Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:11:41 (557055): wrapper (7.7.26015): starting
04:11:41 (557055): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 04:11:41] Arguments: --nthreads 8
[2026-01-12 04:11:41] Threads: 8
[2026-01-12 04:11:41] Checking for CVMFS
[2026-01-12 04:11:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:11:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:11:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:11:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:11:42] 2.13.3.0 7554 27001 226792 155045 0 359 28514065 40960000 20617 16776704 0 54800109 99.628 51504517 40027 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 04:11:42] CVMFS is ok
[2026-01-12 04:11:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:11:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:11:42] Further information can be found at the LHC@home message board.
[2026-01-12 04:11:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:11:43] Checking for apptainer binary...
[2026-01-12 04:11:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:11:43] Running /usr/bin/apptainer --version
[2026-01-12 04:11:43] apptainer version 1.4.5-2.el9
[2026-01-12 04:11:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:11:44] c-212-7.aglt2.org
[2026-01-12 04:11:44] apptainer works
[2026-01-12 04:11:44] Set ATHENA_PROC_NUMBER=8
[2026-01-12 04:11:44] Set ATHENA_CORE_NUMBER=8
[2026-01-12 04:11:44] Starting ATLAS job with PandaID=6966862161
[2026-01-12 04:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 16:10:14]  *** The last 200 lines of the pilot log: ***
[2026-01-13 16:10:14] 2026-01-13 21:09:29,361 | INFO     | job 6966862161 has finished - writing final server update
[2026-01-13 16:10:14] 2026-01-13 21:09:29,362 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 16:10:14] 2026-01-13 21:09:29,365 | INFO     | executing command: lscpu
[2026-01-13 16:10:14] 2026-01-13 21:09:29,504 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 16:10:14] 2026-01-13 21:09:29,557 | INFO     | number of running child processes to parent process 573106: 1
[2026-01-13 16:10:14] 2026-01-13 21:09:29,557 | INFO     | maximum number of monitored processes: 17
[2026-01-13 16:10:14] 2026-01-13 21:09:29,610 | INFO     | time since job start (129372s) is within the limit (349056.0s)
[2026-01-13 16:10:14] 2026-01-13 21:09:31,622 | INFO     | time since job start (129374s) is within the limit (349056.0s)
[2026-01-13 16:10:14] 2026-01-13 21:09:32,062 | INFO     | monitor loop #7782: job 0:6966862161 is in state 'finished'
[2026-01-13 16:10:14] 2026-01-13 21:09:32,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:10:14] 2026-01-13 21:09:33,629 | INFO     | time since job start (129376s) is within the limit (349056.0s)
[2026-01-13 16:10:14] 2026-01-13 21:09:34,568 | INFO     | monitor loop #7783: job 0:6966862161 is in state 'finished'
[2026-01-13 16:10:14] 2026-01-13 21:09:34,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:10:14] 2026-01-13 21:09:35,636 | INFO     | time since job start (129378s) is within the limit (349056.0s)
[2026-01-13 16:10:14] 2026-01-13 21:09:36,435 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 16:10:14] 2026-01-13 21:09:36,496 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3199.2933020833334
[2026-01-13 16:10:14] 2026-01-13 21:09:36,546 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6966862161/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 16:10:14] 2026-01-13 21:09:36,546 | INFO     | extracted standard info from prmon json
[2026-01-13 16:10:14] 2026-01-13 21:09:36,546 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 16:10:14] 2026-01-13 21:09:36,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 16:10:14] 2026-01-13 21:09:36,608 | INFO     | fitting pss+swap vs Time
[2026-01-13 16:10:14] 2026-01-13 21:09:36,611 | INFO     | sum of square deviations: 2946122608784.6436
[2026-01-13 16:10:14] 2026-01-13 21:09:36,885 | INFO     | sum of deviations: 63863510761260.13
[2026-01-13 16:10:14] 2026-01-13 21:09:36,890 | INFO     | mean x: 1768273986.6694996
[2026-01-13 16:10:14] 2026-01-13 21:09:36,890 | INFO     | mean y: 5039300.305949008
[2026-01-13 16:10:14] 2026-01-13 21:09:36,890 | INFO     | intersect: -38326082574.86609
[2026-01-13 16:10:14] 2026-01-13 21:09:36,892 | INFO     | chi2: 50.51944731085649
[2026-01-13 16:10:14] 2026-01-13 21:09:36,913 | INFO     | sum of square deviations: 2925307429785.2925
[2026-01-13 16:10:14] 2026-01-13 21:09:37,134 | INFO     | monitor loop #7784: job 0:6966862161 is in state 'finished'
[2026-01-13 16:10:14] 2026-01-13 21:09:37,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,308 | INFO     | sum of deviations: 65285559914850.68
[2026-01-13 16:10:14] 2026-01-13 21:09:37,308 | INFO     | mean x: 1768273834.172267
[2026-01-13 16:10:14] 2026-01-13 21:09:37,308 | INFO     | mean y: 5049718.514907714
[2026-01-13 16:10:14] 2026-01-13 21:09:37,308 | INFO     | intersect: -39458408436.78379
[2026-01-13 16:10:14] 2026-01-13 21:09:37,309 | INFO     | chi2: 46.037327245267996
[2026-01-13 16:10:14] 2026-01-13 21:09:37,310 | INFO     | current chi2=46.037327245267996 (change=8.872068686755608 %)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,310 | INFO     | right removable region: 2112
[2026-01-13 16:10:14] 2026-01-13 21:09:37,311 | INFO     | sum of square deviations: 2925305918815.2935
[2026-01-13 16:10:14] 2026-01-13 21:09:37,448 | INFO     | sum of deviations: 62247963615923.94
[2026-01-13 16:10:14] 2026-01-13 21:09:37,448 | INFO     | mean x: 1768274139.172267
[2026-01-13 16:10:14] 2026-01-13 21:09:37,448 | INFO     | mean y: 5051135.65404638
[2026-01-13 16:10:14] 2026-01-13 21:09:37,448 | INFO     | intersect: -37622283349.33269
[2026-01-13 16:10:14] 2026-01-13 21:09:37,449 | INFO     | chi2: 45.641630187701764
[2026-01-13 16:10:14] 2026-01-13 21:09:37,449 | INFO     | current chi2=45.641630187701764 (change=9.655325588066159 %)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,449 | INFO     | left removable region: 10
[2026-01-13 16:10:14] 2026-01-13 21:09:37,451 | INFO     | sum of square deviations: 2879856635410.5986
[2026-01-13 16:10:14] 2026-01-13 21:09:37,653 | INFO     | time since job start (129380s) is within the limit (349056.0s)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,659 | INFO     | sum of deviations: 62446162638101.66
[2026-01-13 16:10:14] 2026-01-13 21:09:37,660 | INFO     | mean x: 1768274108.6784015
[2026-01-13 16:10:14] 2026-01-13 21:09:37,660 | INFO     | mean y: 5075344.157944814
[2026-01-13 16:10:14] 2026-01-13 21:09:37,660 | INFO     | intersect: -38337782151.431305
[2026-01-13 16:10:14] 2026-01-13 21:09:37,662 | INFO     | chi2: 35.84933848486648
[2026-01-13 16:10:14] 2026-01-13 21:09:37,662 | INFO     | current memory leak: 21.68 B/s (using 2102 data points, chi2=35.85)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,663 | INFO     | could have reported an average CPU frequency of 3182 MHz (74 samples)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,663 | INFO     | ..............................
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . Timing measurements:
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . get job = 0 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . initial setup = 12 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . payload setup = 116 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . stage-in = 0 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . payload execution = 129178 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . stage-out = 4 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | . log creation = 1 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,664 | INFO     | ..............................
[2026-01-13 16:10:14] 2026-01-13 21:09:37,746 | INFO     | 
[2026-01-13 16:10:14] 2026-01-13 21:09:37,753 | INFO     | job summary report
[2026-01-13 16:10:14] 2026-01-13 21:09:37,753 | INFO     | --------------------------------------------------
[2026-01-13 16:10:14] 2026-01-13 21:09:37,753 | INFO     | PanDA job id: 6966862161
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | task id: 48187943
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | errors: (none)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | pilot state: finished 
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | transexitcode: 0
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | exeerrorcode: 0
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | exeerrordiag: 
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | exitcode: 0
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | exitmsg: OK
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | cpuconsumptiontime: 229827 s
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | nevents: 2050
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | neventsw: 0
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | pid: 573106
[2026-01-13 16:10:14] 2026-01-13 21:09:37,754 | INFO     | pgrp: 573106
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | corecount: 8
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | event service: False
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | sizes: {0: 2283795, 1: 2284480, 2: 2284679, 3: 2284679, 14: 2284707, 24: 2284735, 30: 2285153, 35: 2285181, 129295: 2390198, 129300: 2399252, 129311: 2399442}
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | --------------------------------------------------
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | 
[2026-01-13 16:10:14] 2026-01-13 21:09:37,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 16:10:14] 2026-01-13 21:09:37,830 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,832 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 16:10:14] 2026-01-13 21:09:37,841 | INFO     | job 6966862161 has completed (purged errors)
[2026-01-13 16:10:14] 2026-01-13 21:09:37,841 | INFO     | overall cleanup function is called
[2026-01-13 16:10:14] 2026-01-13 21:09:38,900 | INFO     | --- collectZombieJob: --- 10, [573106]
[2026-01-13 16:10:14] 2026-01-13 21:09:38,900 | INFO     | zombie collector waiting for pid 573106
[2026-01-13 16:10:14] 2026-01-13 21:09:38,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 16:10:14] 2026-01-13 21:09:38,901 | INFO     | collected zombie processes
[2026-01-13 16:10:14] 2026-01-13 21:09:38,901 | INFO     | will attempt to kill all subprocesses of pid=573106
[2026-01-13 16:10:14] 2026-01-13 21:09:39,979 | INFO     | process IDs to be killed: [573106] (in reverse order)
[2026-01-13 16:10:14] 2026-01-13 21:09:40,234 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 16:10:14] 2026-01-13 21:09:40,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 16:10:14] 2026-01-13 21:09:40,254 | INFO     | did not find any defunct processes belonging to 573106
[2026-01-13 16:10:14] 2026-01-13 21:09:40,272 | INFO     | did not find any defunct processes belonging to 573106
[2026-01-13 16:10:14] 2026-01-13 21:09:40,272 | INFO     | ready for new job
[2026-01-13 16:10:14] 2026-01-13 21:09:40,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 16:10:14] 2026-01-13 21:09:40,291 | INFO     | ***************************************
[2026-01-13 16:10:14] 2026-01-13 21:09:40,291 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 16:10:14] 2026-01-13 21:09:40,291 | INFO     | ***************************************
[2026-01-13 16:10:14] 2026-01-13 21:09:40,291 | INFO     | 
[2026-01-13 16:10:14] 2026-01-13 21:09:40,296 | INFO     | architecture information:
[2026-01-13 16:10:14] 2026-01-13 21:09:40,299 | INFO     | executing command: cat /etc/os-release
[2026-01-13 16:10:14] 2026-01-13 21:09:40,355 | INFO     | cat /etc/os-release:
[2026-01-13 16:10:14] NAME="CentOS Linux"
[2026-01-13 16:10:14] VERSION="7 (Core)"
[2026-01-13 16:10:14] ID="centos"
[2026-01-13 16:10:14] ID_LIKE="rhel fedora"
[2026-01-13 16:10:14] VERSION_ID="7"
[2026-01-13 16:10:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 16:10:14] ANSI_COLOR="0;31"
[2026-01-13 16:10:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 16:10:14] HOME_URL="https://www.centos.org/"
[2026-01-13 16:10:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 16:10:14] 
[2026-01-13 16:10:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 16:10:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 16:10:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 16:10:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 16:10:14] 
[2026-01-13 16:10:14] 2026-01-13 21:09:40,356 | INFO     | ***************************************
[2026-01-13 16:10:14] 2026-01-13 21:09:40,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | INFO     | sufficient remaining disk space (125579558912 B)
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | INFO     | update_server=False
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 16:10:14] 2026-01-13 21:09:40,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:10:14] 2026-01-13 21:09:40,925 | INFO     | aborting loop
[2026-01-13 16:10:14] 2026-01-13 21:09:41,614 | INFO     | all data control threads have been joined
[2026-01-13 16:10:14] 2026-01-13 21:09:41,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 16:10:14] 2026-01-13 21:09:41,779 | INFO     | all payload control threads have been joined
[2026-01-13 16:10:14] 2026-01-13 21:09:41,930 | INFO     | [job] retrieve thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:41,930 | INFO     | [job] job monitor thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 16:10:14] 2026-01-13 21:09:42,109 | INFO     | [payload] validate_post thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,183 | INFO     | all job control threads have been joined
[2026-01-13 16:10:14] 2026-01-13 21:09:42,275 | INFO     | [job] validate thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,409 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,474 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,529 | INFO     | [data] copytool_in thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,620 | INFO     | [data] control thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:42,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 16:10:14] 2026-01-13 21:09:42,784 | INFO     | [payload] control thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:43,183 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:43,202 | INFO     | [job] control thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:43,498 | INFO     | [payload] failed_post thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:43,769 | INFO     | [job] queue monitor thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:44,010 | INFO     | [data] copytool_out thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:45,681 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:09:51,874 | INFO     | job.realtimelogging is not enabled
[2026-01-13 16:10:14] 2026-01-13 21:09:52,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 16:10:14] 2026-01-13 21:10:06,698 | INFO     | [monitor] cgroup control has ended
[2026-01-13 16:10:14] 2026-01-13 21:10:08,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649878382400)>', '<ExcThread(monitor, started 139649511057152)>']
[2026-01-13 16:10:14] 2026-01-13 21:10:11,295 | INFO     | PID=562432 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 16:10:14] 2026-01-13 21:10:11,296 | INFO     | .. there are 23 such processes running
[2026-01-13 16:10:14] 2026-01-13 21:10:11,297 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 16:10:14] 2026-01-13 21:10:11,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 16:10:14] 2026-01-13 21:10:11,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 16:10:14] 2026-01-13 21:10:11,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 16:10:14] 2026-01-13 21:10:11,297 | INFO     | [monitor] control thread has ended
[2026-01-13 16:10:14] 2026-01-13 21:10:13,634 | INFO     | all workflow threads have been joined
[2026-01-13 16:10:14] 2026-01-13 21:10:13,634 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 16:10:14] 2026-01-13 21:10:13,639 | INFO     | traces error code: 0
[2026-01-13 16:10:14] 2026-01-13 21:10:13,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 16:10:14] 2026-01-13 21:10:13,862 [wrapper] ==== pilot stdout END ====
[2026-01-13 16:10:14] 2026-01-13 21:10:13,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 16:10:14] 2026-01-13 21:10:13,867 [wrapper] pilotpid: 562432
[2026-01-13 16:10:14] 2026-01-13 21:10:13,870 [wrapper] Pilot exit status: 0
[2026-01-13 16:10:14] 2026-01-13 21:10:13,884 [wrapper] pandaids: 6966862161
[2026-01-13 16:10:14] 2026-01-13 21:10:13,979 [wrapper] cleanup supervisor_pilot 3166585 562433
[2026-01-13 16:10:14] 2026-01-13 21:10:13,982 [wrapper] Test setup, not cleaning
[2026-01-13 16:10:14] 2026-01-13 21:10:13,985 [wrapper] apfmon messages muted
[2026-01-13 16:10:14] 2026-01-13 21:10:13,989 [wrapper] ==== wrapper stdout END ====
[2026-01-13 16:10:14] 2026-01-13 21:10:13,992 [wrapper] ==== wrapper stderr END ====
[2026-01-13 16:10:14]  *** Error codes and diagnostics ***
[2026-01-13 16:10:14]     "exeErrorCode": 0,
[2026-01-13 16:10:14]     "exeErrorDiag": "",
[2026-01-13 16:10:14]     "pilotErrorCode": 0,
[2026-01-13 16:10:14]     "pilotErrorDiag": "",
[2026-01-13 16:10:14]  *** Listing of results directory ***
[2026-01-13 16:10:14] total 1504404
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:58 queuedata.json
[2026-01-13 16:10:14] -rwx------. 1 boincer umatlas      36322 Jan 12 03:59 runpilot2-wrapper.sh
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 04:00 pilot3.tar.gz
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 16:10:14] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:11 run_atlas
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:11 job.xml
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas  321419414 Jan 12 04:11 EVNT.48118027._000269.pool.root.1
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:11 start_atlas.sh
[2026-01-13 16:10:14] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:11 shared
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas     592605 Jan 12 04:11 input.tar.gz
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:11 boinc_lockfile
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 04:11 pandaJob.out
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas         57 Jan 12 04:11 setup.sh.local
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas     987688 Jan 12 04:13 agis_schedconf.cvmfs.json
[2026-01-13 16:10:14] drwx------. 5 boincer umatlas       4096 Jan 12 04:13 pilot3
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas        534 Jan 13 16:01 boinc_task_state.xml
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas       6960 Jan 13 16:04 init_data.xml
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas 1176032635 Jan 13 16:08 HITS.48187943._001311.pool.root.1
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas       1077 Jan 13 16:09 memory_monitor_summary.json
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas    1516246 Jan 13 16:09 agis_ddmendpoints.agis.ALL.json
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas    3340104 Jan 13 16:09 log.48187943._001311.job.log.tgz.1
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas      27521 Jan 13 16:09 heartbeat.json
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas         95 Jan 13 16:10 pilot_heartbeat.json
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas       4896 Jan 13 16:10 pilotlog.txt
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas   16210244 Jan 13 16:10 log.48187943._001311.job.log.1
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas        353 Jan 13 16:10 output.list
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 16:10 boinc_mmap_file
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas        620 Jan 13 16:10 runtime_log
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas   19589120 Jan 13 16:10 result.tar.gz
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas         29 Jan 13 16:10 wrapper_checkpoint.txt
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas       9339 Jan 13 16:10 runtime_log.err
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas        670 Jan 13 16:10 Q1HLDmtwSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpqhKDmwyXXyn.diag
[2026-01-13 16:10:14] -rw-r--r--. 1 boincer umatlas      21669 Jan 13 16:10 stderr.txt
[2026-01-13 16:10:14] HITS file was successfully produced:
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas 1176032635 Jan 13 16:08 shared/HITS.pool.root.1
[2026-01-13 16:10:14]  *** Contents of shared directory: ***
[2026-01-13 16:10:14] total 1482092
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas  321419414 Jan 12 04:11 ATLAS.root_0
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:11 start_atlas.sh
[2026-01-13 16:10:14] -rw-r--r--. 2 boincer umatlas     592605 Jan 12 04:11 input.tar.gz
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas 1176032635 Jan 13 16:08 HITS.pool.root.1
[2026-01-13 16:10:14] -rw-------. 1 boincer umatlas   19589120 Jan 13 16:10 result.tar.gz
16:10:16 (557055): run_atlas exited; CPU time 231371.444525
16:10:16 (557055): called boinc_finish(0)

</stderr_txt>
]]>

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