Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:30 (129359): wrapper (7.7.26015): starting
04:20:30 (129359): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 04:20:30] Arguments: --nthreads 9
[2026-01-12 04:20:30] Threads: 9
[2026-01-12 04:20:30] Checking for CVMFS
[2026-01-12 04:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:20:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:20:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:20:31] 2.13.3.0 7038 27010 157908 155047 3 77 34661952 40960000 16528 16776704 0 42382333 99.756 28804711 45599 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 04:20:31] CVMFS is ok
[2026-01-12 04:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:20:31] Further information can be found at the LHC@home message board.
[2026-01-12 04:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:20:31] Checking for apptainer binary...
[2026-01-12 04:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:20:31] Running /usr/bin/apptainer --version
[2026-01-12 04:20:31] apptainer version 1.4.5-2.el9
[2026-01-12 04:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:20:32] c-212-4.aglt2.org
[2026-01-12 04:20:32] apptainer works
[2026-01-12 04:20:32] Set ATHENA_PROC_NUMBER=9
[2026-01-12 04:20:32] Set ATHENA_CORE_NUMBER=9
[2026-01-12 04:20:32] Starting ATLAS job with PandaID=6966865309
[2026-01-12 04:20:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 06:59:59]  *** The last 200 lines of the pilot log: ***
[2026-01-13 06:59:59] 2026-01-13 11:58:54,389 | INFO     | extracted standard info from prmon json
[2026-01-13 06:59:59] 2026-01-13 11:58:54,389 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 06:59:59] 2026-01-13 11:58:54,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 06:59:59] 2026-01-13 11:58:54,409 | INFO     | fitting pss+swap vs Time
[2026-01-13 06:59:59] 2026-01-13 11:58:54,410 | INFO     | sum of square deviations: 1200009295613.674
[2026-01-13 06:59:59] 2026-01-13 11:58:54,457 | INFO     | sum of deviations: 9172120128784.57
[2026-01-13 06:59:59] 2026-01-13 11:58:54,458 | INFO     | mean x: 1768257610.92293
[2026-01-13 06:59:59] 2026-01-13 11:58:54,458 | INFO     | mean y: 3550523.14522293
[2026-01-13 06:59:59] 2026-01-13 11:58:54,458 | INFO     | intersect: -13511904136.502756
[2026-01-13 06:59:59] 2026-01-13 11:58:54,459 | INFO     | chi2: 12.150146329702492
[2026-01-13 06:59:59] 2026-01-13 11:58:54,461 | INFO     | sum of square deviations: 1188582064781.7278
[2026-01-13 06:59:59] 2026-01-13 11:58:54,507 | INFO     | sum of deviations: 9689637067681.994
[2026-01-13 06:59:59] 2026-01-13 11:58:54,507 | INFO     | mean x: 1768257458.430671
[2026-01-13 06:59:59] 2026-01-13 11:58:54,507 | INFO     | mean y: 3557425.875399361
[2026-01-13 06:59:59] 2026-01-13 11:58:54,507 | INFO     | intersect: -14411747601.936409
[2026-01-13 06:59:59] 2026-01-13 11:58:54,509 | INFO     | chi2: 9.928864483890806
[2026-01-13 06:59:59] 2026-01-13 11:58:54,509 | INFO     | current chi2=9.928864483890806 (change=18.281934929306132 %)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,509 | INFO     | right removable region: 1564
[2026-01-13 06:59:59] 2026-01-13 11:58:54,510 | INFO     | sum of square deviations: 1188579744341.7283
[2026-01-13 06:59:59] 2026-01-13 11:58:54,555 | INFO     | sum of deviations: 8417325414367.329
[2026-01-13 06:59:59] 2026-01-13 11:58:54,556 | INFO     | mean x: 1768257763.430671
[2026-01-13 06:59:59] 2026-01-13 11:58:54,556 | INFO     | mean y: 3560593.3392971247
[2026-01-13 06:59:59] 2026-01-13 11:58:54,556 | INFO     | intersect: -12518948798.338528
[2026-01-13 06:59:59] 2026-01-13 11:58:54,557 | INFO     | chi2: 8.180826406280817
[2026-01-13 06:59:59] 2026-01-13 11:58:54,557 | INFO     | current chi2=8.180826406280817 (change=32.66890633010893 %)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,558 | INFO     | sum of square deviations: 1177222985132.0938
[2026-01-13 06:59:59] 2026-01-13 11:58:54,600 | INFO     | sum of deviations: 7696319882394.874
[2026-01-13 06:59:59] 2026-01-13 11:58:54,600 | INFO     | mean x: 1768257915.9384615
[2026-01-13 06:59:59] 2026-01-13 11:58:54,600 | INFO     | mean y: 3570276.258974359
[2026-01-13 06:59:59] 2026-01-13 11:58:54,600 | INFO     | intersect: -11556753237.22752
[2026-01-13 06:59:59] 2026-01-13 11:58:54,601 | INFO     | chi2: 4.648315060827736
[2026-01-13 06:59:59] 2026-01-13 11:58:54,601 | INFO     | current chi2=4.648315060827736 (change=43.180372862343106 %)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,603 | INFO     | sum of square deviations: 1165938785422.2673
[2026-01-13 06:59:59] 2026-01-13 11:58:54,646 | INFO     | sum of deviations: 7145529616986.074
[2026-01-13 06:59:59] 2026-01-13 11:58:54,646 | INFO     | mean x: 1768258068.4463022
[2026-01-13 06:59:59] 2026-01-13 11:58:54,646 | INFO     | mean y: 3577718.0546623794
[2026-01-13 06:59:59] 2026-01-13 11:58:54,646 | INFO     | intersect: -10833303734.500824
[2026-01-13 06:59:59] 2026-01-13 11:58:54,647 | INFO     | chi2: 2.684891873306976
[2026-01-13 06:59:59] 2026-01-13 11:58:54,647 | INFO     | current chi2=2.684891873306976 (change=42.23946014475036 %)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,649 | INFO     | sum of square deviations: 1154727481189.1753
[2026-01-13 06:59:59] 2026-01-13 11:58:54,696 | INFO     | sum of deviations: 6951102535221.785
[2026-01-13 06:59:59] 2026-01-13 11:58:54,696 | INFO     | mean x: 1768258220.9503226
[2026-01-13 06:59:59] 2026-01-13 11:58:54,696 | INFO     | mean y: 3580360.750322581
[2026-01-13 06:59:59] 2026-01-13 11:58:54,696 | INFO     | intersect: -10640787598.620085
[2026-01-13 06:59:59] 2026-01-13 11:58:54,698 | INFO     | chi2: 2.458219361866429
[2026-01-13 06:59:59] 2026-01-13 11:58:54,698 | INFO     | current chi2=2.458219361866429 (change=8.442519182768986 %)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,698 | INFO     | left removable region: 40
[2026-01-13 06:59:59] 2026-01-13 11:58:54,699 | INFO     | sum of square deviations: 1097589590335.791
[2026-01-13 06:59:59] 2026-01-13 11:58:54,741 | INFO     | sum of deviations: 7069919104515.708
[2026-01-13 06:59:59] 2026-01-13 11:58:54,742 | INFO     | mean x: 1768258647.9619422
[2026-01-13 06:59:59] 2026-01-13 11:58:54,742 | INFO     | mean y: 3592515.408792651
[2026-01-13 06:59:59] 2026-01-13 11:58:54,742 | INFO     | intersect: -11386316524.386877
[2026-01-13 06:59:59] 2026-01-13 11:58:54,743 | INFO     | chi2: 0.16419330134998703
[2026-01-13 06:59:59] 2026-01-13 11:58:54,743 | INFO     | current memory leak: 6.44 B/s (using 1524 data points, chi2=0.16)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | could have reported an average CPU frequency of 3207 MHz (56 samples)
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | ..............................
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . Timing measurements:
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . get job = 0 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . initial setup = 2 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . payload setup = 33 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . stage-in = 0 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . payload execution = 95780 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . stage-out = 4 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | . log creation = 0 s
[2026-01-13 06:59:59] 2026-01-13 11:58:54,745 | INFO     | ..............................
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | 
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | job summary report
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | --------------------------------------------------
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | PanDA job id: 6966865309
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | task id: 48187943
[2026-01-13 06:59:59] 2026-01-13 11:58:55,026 | INFO     | errors: (none)
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | pilot state: finished 
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | transexitcode: 0
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | exeerrorcode: 0
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | exeerrordiag: 
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | exitcode: 0
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | exitmsg: OK
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | cpuconsumptiontime: 224550 s
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | nevents: 2050
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | neventsw: 0
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | pid: 142374
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | pgrp: 142374
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | corecount: 9
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | event service: False
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | sizes: {0: 2286157, 1: 2287013, 12: 2287013, 18: 2287335, 23: 2287363, 95818: 2376880, 95823: 2384822, 95828: 2385012}
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | --------------------------------------------------
[2026-01-13 06:59:59] 2026-01-13 11:58:55,027 | INFO     | 
[2026-01-13 06:59:59] 2026-01-13 11:58:55,028 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 06:59:59] 2026-01-13 11:58:55,048 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,048 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,048 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,048 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 06:59:59] 2026-01-13 11:58:55,050 | INFO     | job 6966865309 has completed (purged errors)
[2026-01-13 06:59:59] 2026-01-13 11:58:55,050 | INFO     | overall cleanup function is called
[2026-01-13 06:59:59] 2026-01-13 11:58:56,068 | INFO     | --- collectZombieJob: --- 10, [142374]
[2026-01-13 06:59:59] 2026-01-13 11:58:56,068 | INFO     | zombie collector waiting for pid 142374
[2026-01-13 06:59:59] 2026-01-13 11:58:56,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 06:59:59] 2026-01-13 11:58:56,068 | INFO     | collected zombie processes
[2026-01-13 06:59:59] 2026-01-13 11:58:56,069 | INFO     | will attempt to kill all subprocesses of pid=142374
[2026-01-13 06:59:59] 2026-01-13 11:58:56,370 | INFO     | process IDs to be killed: [142374] (in reverse order)
[2026-01-13 06:59:59] 2026-01-13 11:58:56,481 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 06:59:59] 2026-01-13 11:58:56,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 06:59:59] 2026-01-13 11:58:56,495 | INFO     | did not find any defunct processes belonging to 142374
[2026-01-13 06:59:59] 2026-01-13 11:58:56,507 | INFO     | did not find any defunct processes belonging to 142374
[2026-01-13 06:59:59] 2026-01-13 11:58:56,507 | INFO     | ready for new job
[2026-01-13 06:59:59] 2026-01-13 11:58:56,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 06:59:59] 2026-01-13 11:58:56,513 | INFO     | ***************************************
[2026-01-13 06:59:59] 2026-01-13 11:58:56,513 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 06:59:59] 2026-01-13 11:58:56,514 | INFO     | ***************************************
[2026-01-13 06:59:59] 2026-01-13 11:58:56,514 | INFO     | 
[2026-01-13 06:59:59] 2026-01-13 11:58:56,518 | INFO     | architecture information:
[2026-01-13 06:59:59] 2026-01-13 11:58:56,519 | INFO     | executing command: cat /etc/os-release
[2026-01-13 06:59:59] 2026-01-13 11:58:56,537 | INFO     | cat /etc/os-release:
[2026-01-13 06:59:59] NAME="CentOS Linux"
[2026-01-13 06:59:59] VERSION="7 (Core)"
[2026-01-13 06:59:59] ID="centos"
[2026-01-13 06:59:59] ID_LIKE="rhel fedora"
[2026-01-13 06:59:59] VERSION_ID="7"
[2026-01-13 06:59:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 06:59:59] ANSI_COLOR="0;31"
[2026-01-13 06:59:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 06:59:59] HOME_URL="https://www.centos.org/"
[2026-01-13 06:59:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 06:59:59] 
[2026-01-13 06:59:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 06:59:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 06:59:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 06:59:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 06:59:59] 
[2026-01-13 06:59:59] 2026-01-13 11:58:56,538 | INFO     | ***************************************
[2026-01-13 06:59:59] 2026-01-13 11:58:57,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 06:59:59] 2026-01-13 11:58:57,059 | INFO     | sufficient remaining disk space (127969263616 B)
[2026-01-13 06:59:59] 2026-01-13 11:58:57,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 06:59:59] 2026-01-13 11:58:57,059 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 06:59:59] 2026-01-13 11:58:57,059 | INFO     | update_server=False
[2026-01-13 06:59:59] 2026-01-13 11:58:57,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 06:59:59] 2026-01-13 11:58:57,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 06:59:59] 2026-01-13 11:58:57,192 | INFO     | aborting loop
[2026-01-13 06:59:59] 2026-01-13 11:58:57,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 06:59:59] 2026-01-13 11:58:57,953 | INFO     | all data control threads have been joined
[2026-01-13 06:59:59] 2026-01-13 11:58:58,064 | INFO     | [job] retrieve thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,076 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,198 | INFO     | [job] job monitor thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,523 | INFO     | all payload control threads have been joined
[2026-01-13 06:59:59] 2026-01-13 11:58:58,533 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,600 | INFO     | all job control threads have been joined
[2026-01-13 06:59:59] 2026-01-13 11:58:58,951 | INFO     | [payload] failed_post thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,958 | INFO     | [data] control thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:58,966 | INFO     | [data] copytool_in thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,085 | INFO     | [payload] validate_post thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,180 | INFO     | [job] validate thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,422 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,528 | INFO     | [payload] control thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,600 | INFO     | [job] control thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,623 | INFO     | [data] copytool_out thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:58:59,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 06:59:59] 2026-01-13 11:59:00,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 06:59:59] 2026-01-13 11:59:00,835 | INFO     | [job] queue monitor thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:59:04,563 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 06:59:59] 2026-01-13 11:59:26,673 | INFO     | PID=133153 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 06:59:59] 2026-01-13 11:59:26,674 | INFO     | .. there are 13 such processes running
[2026-01-13 06:59:59] 2026-01-13 11:59:26,675 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 06:59:59] 2026-01-13 11:59:26,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 06:59:59] 2026-01-13 11:59:26,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 06:59:59] 2026-01-13 11:59:53,467 | INFO     | [monitor] cgroup control has ended
[2026-01-13 06:59:59] 2026-01-13 11:59:53,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817075803968)>', '<ExcThread(monitor, started 139816729560832)>']
[2026-01-13 06:59:59] 2026-01-13 11:59:54,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 06:59:59] 2026-01-13 11:59:54,779 | INFO     | [monitor] control thread has ended
[2026-01-13 06:59:59] 2026-01-13 11:59:58,843 | INFO     | all workflow threads have been joined
[2026-01-13 06:59:59] 2026-01-13 11:59:58,843 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 06:59:59] 2026-01-13 11:59:58,843 | INFO     | traces error code: 0
[2026-01-13 06:59:59] 2026-01-13 11:59:58,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 06:59:59] 2026-01-13 11:59:58,950 [wrapper] ==== pilot stdout END ====
[2026-01-13 06:59:59] 2026-01-13 11:59:58,952 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 06:59:59] 2026-01-13 11:59:58,954 [wrapper] pilotpid: 133153
[2026-01-13 06:59:59] 2026-01-13 11:59:58,955 [wrapper] Pilot exit status: 0
[2026-01-13 06:59:59] 2026-01-13 11:59:58,963 [wrapper] pandaids: 6966865309
[2026-01-13 06:59:59] 2026-01-13 11:59:59,044 [wrapper] cleanup supervisor_pilot 3583635 133154
[2026-01-13 06:59:59] 2026-01-13 11:59:59,046 [wrapper] Test setup, not cleaning
[2026-01-13 06:59:59] 2026-01-13 11:59:59,049 [wrapper] apfmon messages muted
[2026-01-13 06:59:59] 2026-01-13 11:59:59,051 [wrapper] ==== wrapper stdout END ====
[2026-01-13 06:59:59] 2026-01-13 11:59:59,053 [wrapper] ==== wrapper stderr END ====
[2026-01-13 06:59:59]  *** Error codes and diagnostics ***
[2026-01-13 06:59:59]     "exeErrorCode": 0,
[2026-01-13 06:59:59]     "exeErrorDiag": "",
[2026-01-13 06:59:59]     "pilotErrorCode": 0,
[2026-01-13 06:59:59]     "pilotErrorDiag": "",
[2026-01-13 06:59:59]  *** Listing of results directory ***
[2026-01-13 06:59:59] total 1810256
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-13 06:59:59] -rwx------. 1 boincer umatlas      36322 Jan 12 04:00 runpilot2-wrapper.sh
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:01 queuedata.json
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 06:59:59] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:20 run_atlas
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:20 job.xml
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas  322751110 Jan 12 04:20 EVNT.48118027._000348.pool.root.1
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas  320001399 Jan 12 04:20 EVNT.48118027._000349.pool.root.1
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:20 start_atlas.sh
[2026-01-13 06:59:59] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:20 shared
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas     592707 Jan 12 04:20 input.tar.gz
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:20 boinc_lockfile
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas       3436 Jan 12 04:20 pandaJob.out
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas         57 Jan 12 04:20 setup.sh.local
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas     987688 Jan 12 04:21 agis_schedconf.cvmfs.json
[2026-01-13 06:59:59] drwx------. 5 boincer umatlas       4096 Jan 12 04:21 pilot3
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas        533 Jan 13 06:52 boinc_task_state.xml
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas 1175647969 Jan 13 06:58 HITS.48187943._001698.pool.root.1
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas       1047 Jan 13 06:58 memory_monitor_summary.json
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas    1516240 Jan 13 06:58 agis_ddmendpoints.agis.ALL.json
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas    3077147 Jan 13 06:58 log.48187943._001698.job.log.tgz.1
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas      27958 Jan 13 06:58 heartbeat.json
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas       6957 Jan 13 06:59 init_data.xml
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas         95 Jan 13 06:59 pilot_heartbeat.json
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas         29 Jan 13 06:59 wrapper_checkpoint.txt
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 06:59 boinc_mmap_file
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas       4824 Jan 13 06:59 pilotlog.txt
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas   12588137 Jan 13 06:59 log.48187943._001698.job.log.1
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas        353 Jan 13 06:59 output.list
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas        620 Jan 13 06:59 runtime_log
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas   15708160 Jan 13 06:59 result.tar.gz
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas       9390 Jan 13 06:59 runtime_log.err
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas        660 Jan 13 06:59 oDZMDm2xSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUNnKDmsM13Mm.diag
[2026-01-13 06:59:59] -rw-r--r--. 1 boincer umatlas      20987 Jan 13 06:59 stderr.txt
[2026-01-13 06:59:59] HITS file was successfully produced:
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas 1175647969 Jan 13 06:58 shared/HITS.pool.root.1
[2026-01-13 06:59:59]  *** Contents of shared directory: ***
[2026-01-13 06:59:59] total 1791736
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas  322751110 Jan 12 04:20 ATLAS.root_0
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas  320001399 Jan 12 04:20 ATLAS.root_1
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:20 start_atlas.sh
[2026-01-13 06:59:59] -rw-r--r--. 2 boincer umatlas     592707 Jan 12 04:20 input.tar.gz
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas 1175647969 Jan 13 06:58 HITS.pool.root.1
[2026-01-13 06:59:59] -rw-------. 1 boincer umatlas   15708160 Jan 13 06:59 result.tar.gz
07:00:00 (129359): run_atlas exited; CPU time 224922.649773
07:00:00 (129359): called boinc_finish(0)

</stderr_txt>
]]>

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