Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:09:43 (3425838): wrapper (7.7.26015): starting
04:09:43 (3425838): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 04:09:43] Arguments: --nthreads 9
[2026-01-12 04:09:43] Threads: 9
[2026-01-12 04:09:43] Checking for CVMFS
[2026-01-12 04:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:09:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:09:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:09:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:09:43] 2.13.3.0 11900 97532 429172 155045 2 607 32921491 32935937 22627 16776704 0 413331150 99.490 517219333 32822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:09:43] CVMFS is ok
[2026-01-12 04:09:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:09:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:09:43] Further information can be found at the LHC@home message board.
[2026-01-12 04:09:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:09:43] Checking for apptainer binary...
[2026-01-12 04:09:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:09:43] Running /usr/bin/apptainer --version
[2026-01-12 04:09:43] apptainer version 1.4.5-2.el9
[2026-01-12 04:09:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:09:43] c6-12-27-1.aglt2.org
[2026-01-12 04:09:43] apptainer works
[2026-01-12 04:09:43] Set ATHENA_PROC_NUMBER=9
[2026-01-12 04:09:43] Set ATHENA_CORE_NUMBER=9
[2026-01-12 04:09:43] Starting ATLAS job with PandaID=6966862674
[2026-01-12 04:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:20:32]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:20:32] 2026-01-13 08:19:17,226 | INFO     | time since job start (83362s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:17,441 | INFO     | monitor loop #4905: job 0:6966862674 is in state 'finished'
[2026-01-13 03:20:32] 2026-01-13 08:19:17,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:20:32] 2026-01-13 08:19:19,235 | INFO     | time since job start (83364s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:19,946 | INFO     | monitor loop #4906: job 0:6966862674 is in state 'finished'
[2026-01-13 03:20:32] 2026-01-13 08:19:19,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:20:32] 2026-01-13 08:19:21,263 | INFO     | time since job start (83366s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:22,453 | INFO     | monitor loop #4907: job 0:6966862674 is in state 'finished'
[2026-01-13 03:20:32] 2026-01-13 08:19:22,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:20:32] 2026-01-13 08:19:23,272 | INFO     | time since job start (83368s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:24,957 | INFO     | monitor loop #4908: job 0:6966862674 is in state 'finished'
[2026-01-13 03:20:32] 2026-01-13 08:19:24,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:20:32] 2026-01-13 08:19:25,279 | INFO     | time since job start (83370s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:27,286 | INFO     | time since job start (83372s) is within the limit (349056.0s)
[2026-01-13 03:20:32] 2026-01-13 08:19:27,462 | INFO     | monitor loop #4909: job 0:6966862674 is in state 'finished'
[2026-01-13 03:20:32] 2026-01-13 08:19:27,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:20:32] 2026-01-13 08:19:27,977 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 03:20:32] 2026-01-13 08:19:28,001 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2755.265385416667
[2026-01-13 03:20:32] 2026-01-13 08:19:28,056 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966862674/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,056 | INFO     | extracted standard info from prmon json
[2026-01-13 03:20:32] 2026-01-13 08:19:28,057 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 03:20:32] 2026-01-13 08:19:28,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 03:20:32] 2026-01-13 08:19:28,200 | INFO     | fitting pss+swap vs Time
[2026-01-13 03:20:32] 2026-01-13 08:19:28,202 | INFO     | sum of square deviations: 790390670080.6864
[2026-01-13 03:20:32] 2026-01-13 08:19:28,252 | INFO     | sum of deviations: 2280668602838.243
[2026-01-13 03:20:32] 2026-01-13 08:19:28,252 | INFO     | mean x: 1768250663.545388
[2026-01-13 03:20:32] 2026-01-13 08:19:28,252 | INFO     | mean y: 3662186.657393851
[2026-01-13 03:20:32] 2026-01-13 08:19:28,252 | INFO     | intersect: -5098616879.825226
[2026-01-13 03:20:32] 2026-01-13 08:19:28,254 | INFO     | chi2: 18.93784367498507
[2026-01-13 03:20:32] 2026-01-13 08:19:28,260 | INFO     | sum of square deviations: 781744641816.6426
[2026-01-13 03:20:32] 2026-01-13 08:19:28,344 | INFO     | sum of deviations: 2983780717709.044
[2026-01-13 03:20:32] 2026-01-13 08:19:28,348 | INFO     | mean x: 1768250511.056576
[2026-01-13 03:20:32] 2026-01-13 08:19:28,348 | INFO     | mean y: 3674586.0124908155
[2026-01-13 03:20:32] 2026-01-13 08:19:28,349 | INFO     | intersect: -6745424156.396633
[2026-01-13 03:20:32] 2026-01-13 08:19:28,350 | INFO     | chi2: 14.302181317842525
[2026-01-13 03:20:32] 2026-01-13 08:19:28,350 | INFO     | current chi2=14.302181317842525 (change=24.47830089159399 %)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,351 | INFO     | right removable region: 1360
[2026-01-13 03:20:32] 2026-01-13 08:19:28,356 | INFO     | sum of square deviations: 781742187303.7572
[2026-01-13 03:20:32] 2026-01-13 08:19:28,458 | INFO     | sum of deviations: 1755784789576.5894
[2026-01-13 03:20:32] 2026-01-13 08:19:28,458 | INFO     | mean x: 1768250816.0558412
[2026-01-13 03:20:32] 2026-01-13 08:19:28,458 | INFO     | mean y: 3671434.9132990446
[2026-01-13 03:20:32] 2026-01-13 08:19:28,459 | INFO     | intersect: -3967801433.5208488
[2026-01-13 03:20:32] 2026-01-13 08:19:28,464 | INFO     | chi2: 16.321413184963117
[2026-01-13 03:20:32] 2026-01-13 08:19:28,465 | INFO     | current chi2=16.321413184963117 (change=13.815883872132645 %)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,465 | INFO     | left removable region: 10
[2026-01-13 03:20:32] 2026-01-13 08:19:28,466 | INFO     | sum of square deviations: 762942046076.8146
[2026-01-13 03:20:32] 2026-01-13 08:19:28,597 | INFO     | sum of deviations: 2443340295234.1597
[2026-01-13 03:20:32] 2026-01-13 08:19:28,597 | INFO     | mean x: 1768250785.5703704
[2026-01-13 03:20:32] 2026-01-13 08:19:28,597 | INFO     | mean y: 3688463.514074074
[2026-01-13 03:20:32] 2026-01-13 08:19:28,597 | INFO     | intersect: -5659177305.491601
[2026-01-13 03:20:32] 2026-01-13 08:19:28,599 | INFO     | chi2: 10.88894395903029
[2026-01-13 03:20:32] 2026-01-13 08:19:28,599 | INFO     | current memory leak: 3.20 B/s (using 1350 data points, chi2=10.89)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,604 | INFO     | could have reported an average CPU frequency of 2721 MHz (49 samples)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | ..............................
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . Timing measurements:
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . get job = 0 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . initial setup = 2 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . payload setup = 11 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . stage-in = 0 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . payload execution = 83288 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . stage-out = 11 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | . log creation = 5 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,605 | INFO     | ..............................
[2026-01-13 03:20:32] 2026-01-13 08:19:28,825 | INFO     | 
[2026-01-13 03:20:32] 2026-01-13 08:19:28,825 | INFO     | job summary report
[2026-01-13 03:20:32] 2026-01-13 08:19:28,825 | INFO     | --------------------------------------------------
[2026-01-13 03:20:32] 2026-01-13 08:19:28,825 | INFO     | PanDA job id: 6966862674
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | task id: 48187943
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | errors: (none)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | pilot state: finished 
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | transexitcode: 0
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | exeerrorcode: 0
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | exeerrordiag: 
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | exitcode: 0
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | exitmsg: OK
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | cpuconsumptiontime: 310249 s
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | nevents: 2050
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | neventsw: 0
[2026-01-13 03:20:32] 2026-01-13 08:19:28,826 | INFO     | pid: 3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | pgrp: 3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | corecount: 9
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | event service: False
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | sizes: {0: 2284623, 5: 2284885, 11: 2284941, 83304: 2367085, 83318: 2376083, 83322: 2376139, 83358: 2376513}
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | --------------------------------------------------
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | 
[2026-01-13 03:20:32] 2026-01-13 08:19:28,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 03:20:32] 2026-01-13 08:19:28,927 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | job 6966862674 has completed (purged errors)
[2026-01-13 03:20:32] 2026-01-13 08:19:28,929 | INFO     | overall cleanup function is called
[2026-01-13 03:20:32] 2026-01-13 08:19:29,782 | INFO     | PID=3429589 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 03:20:32] 2026-01-13 08:19:29,782 | INFO     | .. there are 26 such processes running
[2026-01-13 03:20:32] 2026-01-13 08:19:29,988 | INFO     | --- collectZombieJob: --- 10, [3444411]
[2026-01-13 03:20:32] 2026-01-13 08:19:29,988 | INFO     | zombie collector waiting for pid 3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:29,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 03:20:32] 2026-01-13 08:19:29,989 | INFO     | collected zombie processes
[2026-01-13 03:20:32] 2026-01-13 08:19:29,989 | INFO     | will attempt to kill all subprocesses of pid=3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:31,470 | INFO     | process IDs to be killed: [3444411] (in reverse order)
[2026-01-13 03:20:32] 2026-01-13 08:19:31,781 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 03:20:32] 2026-01-13 08:19:31,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 03:20:32] 2026-01-13 08:19:31,880 | INFO     | did not find any defunct processes belonging to 3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:31,945 | INFO     | did not find any defunct processes belonging to 3444411
[2026-01-13 03:20:32] 2026-01-13 08:19:31,945 | INFO     | ready for new job
[2026-01-13 03:20:32] 2026-01-13 08:19:31,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 03:20:32] 2026-01-13 08:19:31,963 | INFO     | ***************************************
[2026-01-13 03:20:32] 2026-01-13 08:19:31,963 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 03:20:32] 2026-01-13 08:19:31,963 | INFO     | ***************************************
[2026-01-13 03:20:32] 2026-01-13 08:19:31,963 | INFO     | 
[2026-01-13 03:20:32] 2026-01-13 08:19:31,977 | INFO     | architecture information:
[2026-01-13 03:20:32] 2026-01-13 08:19:31,984 | INFO     | executing command: cat /etc/os-release
[2026-01-13 03:20:32] 2026-01-13 08:19:32,036 | INFO     | cat /etc/os-release:
[2026-01-13 03:20:32] NAME="CentOS Linux"
[2026-01-13 03:20:32] VERSION="7 (Core)"
[2026-01-13 03:20:32] ID="centos"
[2026-01-13 03:20:32] ID_LIKE="rhel fedora"
[2026-01-13 03:20:32] VERSION_ID="7"
[2026-01-13 03:20:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 03:20:32] ANSI_COLOR="0;31"
[2026-01-13 03:20:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 03:20:32] HOME_URL="https://www.centos.org/"
[2026-01-13 03:20:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 03:20:32] 
[2026-01-13 03:20:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 03:20:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 03:20:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 03:20:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 03:20:32] 
[2026-01-13 03:20:32] 2026-01-13 08:19:32,037 | INFO     | ***************************************
[2026-01-13 03:20:32] 2026-01-13 08:19:32,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 03:20:32] 2026-01-13 08:19:32,589 | INFO     | sufficient remaining disk space (84641054720 B)
[2026-01-13 03:20:32] 2026-01-13 08:19:32,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 03:20:32] 2026-01-13 08:19:32,590 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 03:20:32] 2026-01-13 08:19:32,590 | INFO     | update_server=False
[2026-01-13 03:20:32] 2026-01-13 08:19:32,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 03:20:32] 2026-01-13 08:19:32,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 03:20:32] 2026-01-13 08:19:32,781 | INFO     | all job control threads have been joined
[2026-01-13 03:20:32] 2026-01-13 08:19:33,178 | INFO     | all data control threads have been joined
[2026-01-13 03:20:32] 2026-01-13 08:19:33,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:20:32] 2026-01-13 08:19:33,537 | INFO     | aborting loop
[2026-01-13 03:20:32] 2026-01-13 08:19:33,596 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:33,787 | INFO     | [job] control thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:33,791 | INFO     | all payload control threads have been joined
[2026-01-13 03:20:32] 2026-01-13 08:19:33,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:20:32] 2026-01-13 08:19:33,854 | INFO     | [job] validate thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:33,956 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,046 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,184 | INFO     | [data] control thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,550 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,610 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,632 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,633 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,674 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,797 | INFO     | [payload] control thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,807 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:34,859 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:35,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:20:32] 2026-01-13 08:19:35,182 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:19:39,076 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:20:32] 2026-01-13 08:20:05,649 | INFO     | PID=3429589 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 03:20:32] 2026-01-13 08:20:05,649 | INFO     | .. there are 26 such processes running
[2026-01-13 03:20:32] 2026-01-13 08:20:05,650 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:20:32] 2026-01-13 08:20:05,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:20:32] 2026-01-13 08:20:05,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:20:32] 2026-01-13 08:20:24,250 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:20:32] 2026-01-13 08:20:24,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870062315328)>', '<ExcThread(monitor, started 139869292586752)>']
[2026-01-13 03:20:32] 2026-01-13 08:20:24,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:20:32] 2026-01-13 08:20:24,808 | INFO     | [monitor] control thread has ended
[2026-01-13 03:20:32] 2026-01-13 08:20:29,654 | INFO     | all workflow threads have been joined
[2026-01-13 03:20:32] 2026-01-13 08:20:29,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:20:32] 2026-01-13 08:20:29,655 | INFO     | traces error code: 0
[2026-01-13 03:20:32] 2026-01-13 08:20:29,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:20:32] 2026-01-13 08:20:30,835 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:20:32] 2026-01-13 08:20:30,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:20:32] 2026-01-13 08:20:30,892 [wrapper] pilotpid: 3429589
[2026-01-13 03:20:32] 2026-01-13 08:20:30,916 [wrapper] Pilot exit status: 0
[2026-01-13 03:20:32] 2026-01-13 08:20:31,093 [wrapper] pandaids: 6966862674
[2026-01-13 03:20:32] 2026-01-13 08:20:31,389 [wrapper] cleanup supervisor_pilot 3434194 3429590
[2026-01-13 03:20:32] 2026-01-13 08:20:31,413 [wrapper] Test setup, not cleaning
[2026-01-13 03:20:32] 2026-01-13 08:20:31,432 [wrapper] apfmon messages muted
[2026-01-13 03:20:32] 2026-01-13 08:20:31,472 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:20:32] 2026-01-13 08:20:31,506 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:20:32]  *** Error codes and diagnostics ***
[2026-01-13 03:20:32]     "exeErrorCode": 0,
[2026-01-13 03:20:32]     "exeErrorDiag": "",
[2026-01-13 03:20:32]     "pilotErrorCode": 0,
[2026-01-13 03:20:32]     "pilotErrorDiag": "",
[2026-01-13 03:20:32]  *** Listing of results directory ***
[2026-01-13 03:20:32] total 1505572
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-13 03:20:32] -rwx------. 1 boincer umatlas      36322 Jan 12 04:00 runpilot2-wrapper.sh
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 04:01 queuedata.json
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:20:32] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:09 run_atlas
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:09 job.xml
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas  322132885 Jan 12 04:09 EVNT.48118027._000283.pool.root.1
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:09 start_atlas.sh
[2026-01-13 03:20:32] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:09 shared
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 04:09 input.tar.gz
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:09 boinc_lockfile
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 04:09 pandaJob.out
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas         57 Jan 12 04:09 setup.sh.local
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas     987688 Jan 12 04:09 agis_schedconf.cvmfs.json
[2026-01-13 03:20:32] drwx------. 5 boincer umatlas       4096 Jan 12 04:09 pilot3
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas        533 Jan 13 02:50 boinc_task_state.xml
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas 1189147475 Jan 13 03:14 HITS.48187943._001379.pool.root.1
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas       6880 Jan 13 03:18 init_data.xml
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas       1057 Jan 13 03:18 memory_monitor_summary.json
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas    1516240 Jan 13 03:18 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas    2864519 Jan 13 03:18 log.48187943._001379.job.log.tgz.1
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas      27221 Jan 13 03:19 heartbeat.json
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas         95 Jan 13 03:20 pilot_heartbeat.json
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas         29 Jan 13 03:20 wrapper_checkpoint.txt
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 03:20 boinc_mmap_file
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas       4824 Jan 13 03:20 pilotlog.txt
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas   10370868 Jan 13 03:20 log.48187943._001379.job.log.1
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas        353 Jan 13 03:20 output.list
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas        620 Jan 13 03:20 runtime_log
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas   13271040 Jan 13 03:20 result.tar.gz
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas       9353 Jan 13 03:20 runtime_log.err
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas        662 Jan 13 03:20 QyBLDm2xSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoMnKDmQUzlcn.diag
[2026-01-13 03:20:32] -rw-r--r--. 1 boincer umatlas      21742 Jan 13 03:20 stderr.txt
[2026-01-13 03:20:32] HITS file was successfully produced:
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas 1189147475 Jan 13 03:14 shared/HITS.pool.root.1
[2026-01-13 03:20:32]  *** Contents of shared directory: ***
[2026-01-13 03:20:32] total 1489428
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas  322132885 Jan 12 04:09 ATLAS.root_0
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:09 start_atlas.sh
[2026-01-13 03:20:32] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 04:09 input.tar.gz
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas 1189147475 Jan 13 03:14 HITS.pool.root.1
[2026-01-13 03:20:32] -rw-------. 1 boincer umatlas   13271040 Jan 13 03:20 result.tar.gz
03:20:33 (3425838): run_atlas exited; CPU time 312967.888922
03:20:33 (3425838): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN