Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:23:17 (1340199): wrapper (7.7.26015): starting
18:23:17 (1340199): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 18:23:17] Arguments: --nthreads 4
[2026-01-12 18:23:17] Threads: 4
[2026-01-12 18:23:17] Checking for CVMFS
[2026-01-12 18:23:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 18:23:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 18:23:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 18:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 18:23:17] 2.9.2.0 1272165 488 56036 155061 0 68 36790325 36864000 0 130560 0 183871 99.984 17730 8118 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 18:23:17] CVMFS is ok
[2026-01-12 18:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:23:17] Further information can be found at the LHC@home message board.
[2026-01-12 18:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:23:17] Checking for apptainer binary...
[2026-01-12 18:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 18:23:17] Running /usr/bin/apptainer --version
[2026-01-12 18:23:17] apptainer version 1.4.1-1.1
[2026-01-12 18:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:23:17] thA315a
[2026-01-12 18:23:17] apptainer works
[2026-01-12 18:23:20] Set ATHENA_PROC_NUMBER=4
[2026-01-12 18:23:20] Set ATHENA_CORE_NUMBER=4
[2026-01-12 18:23:20] Starting ATLAS job with PandaID=6966864219
[2026-01-12 18:23:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:32:28]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:32:28] 2026-01-13 01:31:57,888 | INFO     | cat /etc/os-release:
[2026-01-13 02:32:28] NAME="CentOS Linux"
[2026-01-13 02:32:28] VERSION="7 (Core)"
[2026-01-13 02:32:28] ID="centos"
[2026-01-13 02:32:28] ID_LIKE="rhel fedora"
[2026-01-13 02:32:28] VERSION_ID="7"
[2026-01-13 02:32:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:32:28] ANSI_COLOR="0;31"
[2026-01-13 02:32:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:32:28] HOME_URL="https://www.centos.org/"
[2026-01-13 02:32:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:32:28] 
[2026-01-13 02:32:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:32:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:32:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:32:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:32:28] 
[2026-01-13 02:32:28] 2026-01-13 01:31:57,889 | INFO     | ***************************************
[2026-01-13 02:32:28] 2026-01-13 01:31:58,391 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | INFO     | sufficient remaining disk space (222253023232 B)
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | INFO     | update_server=False
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:32:28] 2026-01-13 01:31:58,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:32:28] 2026-01-13 01:31:58,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:32:28] 2026-01-13 01:31:58,639 | INFO     | all job control threads have been joined
[2026-01-13 02:32:28] 2026-01-13 01:31:59,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:32:28] 2026-01-13 01:31:59,121 | INFO     | aborting loop
[2026-01-13 02:32:28] 2026-01-13 01:31:59,409 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:31:59,413 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:31:59,470 | INFO     | all data control threads have been joined
[2026-01-13 02:32:28] 2026-01-13 01:31:59,477 | INFO     | all payload control threads have been joined
[2026-01-13 02:32:28] 2026-01-13 01:31:59,645 | INFO     | [job] control thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:31:59,697 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:31:59,974 | INFO     | [job] validate thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,018 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,055 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,127 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,414 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,431 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,476 | INFO     | [data] control thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,482 | INFO     | [payload] control thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,519 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:00,817 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:01,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:32:28] 2026-01-13 01:32:03,411 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:32:28] 2026-01-13 01:32:05,842 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:32:28] 2026-01-13 01:32:07,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653565019968)>', '<ExcThread(monitor, started 139652765820672)>']
[2026-01-13 02:32:28] 2026-01-13 01:32:12,865 | INFO     | all workflow threads have been joined
[2026-01-13 02:32:28] 2026-01-13 01:32:12,865 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:32:28] 2026-01-13 01:32:12,866 | INFO     | traces error code: 0
[2026-01-13 02:32:28] 2026-01-13 01:32:12,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:32:28] 2026-01-13 01:32:28,082 | INFO     | PID=1343992 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | CRITICAL | thread 'MainThread' is not alive
[2026-01-13 02:32:28] 2026-01-13 01:32:28,083 | INFO     | [monitor] control thread has ended
[2026-01-13 02:32:28] 2026-01-13 01:32:28,147 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:32:28] 2026-01-13 01:32:28,151 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:32:28] 2026-01-13 01:32:28,155 [wrapper] pilotpid: 1343992
[2026-01-13 02:32:28] 2026-01-13 01:32:28,158 [wrapper] Pilot exit status: 0
[2026-01-13 02:32:28] 2026-01-13 01:32:28,170 [wrapper] pandaids: 6966864219
[2026-01-13 02:32:28] 2026-01-13 01:32:28,191 [wrapper] cleanup supervisor_pilot 1403117 1343993
[2026-01-13 02:32:28] 2026-01-13 01:32:28,195 [wrapper] Test setup, not cleaning
[2026-01-13 02:32:28] 2026-01-13 01:32:28,199 [wrapper] apfmon messages muted
[2026-01-13 02:32:28] 2026-01-13 01:32:28,202 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:32:28] 2026-01-13 01:32:28,206 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:32:28]  *** Error codes and diagnostics ***
[2026-01-13 02:32:28]     "exeErrorCode": 0,
[2026-01-13 02:32:28]     "exeErrorDiag": "",
[2026-01-13 02:32:28]     "pilotErrorCode": 0,
[2026-01-13 02:32:28]     "pilotErrorDiag": "",
[2026-01-13 02:32:28]  *** Listing of results directory ***
[2026-01-13 02:32:28] total 1480952
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc     579449 Jan 12 10:00 pilot3.tar.gz
[2026-01-13 02:32:28] -rwx------ 1 boinc boinc      36322 Jan 12 10:02 runpilot2-wrapper.sh
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       5112 Jan 12 10:03 queuedata.json
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc        100 Jan 12 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:32:28] -rwxr-xr-x 1 boinc boinc       7986 Jan 12 18:23 run_atlas
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc        105 Jan 12 18:23 job.xml
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc  321217453 Jan 12 18:23 EVNT.48118027._000316.pool.root.1
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc     592610 Jan 12 18:23 input.tar.gz
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc      15847 Jan 12 18:23 start_atlas.sh
[2026-01-13 02:32:28] drwxrwx--x 2 boinc boinc       4096 Jan 12 18:23 shared
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc          0 Jan 12 18:23 boinc_setup_complete
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       6371 Jan 12 18:23 init_data.xml
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc          0 Jan 12 18:23 boinc_lockfile
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       2897 Jan 12 18:23 pandaJob.out
[2026-01-13 02:32:28] -rw------- 1 boinc boinc     988539 Jan 12 18:23 agis_schedconf.cvmfs.json
[2026-01-13 02:32:28] drwx------ 5 boinc boinc       4096 Jan 12 18:23 pilot3
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc        532 Jan 13 02:27 boinc_task_state.xml
[2026-01-13 02:32:28] -rw------- 1 boinc boinc 1179944054 Jan 13 02:31 HITS.48187943._001539.pool.root.1
[2026-01-13 02:32:28] -rw------- 1 boinc boinc       1044 Jan 13 02:31 memory_monitor_summary.json
[2026-01-13 02:32:28] -rw------- 1 boinc boinc    1516240 Jan 13 02:31 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:32:28] -rw------- 1 boinc boinc    1565868 Jan 13 02:31 log.48187943._001539.job.log.tgz.1
[2026-01-13 02:32:28] -rw------- 1 boinc boinc      27728 Jan 13 02:31 heartbeat.json
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc         29 Jan 13 02:32 wrapper_checkpoint.txt
[2026-01-13 02:32:28] -rw------- 1 boinc boinc        817 Jan 13 02:32 pilotlog.txt
[2026-01-13 02:32:28] -rw------- 1 boinc boinc         95 Jan 13 02:32 pilot_heartbeat.json
[2026-01-13 02:32:28] -rw------- 1 boinc boinc    4129883 Jan 13 02:32 log.48187943._001539.job.log.1
[2026-01-13 02:32:28] -rw------- 1 boinc boinc        353 Jan 13 02:32 output.list
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc        620 Jan 13 02:32 runtime_log
[2026-01-13 02:32:28] -rw------- 1 boinc boinc    5734400 Jan 13 02:32 result.tar.gz
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       8903 Jan 13 02:32 runtime_log.err
[2026-01-13 02:32:28] -rw------- 1 boinc boinc        668 Jan 13 02:32 5tHODmyzSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJPnKDmrOOCsm.diag
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       8192 Jan 13 02:32 boinc_mmap_file
[2026-01-13 02:32:28] -rw-r--r-- 1 boinc boinc       8877 Jan 13 02:32 stderr.txt
[2026-01-13 02:32:28] HITS file was successfully produced:
[2026-01-13 02:32:28] -rw------- 1 boinc boinc 1179944054 Jan 13 02:31 shared/HITS.pool.root.1
[2026-01-13 02:32:28]  *** Contents of shared directory: ***
[2026-01-13 02:32:28] total 1472188
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc  321217453 Jan 12 18:23 ATLAS.root_0
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc     592610 Jan 12 18:23 input.tar.gz
[2026-01-13 02:32:28] -rw-r--r-- 2 boinc boinc      15847 Jan 12 18:23 start_atlas.sh
[2026-01-13 02:32:28] -rw------- 1 boinc boinc 1179944054 Jan 13 02:31 HITS.pool.root.1
[2026-01-13 02:32:28] -rw------- 1 boinc boinc    5734400 Jan 13 02:32 result.tar.gz
02:32:49 (1340199): run_atlas exited; CPU time 115051.686419
02:32:49 (1340199): called boinc_finish(0)

</stderr_txt>
]]>

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