Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:04 (16139): wrapper (7.7.26015): starting
10:39:04 (16139): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 10:39:04] Arguments: --nthreads 8
[2026-01-12 10:39:04] Threads: 8
[2026-01-12 10:39:04] Checking for CVMFS
[2026-01-12 10:39:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 10:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 10:39:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 10:39:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 10:39:07] 2.11.2.0 31778 7823 75692 155047 3 11 17487542 25165825 899 130560 0 1531401 99.702 387601 895 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 10:39:07] CVMFS is ok
[2026-01-12 10:39:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 10:39:07] Checking for apptainer binary...
[2026-01-12 10:39:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 10:39:07] Running /usr/bin/apptainer --version
[2026-01-12 10:39:08] apptainer version 1.3.2-1.el7
[2026-01-12 10:39:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 10:39:20] cg-vwn373.simple-grid.lan
[2026-01-12 10:39:20] apptainer works
[2026-01-12 10:39:21] Set ATHENA_PROC_NUMBER=8
[2026-01-12 10:39:21] Set ATHENA_CORE_NUMBER=8
[2026-01-12 10:39:21] Starting ATLAS job with PandaID=6966868419
[2026-01-12 10:39:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 15:34:05]  *** The last 200 lines of the pilot log: ***
[2026-01-13 15:34:05] 2026-01-13 14:33:24,682 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 15:34:05] 2026-01-13 14:33:24,682 | INFO     | log transfer has been attempted: DONE
[2026-01-13 15:34:05] 2026-01-13 14:33:24,682 | INFO     | job 6966868419 has finished - writing final server update
[2026-01-13 15:34:05] 2026-01-13 14:33:24,682 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 15:34:05] 2026-01-13 14:33:24,683 | INFO     | executing command: lscpu
[2026-01-13 15:34:05] 2026-01-13 14:33:24,713 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 15:34:05] 2026-01-13 14:33:25,687 | INFO     | time since job start (103773s) is within the limit (349056.0s)
[2026-01-13 15:34:05] 2026-01-13 14:33:26,110 | INFO     | monitor loop #7002: job 0:6966868419 is in state 'finished'
[2026-01-13 15:34:05] 2026-01-13 14:33:26,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 15:34:05] 2026-01-13 14:33:27,693 | INFO     | time since job start (103775s) is within the limit (349056.0s)
[2026-01-13 15:34:05] 2026-01-13 14:33:28,613 | INFO     | monitor loop #7003: job 0:6966868419 is in state 'finished'
[2026-01-13 15:34:05] 2026-01-13 14:33:28,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 15:34:05] 2026-01-13 14:33:29,700 | INFO     | time since job start (103777s) is within the limit (349056.0s)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,116 | INFO     | monitor loop #7004: job 0:6966868419 is in state 'finished'
[2026-01-13 15:34:05] 2026-01-13 14:33:31,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,461 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 15:34:05] 2026-01-13 14:33:31,462 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-13 15:34:05] 2026-01-13 14:33:31,464 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6966868419/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,465 | INFO     | extracted standard info from prmon json
[2026-01-13 15:34:05] 2026-01-13 14:33:31,465 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 15:34:05] 2026-01-13 14:33:31,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 15:34:05] 2026-01-13 14:33:31,498 | INFO     | fitting pss+swap vs Time
[2026-01-13 15:34:05] 2026-01-13 14:33:31,501 | INFO     | sum of square deviations: 1494054016385.8867
[2026-01-13 15:34:05] 2026-01-13 14:33:31,584 | INFO     | sum of deviations: 9687352328924.832
[2026-01-13 15:34:05] 2026-01-13 14:33:31,585 | INFO     | mean x: 1768263284.918887
[2026-01-13 15:34:05] 2026-01-13 14:33:31,585 | INFO     | mean y: 3385977.465956187
[2026-01-13 15:34:05] 2026-01-13 14:33:31,585 | INFO     | intersect: -11461922012.367086
[2026-01-13 15:34:05] 2026-01-13 14:33:31,587 | INFO     | chi2: 34.63544603484212
[2026-01-13 15:34:05] 2026-01-13 14:33:31,590 | INFO     | sum of square deviations: 1480825013786.653
[2026-01-13 15:34:05] 2026-01-13 14:33:31,670 | INFO     | sum of deviations: 10392926369405.361
[2026-01-13 15:34:05] 2026-01-13 14:33:31,671 | INFO     | mean x: 1768263132.4216151
[2026-01-13 15:34:05] 2026-01-13 14:33:31,671 | INFO     | mean y: 3394110.5558194774
[2026-01-13 15:34:05] 2026-01-13 14:33:31,671 | INFO     | intersect: -12406869334.412987
[2026-01-13 15:34:05] 2026-01-13 14:33:31,673 | INFO     | chi2: 31.36309843688482
[2026-01-13 15:34:05] 2026-01-13 14:33:31,673 | INFO     | current chi2=31.36309843688482 (change=9.447973023547684 %)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,673 | INFO     | right removable region: 1683
[2026-01-13 15:34:05] 2026-01-13 14:33:31,676 | INFO     | sum of square deviations: 1480824067066.654
[2026-01-13 15:34:05] 2026-01-13 14:33:31,710 | INFO     | time since job start (103779s) is within the limit (349056.0s)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,758 | INFO     | sum of deviations: 8815643741478.633
[2026-01-13 15:34:05] 2026-01-13 14:33:31,758 | INFO     | mean x: 1768263437.4216151
[2026-01-13 15:34:05] 2026-01-13 14:33:31,758 | INFO     | mean y: 3396025.7511876486
[2026-01-13 15:34:05] 2026-01-13 14:33:31,758 | INFO     | intersect: -10523432145.180815
[2026-01-13 15:34:05] 2026-01-13 14:33:31,761 | INFO     | chi2: 29.168805041813943
[2026-01-13 15:34:05] 2026-01-13 14:33:31,761 | INFO     | current chi2=29.168805041813943 (change=15.783371138136678 %)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,761 | INFO     | left removable region: 10
[2026-01-13 15:34:05] 2026-01-13 14:33:31,763 | INFO     | sum of square deviations: 1451994698396.249
[2026-01-13 15:34:05] 2026-01-13 14:33:31,843 | INFO     | sum of deviations: 8792746260727.315
[2026-01-13 15:34:05] 2026-01-13 14:33:31,844 | INFO     | mean x: 1768263406.9276748
[2026-01-13 15:34:05] 2026-01-13 14:33:31,844 | INFO     | mean y: 3415948.870292887
[2026-01-13 15:34:05] 2026-01-13 14:33:31,844 | INFO     | intersect: -10704537376.590982
[2026-01-13 15:34:05] 2026-01-13 14:33:31,846 | INFO     | chi2: 19.877388282675753
[2026-01-13 15:34:05] 2026-01-13 14:33:31,847 | INFO     | current memory leak: 6.06 B/s (using 1673 data points, chi2=19.88)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,848 | INFO     | could have reported an average CPU frequency of 1999 MHz (56 samples)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,848 | INFO     | ..............................
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . Timing measurements:
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . get job = 0 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . initial setup = 12 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . payload setup = 361 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . stage-in = 0 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . payload execution = 103181 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . stage-out = 4 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | . log creation = 1 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,849 | INFO     | ..............................
[2026-01-13 15:34:05] 2026-01-13 14:33:31,978 | INFO     | 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,978 | INFO     | job summary report
[2026-01-13 15:34:05] 2026-01-13 14:33:31,978 | INFO     | --------------------------------------------------
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | PanDA job id: 6966868419
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | task id: 48187943
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | errors: (none)
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | pilot state: finished 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | transexitcode: 0
[2026-01-13 15:34:05] 2026-01-13 14:33:31,979 | INFO     | exeerrorcode: 0
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | exeerrordiag: 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | exitcode: 0
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | exitmsg: OK
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | cpuconsumptiontime: 392702 s
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | nevents: 2050
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | neventsw: 0
[2026-01-13 15:34:05] 2026-01-13 14:33:31,980 | INFO     | pid: 27214
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | pgrp: 27214
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | corecount: 8
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | event service: False
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | sizes: {0: 2284397, 1: 2284652, 12: 2284652, 23: 2284680, 34: 2284708, 44: 2284736, 55: 2284892, 66: 2284920, 77: 2284948, 87: 2285004, 98: 2285032, 109: 2285340, 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | --------------------------------------------------
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | 
[2026-01-13 15:34:05] 2026-01-13 14:33:31,981 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-13 15:34:05] 2026-01-13 14:33:32,024 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 15:34:05] 2026-01-13 14:33:32,027 | INFO     | job 6966868419 has completed (purged errors)
[2026-01-13 15:34:05] 2026-01-13 14:33:32,027 | INFO     | overall cleanup function is called
[2026-01-13 15:34:05] 2026-01-13 14:33:33,045 | INFO     | --- collectZombieJob: --- 10, [27214]
[2026-01-13 15:34:05] 2026-01-13 14:33:33,046 | INFO     | zombie collector waiting for pid 27214
[2026-01-13 15:34:05] 2026-01-13 14:33:33,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 15:34:05] 2026-01-13 14:33:33,046 | INFO     | collected zombie processes
[2026-01-13 15:34:05] 2026-01-13 14:33:33,046 | INFO     | will attempt to kill all subprocesses of pid=27214
[2026-01-13 15:34:05] 2026-01-13 14:33:33,121 | INFO     | process IDs to be killed: [27214] (in reverse order)
[2026-01-13 15:34:05] 2026-01-13 14:33:33,175 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 15:34:05] 2026-01-13 14:33:33,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 15:34:05] 2026-01-13 14:33:33,178 | INFO     | did not find any defunct processes belonging to 27214
[2026-01-13 15:34:05] 2026-01-13 14:33:33,180 | INFO     | did not find any defunct processes belonging to 27214
[2026-01-13 15:34:05] 2026-01-13 14:33:33,180 | INFO     | ready for new job
[2026-01-13 15:34:05] 2026-01-13 14:33:33,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 15:34:05] 2026-01-13 14:33:33,186 | INFO     | ***************************************
[2026-01-13 15:34:05] 2026-01-13 14:33:33,187 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 15:34:05] 2026-01-13 14:33:33,187 | INFO     | ***************************************
[2026-01-13 15:34:05] 2026-01-13 14:33:33,187 | INFO     | 
[2026-01-13 15:34:05] 2026-01-13 14:33:33,188 | INFO     | pilot is running in a VM
[2026-01-13 15:34:05] 2026-01-13 14:33:33,188 | INFO     | architecture information:
[2026-01-13 15:34:05] 2026-01-13 14:33:33,188 | INFO     | executing command: cat /etc/os-release
[2026-01-13 15:34:05] 2026-01-13 14:33:33,205 | INFO     | cat /etc/os-release:
[2026-01-13 15:34:05] NAME="CentOS Linux"
[2026-01-13 15:34:05] VERSION="7 (Core)"
[2026-01-13 15:34:05] ID="centos"
[2026-01-13 15:34:05] ID_LIKE="rhel fedora"
[2026-01-13 15:34:05] VERSION_ID="7"
[2026-01-13 15:34:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 15:34:05] ANSI_COLOR="0;31"
[2026-01-13 15:34:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 15:34:05] HOME_URL="https://www.centos.org/"
[2026-01-13 15:34:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 15:34:05] 
[2026-01-13 15:34:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 15:34:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 15:34:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 15:34:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 15:34:05] 
[2026-01-13 15:34:05] 2026-01-13 14:33:33,205 | INFO     | ***************************************
[2026-01-13 15:34:05] 2026-01-13 14:33:33,708 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-13 15:34:05] 2026-01-13 14:33:33,749 | INFO     | sufficient remaining disk space (496042508288 B)
[2026-01-13 15:34:05] 2026-01-13 14:33:33,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 15:34:05] 2026-01-13 14:33:33,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 15:34:05] 2026-01-13 14:33:33,750 | INFO     | update_server=False
[2026-01-13 15:34:05] 2026-01-13 14:33:33,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 15:34:05] 2026-01-13 14:33:33,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 15:34:05] 2026-01-13 14:33:34,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 15:34:05] 2026-01-13 14:33:34,060 | INFO     | all data control threads have been joined
[2026-01-13 15:34:05] 2026-01-13 14:33:34,375 | INFO     | all job control threads have been joined
[2026-01-13 15:34:05] 2026-01-13 14:33:34,606 | INFO     | all payload control threads have been joined
[2026-01-13 15:34:05] 2026-01-13 14:33:34,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 15:34:05] 2026-01-13 14:33:34,626 | INFO     | aborting loop
[2026-01-13 15:34:05] 2026-01-13 14:33:34,758 | INFO     | [job] queue monitor thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:34,763 | INFO     | [job] retrieve thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,066 | INFO     | [data] control thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,087 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,109 | INFO     | [data] copytool_in thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 15:34:05] 2026-01-13 14:33:35,381 | INFO     | [job] control thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,392 | INFO     | [payload] failed_post thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,587 | INFO     | [payload] validate_post thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,612 | INFO     | [payload] control thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,631 | INFO     | [job] job monitor thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,915 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:35,938 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:36,016 | INFO     | [data] copytool_out thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:36,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:36,124 | INFO     | [job] validate thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:39,116 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 15:34:05] 2026-01-13 14:33:52,953 | INFO     | [monitor] cgroup control has ended
[2026-01-13 15:34:05] 2026-01-13 14:33:54,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020371461952)>', '<ExcThread(monitor, started 140019926808320)>']
[2026-01-13 15:34:05] 2026-01-13 14:33:59,690 | INFO     | all workflow threads have been joined
[2026-01-13 15:34:05] 2026-01-13 14:33:59,691 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 15:34:05] 2026-01-13 14:33:59,691 | INFO     | traces error code: 0
[2026-01-13 15:34:05] 2026-01-13 14:33:59,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 15:34:05] 2026-01-13 14:34:03,726 | INFO     | 103794s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 15:34:05] 2026-01-13 14:34:04,830 | INFO     | PID=20096 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 15:34:05] 2026-01-13 14:34:04,830 | INFO     | .. there are 4 such processes running
[2026-01-13 15:34:05] 2026-01-13 14:34:04,830 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 15:34:05] 2026-01-13 14:34:04,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 15:34:05] 2026-01-13 14:34:04,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 15:34:05] 2026-01-13 14:34:04,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 15:34:05] 2026-01-13 14:34:04,831 | INFO     | [monitor] control thread has ended
[2026-01-13 15:34:05] 2026-01-13 14:34:04,960 [wrapper] ==== pilot stdout END ====
[2026-01-13 15:34:05] 2026-01-13 14:34:04,966 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 15:34:05] 2026-01-13 14:34:04,971 [wrapper] pilotpid: 20096
[2026-01-13 15:34:05] 2026-01-13 14:34:04,975 [wrapper] Pilot exit status: 0
[2026-01-13 15:34:05] 2026-01-13 14:34:04,992 [wrapper] pandaids: 6966868419
[2026-01-13 15:34:05] 2026-01-13 14:34:05,029 [wrapper] cleanup supervisor_pilot 19670 20097
[2026-01-13 15:34:05] 2026-01-13 14:34:05,033 [wrapper] Test setup, not cleaning
[2026-01-13 15:34:05] 2026-01-13 14:34:05,044 [wrapper] apfmon messages muted
[2026-01-13 15:34:05] 2026-01-13 14:34:05,048 [wrapper] ==== wrapper stdout END ====
[2026-01-13 15:34:05] 2026-01-13 14:34:05,055 [wrapper] ==== wrapper stderr END ====
[2026-01-13 15:34:05]  *** Error codes and diagnostics ***
[2026-01-13 15:34:05]     "exeErrorCode": 0,
[2026-01-13 15:34:05]     "exeErrorDiag": "",
[2026-01-13 15:34:05]     "pilotErrorCode": 0,
[2026-01-13 15:34:05]     "pilotErrorDiag": "",
[2026-01-13 15:34:05]  *** Listing of results directory ***
[2026-01-13 15:34:05] total 1492516
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc     579449 Jan 12 10:00 pilot3.tar.gz
[2026-01-13 15:34:05] -rwx------. 1 boinc boinc      36322 Jan 12 10:05 runpilot2-wrapper.sh
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc       5112 Jan 12 10:06 queuedata.json
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc        100 Jan 12 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 15:34:05] -rwxr-xr-x. 1 boinc boinc       7986 Jan 12 10:38 run_atlas
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc        105 Jan 12 10:38 job.xml
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc  319847997 Jan 12 10:39 EVNT.48118027._000394.pool.root.1
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc      15847 Jan 12 10:39 start_atlas.sh
[2026-01-13 15:34:05] drwxrwx--x. 2 boinc boinc         68 Jan 12 10:39 shared
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc     592612 Jan 12 10:39 input.tar.gz
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc       6391 Jan 12 10:39 init_data.xml
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc          0 Jan 12 10:39 boinc_lockfile
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc       2897 Jan 12 10:39 pandaJob.out
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc     987688 Jan 12 10:43 agis_schedconf.cvmfs.json
[2026-01-13 15:34:05] drwx------. 5 boinc boinc       4096 Jan 12 10:43 pilot3
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc        534 Jan 13 15:22 boinc_task_state.xml
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc 1171041094 Jan 13 15:32 HITS.48187943._001919.pool.root.1
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc         95 Jan 13 15:33 pilot_heartbeat.json
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc       1036 Jan 13 15:33 memory_monitor_summary.json
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc    1516246 Jan 13 15:33 agis_ddmendpoints.agis.ALL.json
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc    3023690 Jan 13 15:33 log.48187943._001919.job.log.tgz.1
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc      27869 Jan 13 15:33 heartbeat.json
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc         30 Jan 13 15:34 wrapper_checkpoint.txt
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc       8192 Jan 13 15:34 boinc_mmap_file
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc        937 Jan 13 15:34 pilotlog.txt
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc   13735555 Jan 13 15:34 log.48187943._001919.job.log.1
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc        353 Jan 13 15:34 output.list
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc        620 Jan 13 15:34 runtime_log
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc   16793600 Jan 13 15:34 result.tar.gz
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc       8834 Jan 13 15:34 runtime_log.err
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc        664 Jan 13 15:34 0otNDm42Sz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9TnKDmQ8DtXo.diag
[2026-01-13 15:34:05] -rw-r--r--. 1 boinc boinc      21365 Jan 13 15:34 stderr.txt
[2026-01-13 15:34:05] HITS file was successfully produced:
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc 1171041094 Jan 13 15:32 shared/HITS.pool.root.1
[2026-01-13 15:34:05]  *** Contents of shared directory: ***
[2026-01-13 15:34:05] total 1472944
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc  319847997 Jan 12 10:39 ATLAS.root_0
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc      15847 Jan 12 10:39 start_atlas.sh
[2026-01-13 15:34:05] -rw-r--r--. 2 boinc boinc     592612 Jan 12 10:39 input.tar.gz
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc 1171041094 Jan 13 15:32 HITS.pool.root.1
[2026-01-13 15:34:05] -rw-------. 1 boinc boinc   16793600 Jan 13 15:34 result.tar.gz
15:34:06 (16139): run_atlas exited; CPU time 393182.666961
15:34:06 (16139): called boinc_finish(0)

</stderr_txt>
]]>

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