,309 | INFO     | chi2: 23.403810327556283
[2026-01-12 16:56:53] 2026-01-12 21:55:54,310 | INFO     | sum of square deviations: 79385748916.57652
[2026-01-12 16:56:53] 2026-01-12 21:55:54,314 | INFO     | sum of deviations: 1994550502846.43
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | mean x: 1768235279.9165354
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | mean y: 3352796.159055118
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | intersect: -44423192457.1274
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | chi2: 21.50295856588191
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | current chi2=21.50295856588191 (change=8.121975588890567 %)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | right removable region: 634
[2026-01-12 16:56:53] 2026-01-12 21:55:54,315 | INFO     | sum of square deviations: 79384231846.57649
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | sum of deviations: 1499566135697.3965
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | mean x: 1768235584.9165354
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | mean y: 3365350.781102362
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | intersect: -33398560212.982685
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | chi2: 17.570845110864845
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | current chi2=17.570845110864845 (change=24.92314343286036 %)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,320 | INFO     | left removable region: 10
[2026-01-12 16:56:53] 2026-01-12 21:55:54,321 | INFO     | sum of square deviations: 75329311093.83913
[2026-01-12 16:56:53] 2026-01-12 21:55:54,325 | INFO     | sum of deviations: 1363231593719.6206
[2026-01-12 16:56:53] 2026-01-12 21:55:54,326 | INFO     | mean x: 1768235554.4839745
[2026-01-12 16:56:53] 2026-01-12 21:55:54,326 | INFO     | mean y: 3404268.362179487
[2026-01-12 16:56:53] 2026-01-12 21:55:54,326 | INFO     | intersect: -31996285334.6406
[2026-01-12 16:56:53] 2026-01-12 21:55:54,326 | INFO     | chi2: 10.67741619229263
[2026-01-12 16:56:53] 2026-01-12 21:55:54,326 | INFO     | current memory leak: 18.10 B/s (using 624 data points, chi2=10.68)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | could have reported an average CPU frequency of 3797 MHz (25 samples)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | ..............................
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . Timing measurements:
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . get job = 0 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . initial setup = 5 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . payload setup = 76 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . stage-in = 0 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . payload execution = 39031 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . stage-out = 3 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | . log creation = 0 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,327 | INFO     | ..............................
[2026-01-12 16:56:53] 2026-01-12 21:55:54,453 | INFO     | time since job start (39195s) is within the limit (349056.0s)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | 
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | job summary report
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | --------------------------------------------------
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | PanDA job id: 6966871022
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | task id: 48187943
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | errors: (none)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | pilot state: finished 
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | transexitcode: 0
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | exeerrorcode: 0
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | exeerrordiag: 
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | exitcode: 0
[2026-01-12 16:56:53] 2026-01-12 21:55:54,519 | INFO     | exitmsg: OK
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | cpuconsumptiontime: 165042 s
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | nevents: 2050
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | neventsw: 0
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | pid: 472690
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | pgrp: 472690
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | corecount: 8
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | event service: False
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | sizes: {0: 2284452, 1: 2284651, 12: 2284651, 23: 2284679, 33: 2285025, 44: 2285025, 39111: 2347064, 39112: 2347063, 39115: 2356117, 39116: 2356173, 39121: 2356483}
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | --------------------------------------------------
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | 
[2026-01-12 16:56:53] 2026-01-12 21:55:54,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | job 6966871022 has completed (purged errors)
[2026-01-12 16:56:53] 2026-01-12 21:55:54,535 | INFO     | overall cleanup function is called
[2026-01-12 16:56:53] 2026-01-12 21:55:55,550 | INFO     | --- collectZombieJob: --- 10, [472690]
[2026-01-12 16:56:53] 2026-01-12 21:55:55,550 | INFO     | zombie collector waiting for pid 472690
[2026-01-12 16:56:53] 2026-01-12 21:55:55,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 16:56:53] 2026-01-12 21:55:55,550 | INFO     | collected zombie processes
[2026-01-12 16:56:53] 2026-01-12 21:55:55,550 | INFO     | will attempt to kill all subprocesses of pid=472690
[2026-01-12 16:56:53] 2026-01-12 21:55:56,005 | INFO     | process IDs to be killed: [472690] (in reverse order)
[2026-01-12 16:56:53] 2026-01-12 21:55:56,176 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 16:56:53] 2026-01-12 21:55:56,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 16:56:53] 2026-01-12 21:55:56,203 | INFO     | did not find any defunct processes belonging to 472690
[2026-01-12 16:56:53] 2026-01-12 21:55:56,229 | INFO     | did not find any defunct processes belonging to 472690
[2026-01-12 16:56:53] 2026-01-12 21:55:56,229 | INFO     | ready for new job
[2026-01-12 16:56:53] 2026-01-12 21:55:56,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 16:56:53] 2026-01-12 21:55:56,232 | INFO     | ***************************************
[2026-01-12 16:56:53] 2026-01-12 21:55:56,233 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 16:56:53] 2026-01-12 21:55:56,233 | INFO     | ***************************************
[2026-01-12 16:56:53] 2026-01-12 21:55:56,233 | INFO     | 
[2026-01-12 16:56:53] 2026-01-12 21:55:56,237 | INFO     | architecture information:
[2026-01-12 16:56:53] 2026-01-12 21:55:56,238 | INFO     | executing command: cat /etc/os-release
[2026-01-12 16:56:53] 2026-01-12 21:55:56,251 | INFO     | cat /etc/os-release:
[2026-01-12 16:56:53] NAME="CentOS Linux"
[2026-01-12 16:56:53] VERSION="7 (Core)"
[2026-01-12 16:56:53] ID="centos"
[2026-01-12 16:56:53] ID_LIKE="rhel fedora"
[2026-01-12 16:56:53] VERSION_ID="7"
[2026-01-12 16:56:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 16:56:53] ANSI_COLOR="0;31"
[2026-01-12 16:56:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 16:56:53] HOME_URL="https://www.centos.org/"
[2026-01-12 16:56:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 16:56:53] 
[2026-01-12 16:56:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 16:56:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 16:56:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 16:56:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 16:56:53] 
[2026-01-12 16:56:53] 2026-01-12 21:55:56,251 | INFO     | ***************************************
[2026-01-12 16:56:53] 2026-01-12 21:55:56,754 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | INFO     | sufficient remaining disk space (168803958784 B)
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | INFO     | update_server=False
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 16:56:53] 2026-01-12 21:55:56,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 16:56:53] 2026-01-12 21:55:56,990 | INFO     | all payload control threads have been joined
[2026-01-12 16:56:53] 2026-01-12 21:55:57,565 | INFO     | all job control threads have been joined
[2026-01-12 16:56:53] 2026-01-12 21:55:57,591 | INFO     | all data control threads have been joined
[2026-01-12 16:56:53] 2026-01-12 21:55:57,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:56:53] 2026-01-12 21:55:57,724 | INFO     | aborting loop
[2026-01-12 16:56:53] 2026-01-12 21:55:57,775 | INFO     | [job] retrieve thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:57,995 | INFO     | [payload] control thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,141 | INFO     | [data] copytool_in thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,388 | INFO     | [payload] validate_post thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,401 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,508 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,570 | INFO     | [job] control thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,596 | INFO     | [data] control thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,729 | INFO     | [job] job monitor thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,775 | INFO     | [data] copytool_out thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,812 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:58,989 | INFO     | [job] validate thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:59,026 | INFO     | [payload] failed_post thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:55:59,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:56:53] 2026-01-12 21:55:59,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 16:56:53] 2026-01-12 21:56:00,398 | INFO     | [job] queue monitor thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:56:03,550 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:56:07,031 | INFO     | job.realtimelogging is not enabled
[2026-01-12 16:56:53] 2026-01-12 21:56:08,037 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 16:56:53] 2026-01-12 21:56:28,142 | INFO     | PID=455609 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 16:56:53] 2026-01-12 21:56:28,144 | INFO     | .. there are 34 such processes running
[2026-01-12 16:56:53] 2026-01-12 21:56:28,145 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 16:56:53] 2026-01-12 21:56:28,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 16:56:53] 2026-01-12 21:56:28,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 16:56:53] 2026-01-12 21:56:46,717 | INFO     | [monitor] cgroup control has ended
[2026-01-12 16:56:53] 2026-01-12 21:56:48,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644790257472)>', '<ExcThread(monitor, started 139644083631872)>']
[2026-01-12 16:56:53] 2026-01-12 21:56:49,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 16:56:53] 2026-01-12 21:56:49,248 | INFO     | [monitor] control thread has ended
[2026-01-12 16:56:53] 2026-01-12 21:56:53,338 | INFO     | all workflow threads have been joined
[2026-01-12 16:56:53] 2026-01-12 21:56:53,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 16:56:53] 2026-01-12 21:56:53,339 | INFO     | traces error code: 0
[2026-01-12 16:56:53] 2026-01-12 21:56:53,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 16:56:53] 2026-01-12 21:56:53,432 [wrapper] ==== pilot stdout END ====
[2026-01-12 16:56:53] 2026-01-12 21:56:53,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 16:56:53] 2026-01-12 21:56:53,438 [wrapper] pilotpid: 455609
[2026-01-12 16:56:53] 2026-01-12 21:56:53,440 [wrapper] Pilot exit status: 0
[2026-01-12 16:56:53] 2026-01-12 21:56:53,450 [wrapper] pandaids: 6966871022
[2026-01-12 16:56:53] 2026-01-12 21:56:53,560 [wrapper] cleanup supervisor_pilot 4178240 455610
[2026-01-12 16:56:53] 2026-01-12 21:56:53,563 [wrapper] Test setup, not cleaning
[2026-01-12 16:56:53] 2026-01-12 21:56:53,565 [wrapper] apfmon messages muted
[2026-01-12 16:56:53] 2026-01-12 21:56:53,566 [wrapper] ==== wrapper stdout END ====
[2026-01-12 16:56:53] 2026-01-12 21:56:53,568 [wrapper] ==== wrapper stderr END ====
[2026-01-12 16:56:53]  *** Error codes and diagnostics ***
[2026-01-12 16:56:53]     "exeErrorCode": 0,
[2026-01-12 16:56:53]     "exeErrorDiag": "",
[2026-01-12 16:56:53]     "pilotErrorCode": 0,
[2026-01-12 16:56:53]     "pilotErrorDiag": "",
[2026-01-12 16:56:53]  *** Listing of results directory ***
[2026-01-12 16:56:53] total 1491344
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:10 queuedata.json
[2026-01-12 16:56:53] -rwx------. 1 boincer umatlas      36322 Jan 12 04:10 runpilot2-wrapper.sh
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:10 pilot3.tar.gz
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas        100 Jan 12 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 16:56:53] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 06:01 run_atlas
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas        105 Jan 12 06:01 job.xml
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas  322376265 Jan 12 06:01 EVNT.48118027._000498.pool.root.1
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 06:01 start_atlas.sh
[2026-01-12 16:56:53] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 06:01 shared
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 06:01 input.tar.gz
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas          0 Jan 12 06:01 boinc_lockfile
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 06:01 pandaJob.out
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas         57 Jan 12 06:01 setup.sh.local
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas     987696 Jan 12 06:02 agis_schedconf.cvmfs.json
[2026-01-12 16:56:53] drwx------. 5 boincer umatlas       4096 Jan 12 06:02 pilot3
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas        533 Jan 12 16:51 boinc_task_state.xml
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas 1186234281 Jan 12 16:55 HITS.48187943._002428.pool.root.1
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas       1049 Jan 12 16:55 memory_monitor_summary.json
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas    1516240 Jan 12 16:55 agis_ddmendpoints.agis.ALL.json
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas    2204639 Jan 12 16:55 log.48187943._002428.job.log.tgz.1
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas      27317 Jan 12 16:55 heartbeat.json
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas         95 Jan 12 16:55 pilot_heartbeat.json
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas       7174 Jan 12 16:56 init_data.xml
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 16:56 boinc_mmap_file
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas         29 Jan 12 16:56 wrapper_checkpoint.txt
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas       4896 Jan 12 16:56 pilotlog.txt
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas    5081995 Jan 12 16:56 log.48187943._002428.job.log.1
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas        353 Jan 12 16:56 output.list
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas        620 Jan 12 16:56 runtime_log
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas    7321600 Jan 12 16:56 result.tar.gz
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas       9333 Jan 12 16:56 runtime_log.err
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas        659 Jan 12 16:56 DWZNDmx7Sz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjthKDmDDFOim.diag
[2026-01-12 16:56:53] -rw-r--r--. 1 boincer umatlas      21639 Jan 12 16:56 stderr.txt
[2026-01-12 16:56:53] HITS file was successfully produced:
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas 1186234281 Jan 12 16:55 shared/HITS.pool.root.1
[2026-01-12 16:56:53]  *** Contents of shared directory: ***
[2026-01-12 16:56:53] total 1481008
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas  322376265 Jan 12 06:01 ATLAS.root_0
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 06:01 start_atlas.sh
[2026-01-12 16:56:53] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 06:01 input.tar.gz
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas 1186234281 Jan 12 16:55 HITS.pool.root.1
[2026-01-12 16:56:53] -rw-------. 1 boincer umatlas    7321600 Jan 12 16:56 result.tar.gz
16:56:54 (434742): run_atlas exited; CPU time 165568.714682
16:56:54 (434742): called boinc_finish(0)

</stderr_txt>
]]>

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