Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:16:16 (2630036): wrapper (7.7.26015): starting
04:16:16 (2630036): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 04:16:16] Arguments: --nthreads 12
[2026-01-12 04:16:16] Threads: 12
[2026-01-12 04:16:16] Checking for CVMFS
[2026-01-12 04:16:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:16:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:16:18] 2.13.3.0 12130 95841 354968 155046 0 65 25031053 40960001 9850 16776704 0 251951454 99.574 279445573 36837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:16:18] CVMFS is ok
[2026-01-12 04:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:16:18] Further information can be found at the LHC@home message board.
[2026-01-12 04:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:16:18] Checking for apptainer binary...
[2026-01-12 04:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:16:18] Running /usr/bin/apptainer --version
[2026-01-12 04:16:18] apptainer version 1.4.5-2.el9
[2026-01-12 04:16:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:16:18] c6-5-7-4.aglt2.org
[2026-01-12 04:16:18] apptainer works
[2026-01-12 04:16:18] Set ATHENA_PROC_NUMBER=12
[2026-01-12 04:16:18] Set ATHENA_CORE_NUMBER=12
[2026-01-12 04:16:18] Starting ATLAS job with PandaID=6966865258
[2026-01-12 04:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:51:13]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:51:13] 2026-01-12 22:50:22,105 | INFO     | monitor loop #3155: job 0:6966865258 is in state 'finished'
[2026-01-12 17:51:13] 2026-01-12 22:50:22,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,129 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966865258/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,130 | INFO     | extracted standard info from prmon json
[2026-01-12 17:51:13] 2026-01-12 22:50:22,201 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:51:13] 2026-01-12 22:50:22,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:51:13] 2026-01-12 22:50:22,235 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:51:13] 2026-01-12 22:50:22,236 | INFO     | sum of square deviations: 158103895760.16495
[2026-01-12 17:51:13] 2026-01-12 22:50:22,247 | INFO     | sum of deviations: 1521073395639.004
[2026-01-12 17:51:13] 2026-01-12 22:50:22,248 | INFO     | mean x: 1768233799.172716
[2026-01-12 17:51:13] 2026-01-12 22:50:22,248 | INFO     | mean y: 4188481.5506883604
[2026-01-12 17:51:13] 2026-01-12 22:50:22,248 | INFO     | intersect: -17007494730.046434
[2026-01-12 17:51:13] 2026-01-12 22:50:22,249 | INFO     | chi2: 11.18458801616843
[2026-01-12 17:51:13] 2026-01-12 22:50:22,250 | INFO     | sum of square deviations: 155155556161.98605
[2026-01-12 17:51:13] 2026-01-12 22:50:22,260 | INFO     | sum of deviations: 1938541767053.0996
[2026-01-12 17:51:13] 2026-01-12 22:50:22,261 | INFO     | mean x: 1768233646.7367759
[2026-01-12 17:51:13] 2026-01-12 22:50:22,261 | INFO     | mean y: 4210061.890428212
[2026-01-12 17:51:13] 2026-01-12 22:50:22,261 | INFO     | intersect: -22088423053.543465
[2026-01-12 17:51:13] 2026-01-12 22:50:22,262 | INFO     | chi2: 7.495893014794449
[2026-01-12 17:51:13] 2026-01-12 22:50:22,262 | INFO     | current chi2=7.495893014794449 (change=32.98015980599023 %)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,263 | INFO     | sum of square deviations: 152244147482.20813
[2026-01-12 17:51:13] 2026-01-12 22:50:22,273 | INFO     | sum of deviations: 2381668274631.2764
[2026-01-12 17:51:13] 2026-01-12 22:50:22,273 | INFO     | mean x: 1768233494.3016477
[2026-01-12 17:51:13] 2026-01-12 22:50:22,274 | INFO     | mean y: 4233266.557667934
[2026-01-12 17:51:13] 2026-01-12 22:50:22,274 | INFO     | intersect: -27657556596.404343
[2026-01-12 17:51:13] 2026-01-12 22:50:22,274 | INFO     | chi2: 3.5354371463181433
[2026-01-12 17:51:13] 2026-01-12 22:50:22,275 | INFO     | current chi2=3.5354371463181433 (change=52.83501059393 %)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,275 | INFO     | sum of square deviations: 149369006192.71198
[2026-01-12 17:51:13] 2026-01-12 22:50:22,286 | INFO     | sum of deviations: 2515038453716.0757
[2026-01-12 17:51:13] 2026-01-12 22:50:22,286 | INFO     | mean x: 1768233341.8558674
[2026-01-12 17:51:13] 2026-01-12 22:50:22,286 | INFO     | mean y: 4240323.221938776
[2026-01-12 17:51:13] 2026-01-12 22:50:22,286 | INFO     | intersect: -29768836188.8676
[2026-01-12 17:51:13] 2026-01-12 22:50:22,287 | INFO     | chi2: 2.9070842081270993
[2026-01-12 17:51:13] 2026-01-12 22:50:22,287 | INFO     | current chi2=2.9070842081270993 (change=17.77299134975204 %)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,287 | INFO     | right removable region: 783
[2026-01-12 17:51:13] 2026-01-12 22:50:22,288 | INFO     | sum of square deviations: 155150598081.9862
[2026-01-12 17:51:13] 2026-01-12 22:50:22,357 | INFO     | sum of deviations: 1143340721555.714
[2026-01-12 17:51:13] 2026-01-12 22:50:22,358 | INFO     | mean x: 1768233951.7367759
[2026-01-12 17:51:13] 2026-01-12 22:50:22,358 | INFO     | mean y: 4207979.568010076
[2026-01-12 17:51:13] 2026-01-12 22:50:22,358 | INFO     | intersect: -13026317891.751633
[2026-01-12 17:51:13] 2026-01-12 22:50:22,359 | INFO     | chi2: 8.486641167078194
[2026-01-12 17:51:13] 2026-01-12 22:50:22,359 | INFO     | current chi2=8.486641167078194 (change=24.122004719262673 %)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,359 | INFO     | left removable region: 10
[2026-01-12 17:51:13] 2026-01-12 22:50:22,360 | INFO     | sum of square deviations: 143163097275.19528
[2026-01-12 17:51:13] 2026-01-12 22:50:22,370 | INFO     | sum of deviations: 2042149371879.088
[2026-01-12 17:51:13] 2026-01-12 22:50:22,370 | INFO     | mean x: 1768233616.4915912
[2026-01-12 17:51:13] 2026-01-12 22:50:22,370 | INFO     | mean y: 4264868.705045278
[2026-01-12 17:51:13] 2026-01-12 22:50:22,371 | INFO     | intersect: -25218695782.33865
[2026-01-12 17:51:13] 2026-01-12 22:50:22,371 | INFO     | chi2: 0.06657487618852577
[2026-01-12 17:51:13] 2026-01-12 22:50:22,372 | INFO     | current memory leak: 14.26 B/s (using 773 data points, chi2=0.07)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | could have reported an average CPU frequency of 3043 MHz (30 samples)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | ..............................
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . Timing measurements:
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . get job = 0 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . initial setup = 2 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . payload setup = 23 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . stage-in = 0 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . payload execution = 48730 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,373 | INFO     | . stage-out = 19 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,374 | INFO     | . log creation = 7 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,374 | INFO     | ..............................
[2026-01-12 17:51:13] 2026-01-12 22:50:22,907 | INFO     | 
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | job summary report
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | --------------------------------------------------
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | PanDA job id: 6966865258
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | task id: 48187943
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | errors: (none)
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | pilot state: finished 
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | transexitcode: 0
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | exeerrorcode: 0
[2026-01-12 17:51:13] 2026-01-12 22:50:22,908 | INFO     | exeerrordiag: 
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | exitcode: 0
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | exitmsg: OK
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | cpuconsumptiontime: 277990 s
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | nevents: 2050
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | neventsw: 0
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | pid: 2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | pgrp: 2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | corecount: 12
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | event service: False
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | sizes: {0: 2284623, 1: 2284623, 7: 2284913, 11: 2284941, 48758: 2353495, 48778: 2362493, 48779: 2362677, 48807: 2362923}
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | --------------------------------------------------
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | 
[2026-01-12 17:51:13] 2026-01-12 22:50:22,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 17:51:13] 2026-01-12 22:50:23,080 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:51:13] 2026-01-12 22:50:23,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:51:13] 2026-01-12 22:50:23,083 | INFO     | job 6966865258 has completed (purged errors)
[2026-01-12 17:51:13] 2026-01-12 22:50:23,083 | INFO     | overall cleanup function is called
[2026-01-12 17:51:13] 2026-01-12 22:50:23,188 | INFO     | PID=2633921 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 17:51:13] 2026-01-12 22:50:23,189 | INFO     | .. there are 10 such processes running
[2026-01-12 17:51:13] 2026-01-12 22:50:24,134 | INFO     | --- collectZombieJob: --- 10, [2641672]
[2026-01-12 17:51:13] 2026-01-12 22:50:24,134 | INFO     | zombie collector waiting for pid 2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:24,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:51:13] 2026-01-12 22:50:24,134 | INFO     | collected zombie processes
[2026-01-12 17:51:13] 2026-01-12 22:50:24,134 | INFO     | will attempt to kill all subprocesses of pid=2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:24,865 | INFO     | process IDs to be killed: [2641672] (in reverse order)
[2026-01-12 17:51:13] 2026-01-12 22:50:25,928 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:51:13] 2026-01-12 22:50:25,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:51:13] 2026-01-12 22:50:25,955 | INFO     | did not find any defunct processes belonging to 2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:25,980 | INFO     | did not find any defunct processes belonging to 2641672
[2026-01-12 17:51:13] 2026-01-12 22:50:25,980 | INFO     | ready for new job
[2026-01-12 17:51:13] 2026-01-12 22:50:25,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:51:13] 2026-01-12 22:50:26,013 | INFO     | ***************************************
[2026-01-12 17:51:13] 2026-01-12 22:50:26,013 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:51:13] 2026-01-12 22:50:26,013 | INFO     | ***************************************
[2026-01-12 17:51:13] 2026-01-12 22:50:26,013 | INFO     | 
[2026-01-12 17:51:13] 2026-01-12 22:50:26,016 | INFO     | architecture information:
[2026-01-12 17:51:13] 2026-01-12 22:50:26,050 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:51:13] 2026-01-12 22:50:26,175 | INFO     | cat /etc/os-release:
[2026-01-12 17:51:13] NAME="CentOS Linux"
[2026-01-12 17:51:13] VERSION="7 (Core)"
[2026-01-12 17:51:13] ID="centos"
[2026-01-12 17:51:13] ID_LIKE="rhel fedora"
[2026-01-12 17:51:13] VERSION_ID="7"
[2026-01-12 17:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:51:13] ANSI_COLOR="0;31"
[2026-01-12 17:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:51:13] HOME_URL="https://www.centos.org/"
[2026-01-12 17:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:51:13] 
[2026-01-12 17:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:51:13] 
[2026-01-12 17:51:13] 2026-01-12 22:50:26,176 | INFO     | ***************************************
[2026-01-12 17:51:13] 2026-01-12 22:50:26,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 17:51:13] 2026-01-12 22:50:26,788 | INFO     | sufficient remaining disk space (72236400640 B)
[2026-01-12 17:51:13] 2026-01-12 22:50:26,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:51:13] 2026-01-12 22:50:26,789 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:51:13] 2026-01-12 22:50:26,789 | INFO     | update_server=False
[2026-01-12 17:51:13] 2026-01-12 22:50:26,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:51:13] 2026-01-12 22:50:27,145 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 17:51:13] 2026-01-12 22:50:27,146 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 17:51:13] 2026-01-12 22:50:27,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:51:13] 2026-01-12 22:50:27,146 | INFO     | will abort loop
[2026-01-12 17:51:13] 2026-01-12 22:50:27,638 | INFO     | all job control threads have been joined
[2026-01-12 17:51:13] 2026-01-12 22:50:27,795 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:27,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:51:13] 2026-01-12 22:50:27,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:51:13] 2026-01-12 22:50:27,831 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:27,840 | INFO     | all data control threads have been joined
[2026-01-12 17:51:13] 2026-01-12 22:50:27,843 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:27,860 | INFO     | all payload control threads have been joined
[2026-01-12 17:51:13] 2026-01-12 22:50:28,102 | INFO     | [job] validate thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,133 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,135 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,135 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,154 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,239 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:51:13] 2026-01-12 22:50:28,604 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,644 | INFO     | [job] control thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,826 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,846 | INFO     | [data] control thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:28,866 | INFO     | [payload] control thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:29,832 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:32,652 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:51:13] 2026-01-12 22:50:56,257 | INFO     | PID=2633921 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 17:51:13] 2026-01-12 22:50:56,257 | INFO     | .. there are 10 such processes running
[2026-01-12 17:51:13] 2026-01-12 22:50:56,257 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:51:13] 2026-01-12 22:50:56,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:51:13] 2026-01-12 22:50:56,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:51:13] 2026-01-12 22:51:04,570 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:51:13] 2026-01-12 22:51:05,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344818935616)>', '<ExcThread(monitor, started 140344448489216)>']
[2026-01-12 17:51:13] 2026-01-12 22:51:06,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:51:13] 2026-01-12 22:51:06,318 | INFO     | [monitor] control thread has ended
[2026-01-12 17:51:13] 2026-01-12 22:51:10,626 | INFO     | all workflow threads have been joined
[2026-01-12 17:51:13] 2026-01-12 22:51:10,626 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:51:13] 2026-01-12 22:51:10,626 | INFO     | traces error code: 0
[2026-01-12 17:51:13] 2026-01-12 22:51:10,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:51:13] 2026-01-12 22:51:11,318 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:51:13] 2026-01-12 22:51:11,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:51:13] 2026-01-12 22:51:11,351 [wrapper] pilotpid: 2633921
[2026-01-12 17:51:13] 2026-01-12 22:51:11,369 [wrapper] Pilot exit status: 0
[2026-01-12 17:51:13] 2026-01-12 22:51:11,515 [wrapper] pandaids: 6966865258
[2026-01-12 17:51:13] 2026-01-12 22:51:12,343 [wrapper] cleanup supervisor_pilot  201963 2633922
[2026-01-12 17:51:13] 2026-01-12 22:51:12,389 [wrapper] Test setup, not cleaning
[2026-01-12 17:51:13] 2026-01-12 22:51:12,448 [wrapper] apfmon messages muted
[2026-01-12 17:51:13] 2026-01-12 22:51:12,502 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:51:13] 2026-01-12 22:51:12,548 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:51:13]  *** Error codes and diagnostics ***
[2026-01-12 17:51:13]     "exeErrorCode": 0,
[2026-01-12 17:51:13]     "exeErrorDiag": "",
[2026-01-12 17:51:13]     "pilotErrorCode": 0,
[2026-01-12 17:51:13]     "pilotErrorDiag": "",
[2026-01-12 17:51:13]  *** Listing of results directory ***
[2026-01-12 17:51:13] total 1480676
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-12 17:51:13] -rwx------. 1 boincer umatlas      36322 Jan 12 04:02 runpilot2-wrapper.sh
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:03 queuedata.json
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:51:13] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:16 run_atlas
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:16 job.xml
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas  322437790 Jan 12 04:16 EVNT.48118027._000343.pool.root.1
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:16 start_atlas.sh
[2026-01-12 17:51:13] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:16 shared
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas     592614 Jan 12 04:16 input.tar.gz
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:16 boinc_lockfile
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 04:16 pandaJob.out
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas         57 Jan 12 04:16 setup.sh.local
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas     987688 Jan 12 04:16 agis_schedconf.cvmfs.json
[2026-01-12 17:51:13] drwx------. 5 boincer umatlas       4096 Jan 12 04:16 pilot3
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas        533 Jan 12 17:34 boinc_task_state.xml
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas 1171273409 Jan 12 17:48 HITS.48187943._001672.pool.root.1
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas       6844 Jan 12 17:48 init_data.xml
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas       1051 Jan 12 17:49 memory_monitor_summary.json
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas    1516240 Jan 12 17:49 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas    2825707 Jan 12 17:49 log.48187943._001672.job.log.tgz.1
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas      28420 Jan 12 17:50 heartbeat.json
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas         95 Jan 12 17:50 pilot_heartbeat.json
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas       5010 Jan 12 17:51 pilotlog.txt
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas    6446508 Jan 12 17:51 log.48187943._001672.job.log.1
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 17:51 boinc_mmap_file
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas        353 Jan 12 17:51 output.list
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas         29 Jan 12 17:51 wrapper_checkpoint.txt
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas        620 Jan 12 17:51 runtime_log
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas    9308160 Jan 12 17:51 result.tar.gz
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas       9345 Jan 12 17:51 runtime_log.err
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas        660 Jan 12 17:51 IwpLDmzzSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXQnKDmwiBnsn.diag
[2026-01-12 17:51:13] -rw-r--r--. 1 boincer umatlas      21322 Jan 12 17:51 stderr.txt
[2026-01-12 17:51:13] HITS file was successfully produced:
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas 1171273409 Jan 12 17:48 shared/HITS.pool.root.1
[2026-01-12 17:51:13]  *** Contents of shared directory: ***
[2026-01-12 17:51:13] total 1468404
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas  322437790 Jan 12 04:16 ATLAS.root_0
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:16 start_atlas.sh
[2026-01-12 17:51:13] -rw-r--r--. 2 boincer umatlas     592614 Jan 12 04:16 input.tar.gz
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas 1171273409 Jan 12 17:48 HITS.pool.root.1
[2026-01-12 17:51:13] -rw-------. 1 boincer umatlas    9308160 Jan 12 17:51 result.tar.gz
17:51:15 (2630036): run_atlas exited; CPU time 278271.670419
17:51:15 (2630036): called boinc_finish(0)

</stderr_txt>
]]>

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