Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:20 (2031342): wrapper (7.7.26015): starting
04:09:20 (2031342): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 04:09:20] Arguments: --nthreads 9
[2026-01-12 04:09:20] Threads: 9
[2026-01-12 04:09:20] Checking for CVMFS
[2026-01-12 04:09:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:09:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:09:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:09:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:09:24] 2.13.3.0 13009 34198 241824 155045 3 54 31109325 32935936 18170 16776704 0 29630068 99.656 27464796 14222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:09:24] CVMFS is ok
[2026-01-12 04:09:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:09:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:09:24] Further information can be found at the LHC@home message board.
[2026-01-12 04:09:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:09:24] Checking for apptainer binary...
[2026-01-12 04:09:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:09:24] Running /usr/bin/apptainer --version
[2026-01-12 04:09:25] apptainer version 1.4.5-2.el9
[2026-01-12 04:09:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:09:26] c6-12-25-2.aglt2.org
[2026-01-12 04:09:26] apptainer works
[2026-01-12 04:09:27] Set ATHENA_PROC_NUMBER=9
[2026-01-12 04:09:27] Set ATHENA_CORE_NUMBER=9
[2026-01-12 04:09:27] Starting ATLAS job with PandaID=6966866872
[2026-01-12 04:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:40:05 (2031342): BOINC client no longer exists - exiting
01:40:05 (2031342): timer handler: client dead, exiting
01:48:57 (1058836): wrapper (7.7.26015): starting
01:48:57 (1058836): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 01:48:57] Arguments: --nthreads 8
[2026-01-13 01:48:57] Threads: 8
[2026-01-13 01:48:57] This job has been restarted, cleaning up previous attempt
[2026-01-13 01:48:57] Checking for CVMFS
[2026-01-13 01:48:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 01:49:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 01:49:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 01:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 01:49:02] 2.13.3.0 13009 35498 249332 155079 3 78 22150472 32935936 18195 16776704 0 31919805 99.660 28904526 14147 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 01:49:02] CVMFS is ok
[2026-01-13 01:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 01:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 01:49:02] Further information can be found at the LHC@home message board.
[2026-01-13 01:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 01:49:02] Checking for apptainer binary...
[2026-01-13 01:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 01:49:02] Running /usr/bin/apptainer --version
[2026-01-13 01:49:02] apptainer version 1.4.5-2.el9
[2026-01-13 01:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 01:49:03] c6-12-25-2.aglt2.org
[2026-01-13 01:49:03] apptainer works
[2026-01-13 01:49:03] Set ATHENA_PROC_NUMBER=8
[2026-01-13 01:49:03] Set ATHENA_CORE_NUMBER=8
[2026-01-13 01:49:04] Starting ATLAS job with PandaID=6966866872
[2026-01-13 01:49:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:11 (1058836): BOINC client no longer exists - exiting
05:20:11 (1058836): timer handler: client dead, exiting
05:38:20 (2025348): wrapper (7.7.26015): starting
05:38:20 (2025348): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 05:38:20] Arguments: --nthreads 8
[2026-01-15 05:38:20] Threads: 8
[2026-01-15 05:38:20] This job has been restarted, cleaning up previous attempt
[2026-01-15 05:38:20] Checking for CVMFS
[2026-01-15 05:38:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 05:38:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 05:38:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 05:38:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 05:38:21] 2.13.3.0 13009 38607 252384 155165 3 138 17467400 32935936 26034 16776704 0 40695455 99.658 42968794 15212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 05:38:21] CVMFS is ok
[2026-01-15 05:38:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 05:38:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 05:38:21] Further information can be found at the LHC@home message board.
[2026-01-15 05:38:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 05:38:21] Checking for apptainer binary...
[2026-01-15 05:38:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 05:38:21] Running /usr/bin/apptainer --version
[2026-01-15 05:38:21] apptainer version 1.4.5-2.el9
[2026-01-15 05:38:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 05:38:22] c6-12-25-2.aglt2.org
[2026-01-15 05:38:22] apptainer works
[2026-01-15 05:38:22] Set ATHENA_PROC_NUMBER=8
[2026-01-15 05:38:22] Set ATHENA_CORE_NUMBER=8
[2026-01-15 05:38:22] Starting ATLAS job with PandaID=6966866872
[2026-01-15 05:38:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-18 18:53:57]  *** The last 200 lines of the pilot log: ***
[2026-01-18 18:53:58] 2026-01-18 23:52:17,833 | INFO     | sum of deviations: 41751249080957.664
[2026-01-18 18:53:58] 2026-01-18 23:52:17,834 | INFO     | mean x: 1768626892.4385197
[2026-01-18 18:53:58] 2026-01-18 23:52:17,835 | INFO     | mean y: 3484837.3662952646
[2026-01-18 18:53:58] 2026-01-18 23:52:17,835 | INFO     | intersect: -1872225109.0924025
[2026-01-18 18:53:58] 2026-01-18 23:52:17,888 | INFO     | chi2: 56.5768014445401
[2026-01-18 18:53:58] 2026-01-18 23:52:17,944 | INFO     | sum of square deviations: 39250331344147.13
[2026-01-18 18:53:58] 2026-01-18 23:52:18,179 | INFO     | monitor loop #9592: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:18,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:18,656 | INFO     | time since job start (306806s) is within the limit (349056.0s)
[2026-01-18 18:53:58] 2026-01-18 23:52:20,687 | INFO     | time since job start (306808s) is within the limit (349056.0s)
[2026-01-18 18:53:58] 2026-01-18 23:52:20,738 | INFO     | monitor loop #9593: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:20,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:22,377 | INFO     | sum of deviations: 44188921429608.13
[2026-01-18 18:53:58] 2026-01-18 23:52:22,377 | INFO     | mean x: 1768626739.945429
[2026-01-18 18:53:58] 2026-01-18 23:52:22,378 | INFO     | mean y: 3488004.537343159
[2026-01-18 18:53:58] 2026-01-18 23:52:22,378 | INFO     | intersect: -1987672461.4597557
[2026-01-18 18:53:58] 2026-01-18 23:52:22,411 | INFO     | chi2: 52.02917167121956
[2026-01-18 18:53:58] 2026-01-18 23:52:22,412 | INFO     | current chi2=52.02917167121956 (change=8.037976091275498 %)
[2026-01-18 18:53:58] 2026-01-18 23:52:22,412 | INFO     | right removable region: 5020
[2026-01-18 18:53:58] 2026-01-18 23:52:22,453 | INFO     | sum of square deviations: 39250310071617.03
[2026-01-18 18:53:58] 2026-01-18 23:52:22,717 | INFO     | time since job start (306810s) is within the limit (349056.0s)
[2026-01-18 18:53:58] 2026-01-18 23:52:23,271 | INFO     | monitor loop #9594: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:23,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:25,857 | INFO     | monitor loop #9595: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:25,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:28,505 | INFO     | monitor loop #9596: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:28,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:28,587 | INFO     | sum of deviations: 39327574532398.36
[2026-01-18 18:53:58] 2026-01-18 23:52:28,587 | INFO     | mean x: 1768627044.945429
[2026-01-18 18:53:58] 2026-01-18 23:52:28,588 | INFO     | mean y: 3487986.051185023
[2026-01-18 18:53:58] 2026-01-18 23:52:28,609 | INFO     | intersect: -1768620611.3890305
[2026-01-18 18:53:58] 2026-01-18 23:52:28,649 | INFO     | chi2: 52.61036483212924
[2026-01-18 18:53:58] 2026-01-18 23:52:28,650 | INFO     | current chi2=52.61036483212924 (change=7.010712007639727 %)
[2026-01-18 18:53:58] 2026-01-18 23:52:28,651 | INFO     | left removable region: 10
[2026-01-18 18:53:58] 2026-01-18 23:52:28,667 | INFO     | sum of square deviations: 38992904202582.48
[2026-01-18 18:53:58] 2026-01-18 23:52:31,149 | INFO     | monitor loop #9597: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:31,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:33,749 | INFO     | monitor loop #9598: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:33,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:36,338 | INFO     | monitor loop #9599: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:36,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:38,619 | INFO     | PID=2047875 has CPU usage=20.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-18 18:53:58] 2026-01-18 23:52:38,640 | INFO     | .. there are 23 such processes running
[2026-01-18 18:53:58] 2026-01-18 23:52:38,867 | INFO     | monitor loop #9600: job 0:6966866872 is in state 'finished'
[2026-01-18 18:53:58] 2026-01-18 23:52:38,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-18 18:53:58] 2026-01-18 23:52:39,652 | INFO     | time since job start (306827s) is within the limit (349056.0s)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,216 | INFO     | sum of deviations: 40580622834291.13
[2026-01-18 18:53:58] 2026-01-18 23:52:40,217 | INFO     | mean x: 1768627014.4602795
[2026-01-18 18:53:58] 2026-01-18 23:52:40,217 | INFO     | mean y: 3493817.666467066
[2026-01-18 18:53:58] 2026-01-18 23:52:40,217 | INFO     | intersect: -1837148403.6840925
[2026-01-18 18:53:58] 2026-01-18 23:52:40,232 | INFO     | chi2: 45.68552115552126
[2026-01-18 18:53:58] 2026-01-18 23:52:40,233 | INFO     | current memory leak: 1.04 B/s (using 5010 data points, chi2=45.69)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,240 | INFO     | could have reported an average CPU frequency of 999 MHz (166 samples)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,241 | INFO     | ..............................
[2026-01-18 18:53:58] 2026-01-18 23:52:40,241 | INFO     | . Timing measurements:
[2026-01-18 18:53:58] 2026-01-18 23:52:40,241 | INFO     | . get job = 0 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,242 | INFO     | . initial setup = 3 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,242 | INFO     | . payload setup = 33 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,242 | INFO     | . stage-in = 0 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,242 | INFO     | . payload execution = 306598 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,242 | INFO     | . stage-out = 62 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,243 | INFO     | . log creation = 32 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,243 | INFO     | ..............................
[2026-01-18 18:53:58] 2026-01-18 23:52:40,737 | INFO     | 
[2026-01-18 18:53:58] 2026-01-18 23:52:40,738 | INFO     | job summary report
[2026-01-18 18:53:58] 2026-01-18 23:52:40,738 | INFO     | --------------------------------------------------
[2026-01-18 18:53:58] 2026-01-18 23:52:40,738 | INFO     | PanDA job id: 6966866872
[2026-01-18 18:53:58] 2026-01-18 23:52:40,738 | INFO     | task id: 48187943
[2026-01-18 18:53:58] 2026-01-18 23:52:40,739 | INFO     | errors: (none)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,739 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-18 18:53:58] 2026-01-18 23:52:40,739 | INFO     | pilot state: finished 
[2026-01-18 18:53:58] 2026-01-18 23:52:40,739 | INFO     | transexitcode: 0
[2026-01-18 18:53:58] 2026-01-18 23:52:40,739 | INFO     | exeerrorcode: 0
[2026-01-18 18:53:58] 2026-01-18 23:52:40,740 | INFO     | exeerrordiag: 
[2026-01-18 18:53:58] 2026-01-18 23:52:40,740 | INFO     | exitcode: 0
[2026-01-18 18:53:58] 2026-01-18 23:52:40,740 | INFO     | exitmsg: OK
[2026-01-18 18:53:58] 2026-01-18 23:52:40,740 | INFO     | cpuconsumptiontime: 812138 s
[2026-01-18 18:53:58] 2026-01-18 23:52:40,740 | INFO     | nevents: 2050
[2026-01-18 18:53:58] 2026-01-18 23:52:40,741 | INFO     | neventsw: 0
[2026-01-18 18:53:58] 2026-01-18 23:52:40,741 | INFO     | pid: 2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:40,741 | INFO     | pgrp: 2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:40,747 | INFO     | corecount: 8
[2026-01-18 18:53:58] 2026-01-18 23:52:40,748 | INFO     | event service: False
[2026-01-18 18:53:58] 2026-01-18 23:52:40,748 | INFO     | sizes: {0: 2286814, 1: 2286842, 2: 2287041, 13: 2287041, 14: 2287391, 24: 2287419, 306637: 2449319, 306638: 2449318, 306703: 2457260, 306705: 2457316, 306792: 2457
[2026-01-18 18:53:58] 2026-01-18 23:52:40,748 | INFO     | --------------------------------------------------
[2026-01-18 18:53:58] 2026-01-18 23:52:40,748 | INFO     | 
[2026-01-18 18:53:58] 2026-01-18 23:52:40,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-18 18:53:58] 2026-01-18 23:52:40,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,852 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,852 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-18 18:53:58] 2026-01-18 23:52:40,861 | INFO     | job 6966866872 has completed (purged errors)
[2026-01-18 18:53:58] 2026-01-18 23:52:40,865 | INFO     | overall cleanup function is called
[2026-01-18 18:53:58] 2026-01-18 23:52:41,917 | INFO     | --- collectZombieJob: --- 10, [2096579]
[2026-01-18 18:53:58] 2026-01-18 23:52:41,918 | INFO     | zombie collector waiting for pid 2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:41,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-18 18:53:58] 2026-01-18 23:52:41,918 | INFO     | collected zombie processes
[2026-01-18 18:53:58] 2026-01-18 23:52:41,918 | INFO     | will attempt to kill all subprocesses of pid=2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:44,505 | INFO     | process IDs to be killed: [2096579] (in reverse order)
[2026-01-18 18:53:58] 2026-01-18 23:52:45,092 | WARNING  | found no corresponding commands to process id(s)
[2026-01-18 18:53:58] 2026-01-18 23:52:45,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-18 18:53:58] 2026-01-18 23:52:45,240 | INFO     | did not find any defunct processes belonging to 2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:45,432 | INFO     | did not find any defunct processes belonging to 2096579
[2026-01-18 18:53:58] 2026-01-18 23:52:45,446 | INFO     | ready for new job
[2026-01-18 18:53:58] 2026-01-18 23:52:45,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-18 18:53:58] 2026-01-18 23:52:45,547 | INFO     | ***************************************
[2026-01-18 18:53:58] 2026-01-18 23:52:45,547 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-18 18:53:58] 2026-01-18 23:52:45,561 | INFO     | ***************************************
[2026-01-18 18:53:58] 2026-01-18 23:52:45,561 | INFO     | 
[2026-01-18 18:53:58] 2026-01-18 23:52:45,619 | INFO     | architecture information:
[2026-01-18 18:53:58] 2026-01-18 23:52:45,627 | INFO     | executing command: cat /etc/os-release
[2026-01-18 18:53:58] 2026-01-18 23:52:45,786 | INFO     | cat /etc/os-release:
[2026-01-18 18:53:58] NAME="CentOS Linux"
[2026-01-18 18:53:58] VERSION="7 (Core)"
[2026-01-18 18:53:58] ID="centos"
[2026-01-18 18:53:58] ID_LIKE="rhel fedora"
[2026-01-18 18:53:58] VERSION_ID="7"
[2026-01-18 18:53:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-18 18:53:58] ANSI_COLOR="0;31"
[2026-01-18 18:53:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-18 18:53:58] HOME_URL="https://www.centos.org/"
[2026-01-18 18:53:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-18 18:53:58] 
[2026-01-18 18:53:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-18 18:53:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-18 18:53:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-18 18:53:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-18 18:53:58] 
[2026-01-18 18:53:58] 2026-01-18 23:52:45,787 | INFO     | ***************************************
[2026-01-18 18:53:58] 2026-01-18 23:52:46,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-18 18:53:58] 2026-01-18 23:52:46,391 | INFO     | sufficient remaining disk space (84600160256 B)
[2026-01-18 18:53:58] 2026-01-18 23:52:46,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-18 18:53:58] 2026-01-18 23:52:46,392 | INFO     | current server update state: UPDATING_FINAL
[2026-01-18 18:53:58] 2026-01-18 23:52:46,393 | INFO     | update_server=False
[2026-01-18 18:53:58] 2026-01-18 23:52:46,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-18 18:53:58] 2026-01-18 23:52:46,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-18 18:53:58] 2026-01-18 23:52:46,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-18 18:53:58] 2026-01-18 23:52:46,422 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-18 18:53:58] 2026-01-18 23:52:46,423 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-18 18:53:58] 2026-01-18 23:52:46,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-18 18:53:58] 2026-01-18 23:52:46,423 | INFO     | will abort loop
[2026-01-18 18:53:58] 2026-01-18 23:52:46,433 | INFO     | all data control threads have been joined
[2026-01-18 18:53:58] 2026-01-18 23:52:46,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-18 18:53:58] 2026-01-18 23:52:47,065 | INFO     | all job control threads have been joined
[2026-01-18 18:53:58] 2026-01-18 23:52:47,400 | INFO     | [job] retrieve thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:47,408 | INFO     | [job] queue monitor thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:47,430 | INFO     | [job] job monitor thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:47,442 | INFO     | [data] control thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:47,857 | INFO     | all payload control threads have been joined
[2026-01-18 18:53:58] 2026-01-18 23:52:48,038 | INFO     | [payload] validate_post thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,044 | INFO     | [payload] failed_post thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,072 | INFO     | [job] control thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,205 | INFO     | [payload] validate_pre thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,219 | INFO     | [job] validate thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,219 | INFO     | [data] copytool_in thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,224 | INFO     | [job] create_data_payload thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,419 | INFO     | [data] copytool_out thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,647 | INFO     | [payload] execute_payloads thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:48,863 | INFO     | [payload] control thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:52:50,778 | INFO     | [data] queue_monitor thread has finished
[2026-01-18 18:53:58] 2026-01-18 23:53:28,451 | INFO     | PID=2047875 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-18 18:53:58] 2026-01-18 23:53:28,451 | INFO     | .. there are 23 such processes running
[2026-01-18 18:53:58] 2026-01-18 23:53:28,468 | INFO     | found 0 job(s) in 20 queues
[2026-01-18 18:53:58] 2026-01-18 23:53:28,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-18 18:53:58] 2026-01-18 23:53:28,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-18 18:53:58] 2026-01-18 23:53:46,332 | INFO     | [monitor] cgroup control has ended
[2026-01-18 18:53:58] 2026-01-18 23:53:47,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342150600512)>', '<ExcThread(monitor, started 140341780920064)>']
[2026-01-18 18:53:58] 2026-01-18 23:53:48,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-18 18:53:58] 2026-01-18 23:53:48,746 | INFO     | [monitor] control thread has ended
[2026-01-18 18:53:58] 2026-01-18 23:53:52,801 | INFO     | all workflow threads have been joined
[2026-01-18 18:53:58] 2026-01-18 23:53:52,803 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-18 18:53:58] 2026-01-18 23:53:52,804 | INFO     | traces error code: 0
[2026-01-18 18:53:58] 2026-01-18 23:53:52,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-18 18:53:58] 2026-01-18 23:53:54,904 [wrapper] ==== pilot stdout END ====
[2026-01-18 18:53:58] 2026-01-18 23:53:54,941 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-18 18:53:58] 2026-01-18 23:53:54,999 [wrapper] pilotpid: 2047875
[2026-01-18 18:53:58] 2026-01-18 23:53:55,033 [wrapper] Pilot exit status: 0
[2026-01-18 18:53:58] 2026-01-18 23:53:55,190 [wrapper] pandaids: 6966866872 6966866872 6966866872
[2026-01-18 18:53:58] 2026-01-18 23:53:55,714 [wrapper] cleanup supervisor_pilot 1153778 2047876
[2026-01-18 18:53:58] 2026-01-18 23:53:55,755 [wrapper] Test setup, not cleaning
[2026-01-18 18:53:58] 2026-01-18 23:53:55,791 [wrapper] apfmon messages muted
[2026-01-18 18:53:58] 2026-01-18 23:53:55,826 [wrapper] ==== wrapper stdout END ====
[2026-01-18 18:53:58] 2026-01-18 23:53:55,893 [wrapper] ==== wrapper stderr END ====
[2026-01-18 18:53:58]  *** Error codes and diagnostics ***
[2026-01-18 18:53:58]     "exeErrorCode": 0,
[2026-01-18 18:53:58]     "exeErrorDiag": "",
[2026-01-18 18:53:58]     "pilotErrorCode": 0,
[2026-01-18 18:53:58]     "pilotErrorDiag": "",
[2026-01-18 18:53:58]  *** Listing of results directory ***
[2026-01-18 18:53:58] total 2452276
[2026-01-18 18:53:58] drwx------. 5 boincer umatlas       4096 Dec  3 09:30 pilot3
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:01 queuedata.json
[2026-01-18 18:53:58] -rwx------. 1 boincer umatlas      36322 Jan 12 04:01 runpilot2-wrapper.sh
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-18 18:53:58] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:09 run_atlas
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:09 job.xml
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322113786 Jan 12 04:09 EVNT.48118027._000361.pool.root.1
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322113786 Jan 12 04:09 ATLAS.root_0
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322648265 Jan 12 04:09 EVNT.48118027._000362.pool.root.1
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322648265 Jan 12 04:09 ATLAS.root_1
[2026-01-18 18:53:58] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:09 start_atlas.sh
[2026-01-18 18:53:58] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:09 shared
[2026-01-18 18:53:58] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 04:09 input.tar.gz
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:09 boinc_lockfile
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas       3436 Jan 15 05:38 pandaJob.out
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas         57 Jan 15 05:38 setup.sh.local
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas    1007559 Jan 15 05:38 agis_schedconf.cvmfs.json
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas        535 Jan 18 17:17 boinc_task_state.xml
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas 1156469304 Jan 18 18:45 HITS.48187943._001761.pool.root.1
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas       6861 Jan 18 18:49 init_data.xml
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas       1071 Jan 18 18:49 memory_monitor_summary.json
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas    1516246 Jan 18 18:50 agis_ddmendpoints.agis.ALL.json
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas    4568535 Jan 18 18:51 log.48187943._001761.job.log.tgz.1
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas      26833 Jan 18 18:52 heartbeat.json
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas         97 Jan 18 18:53 pilot_heartbeat.json
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas       5010 Jan 18 18:53 pilotlog.txt
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas       8192 Jan 18 18:53 boinc_mmap_file
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas         31 Jan 18 18:53 wrapper_checkpoint.txt
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas   25996638 Jan 18 18:53 log.48187943._001761.job.log.1
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas        353 Jan 18 18:53 output.list
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas        620 Jan 18 18:53 runtime_log
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas   30607360 Jan 18 18:53 result.tar.gz
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas       9576 Jan 18 18:53 runtime_log.err
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas        924 Jan 18 18:53 mo6KDm1ySz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxOnKDmMAFoUn.diag
[2026-01-18 18:53:58] -rw-r--r--. 1 boincer umatlas      26492 Jan 18 18:53 stderr.txt
[2026-01-18 18:53:58] HITS file was successfully produced:
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas 1156469304 Jan 18 18:45 shared/HITS.pool.root.1
[2026-01-18 18:53:58]  *** Contents of shared directory: ***
[2026-01-18 18:53:58] total 1789524
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322113786 Jan 12 04:09 ATLAS.root_0
[2026-01-18 18:53:58] -rw-r--r--. 3 boincer umatlas  322648265 Jan 12 04:09 ATLAS.root_1
[2026-01-18 18:53:58] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:09 start_atlas.sh
[2026-01-18 18:53:58] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 04:09 input.tar.gz
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas 1156469304 Jan 18 18:45 HITS.pool.root.1
[2026-01-18 18:53:58] -rw-------. 1 boincer umatlas   30607360 Jan 18 18:53 result.tar.gz
18:54:00 (2025348): run_atlas exited; CPU time 832818.397017
18:54:00 (2025348): called boinc_finish(0)

</stderr_txt>
]]>

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