Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:47 (751125): wrapper (7.7.26015): starting
05:06:47 (751125): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 05:06:47] Arguments: --nthreads 12
[2026-01-12 05:06:47] Threads: 12
[2026-01-12 05:06:47] Checking for CVMFS
[2026-01-12 05:06:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 05:06:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 05:06:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 05:06:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 05:06:48] 2.13.3.0 10119 25686 178676 155047 3 255 25509503 39288833 8909 16776704 0 11744762 99.539 16255074 41230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 05:06:48] CVMFS is ok
[2026-01-12 05:06:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 05:06:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 05:06:48] Further information can be found at the LHC@home message board.
[2026-01-12 05:06:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 05:06:48] Checking for apptainer binary...
[2026-01-12 05:06:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 05:06:48] Running /usr/bin/apptainer --version
[2026-01-12 05:06:48] apptainer version 1.4.5-2.el9
[2026-01-12 05:06:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 05:06:48] c-210-1.aglt2.org
[2026-01-12 05:06:48] apptainer works
[2026-01-12 05:06:48] Set ATHENA_PROC_NUMBER=12
[2026-01-12 05:06:48] Set ATHENA_CORE_NUMBER=12
[2026-01-12 05:06:48] Starting ATLAS job with PandaID=6966861103
[2026-01-12 05:06:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 19:09:17]  *** The last 200 lines of the pilot log: ***
[2026-01-13 19:09:17] 2026-01-14 00:08:12,985 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 19:09:17] 2026-01-14 00:08:12,998 | INFO     | executing command: lscpu
[2026-01-13 19:09:17] 2026-01-14 00:08:13,180 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 19:09:17] 2026-01-14 00:08:14,781 | INFO     | time since job start (136876s) is within the limit (349056.0s)
[2026-01-13 19:09:17] 2026-01-14 00:08:15,422 | INFO     | monitor loop #8308: job 0:6966861103 is in state 'finished'
[2026-01-13 19:09:17] 2026-01-14 00:08:15,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:09:17] 2026-01-14 00:08:16,788 | INFO     | time since job start (136878s) is within the limit (349056.0s)
[2026-01-13 19:09:17] 2026-01-14 00:08:17,938 | INFO     | monitor loop #8309: job 0:6966861103 is in state 'finished'
[2026-01-13 19:09:17] 2026-01-14 00:08:17,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:09:17] 2026-01-14 00:08:18,818 | INFO     | time since job start (136880s) is within the limit (349056.0s)
[2026-01-13 19:09:17] 2026-01-14 00:08:20,445 | INFO     | monitor loop #8310: job 0:6966861103 is in state 'finished'
[2026-01-13 19:09:17] 2026-01-14 00:08:20,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:09:17] 2026-01-14 00:08:20,824 | INFO     | time since job start (136882s) is within the limit (349056.0s)
[2026-01-13 19:09:17] 2026-01-14 00:08:22,836 | INFO     | time since job start (136884s) is within the limit (349056.0s)
[2026-01-13 19:09:17] 2026-01-14 00:08:22,951 | INFO     | monitor loop #8311: job 0:6966861103 is in state 'finished'
[2026-01-13 19:09:17] 2026-01-14 00:08:22,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 19:09:17] 2026-01-14 00:08:23,806 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 19:09:17] 2026-01-14 00:08:23,812 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.061425000001
[2026-01-13 19:09:17] 2026-01-14 00:08:23,819 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966861103/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 19:09:17] 2026-01-14 00:08:23,819 | INFO     | extracted standard info from prmon json
[2026-01-13 19:09:17] 2026-01-14 00:08:23,819 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 19:09:17] 2026-01-14 00:08:23,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 19:09:17] 2026-01-14 00:08:23,860 | INFO     | fitting pss+swap vs Time
[2026-01-13 19:09:17] 2026-01-14 00:08:23,864 | INFO     | sum of square deviations: 3503921200155.41
[2026-01-13 19:09:17] 2026-01-14 00:08:23,977 | INFO     | sum of deviations: 13766709134945.71
[2026-01-13 19:09:17] 2026-01-14 00:08:23,977 | INFO     | mean x: 1768280864.1167557
[2026-01-13 19:09:17] 2026-01-14 00:08:23,977 | INFO     | mean y: 4263168.161319073
[2026-01-13 19:09:17] 2026-01-14 00:08:23,978 | INFO     | intersect: -6943212797.93807
[2026-01-13 19:09:17] 2026-01-14 00:08:23,981 | INFO     | chi2: 15.364502918947744
[2026-01-13 19:09:17] 2026-01-14 00:08:23,984 | INFO     | sum of square deviations: 3480555657212.3184
[2026-01-13 19:09:17] 2026-01-14 00:08:24,149 | INFO     | sum of deviations: 15002575880085.197
[2026-01-13 19:09:17] 2026-01-14 00:08:24,149 | INFO     | mean x: 1768280711.6292987
[2026-01-13 19:09:17] 2026-01-14 00:08:24,150 | INFO     | mean y: 4271232.850826262
[2026-01-13 19:09:17] 2026-01-14 00:08:24,150 | INFO     | intersect: -7617720243.865649
[2026-01-13 19:09:17] 2026-01-14 00:08:24,157 | INFO     | chi2: 11.529280661091594
[2026-01-13 19:09:17] 2026-01-14 00:08:24,157 | INFO     | current chi2=11.529280661091594 (change=24.961577202256862 %)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,157 | INFO     | right removable region: 2238
[2026-01-13 19:09:17] 2026-01-14 00:08:24,164 | INFO     | sum of square deviations: 3480547968772.316
[2026-01-13 19:09:17] 2026-01-14 00:08:24,426 | INFO     | sum of deviations: 12619199818831.574
[2026-01-13 19:09:17] 2026-01-14 00:08:24,427 | INFO     | mean x: 1768281016.6292987
[2026-01-13 19:09:17] 2026-01-14 00:08:24,427 | INFO     | mean y: 4270653.9513175525
[2026-01-13 19:09:17] 2026-01-14 00:08:24,427 | INFO     | intersect: -6406872558.2373705
[2026-01-13 19:09:17] 2026-01-14 00:08:24,434 | INFO     | chi2: 12.29660490272896
[2026-01-13 19:09:17] 2026-01-14 00:08:24,435 | INFO     | current chi2=12.29660490272896 (change=19.967440745742607 %)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,435 | INFO     | left removable region: 10
[2026-01-13 19:09:17] 2026-01-14 00:08:24,442 | INFO     | sum of square deviations: 3429504927371.8228
[2026-01-13 19:09:17] 2026-01-14 00:08:24,646 | INFO     | sum of deviations: 13777902150215.008
[2026-01-13 19:09:17] 2026-01-14 00:08:24,646 | INFO     | mean x: 1768280986.1485636
[2026-01-13 19:09:17] 2026-01-14 00:08:24,646 | INFO     | mean y: 4282278.661579892
[2026-01-13 19:09:17] 2026-01-14 00:08:24,647 | INFO     | intersect: -7099717545.567038
[2026-01-13 19:09:17] 2026-01-14 00:08:24,649 | INFO     | chi2: 7.667666598616085
[2026-01-13 19:09:17] 2026-01-14 00:08:24,650 | INFO     | current memory leak: 4.02 B/s (using 2228 data points, chi2=7.67)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | could have reported an average CPU frequency of 2600 MHz (78 samples)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | ..............................
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . Timing measurements:
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . get job = 0 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . initial setup = 2 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . payload setup = 9 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . stage-in = 0 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,652 | INFO     | . payload execution = 136829 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,653 | INFO     | . stage-out = 11 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,653 | INFO     | . log creation = 3 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,653 | INFO     | ..............................
[2026-01-13 19:09:17] 2026-01-14 00:08:24,757 | INFO     | 
[2026-01-13 19:09:17] 2026-01-14 00:08:24,757 | INFO     | job summary report
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | --------------------------------------------------
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | PanDA job id: 6966861103
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | task id: 48187943
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | errors: (none)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | pilot state: finished 
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | transexitcode: 0
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | exeerrorcode: 0
[2026-01-13 19:09:17] 2026-01-14 00:08:24,758 | INFO     | exeerrordiag: 
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | exitcode: 0
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | exitmsg: OK
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | cpuconsumptiontime: 358021 s
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | nevents: 2050
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | neventsw: 0
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | pid: 762139
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | pgrp: 762139
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | corecount: 12
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | event service: False
[2026-01-13 19:09:17] 2026-01-14 00:08:24,759 | INFO     | sizes: {0: 2284623, 5: 2284885, 11: 2284941, 136843: 2393284, 136844: 2393283, 136856: 2402337, 136858: 2402521, 136872: 2402767}
[2026-01-13 19:09:17] 2026-01-14 00:08:24,760 | INFO     | --------------------------------------------------
[2026-01-13 19:09:17] 2026-01-14 00:08:24,760 | INFO     | 
[2026-01-13 19:09:17] 2026-01-14 00:08:24,760 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 19:09:17] 2026-01-14 00:08:24,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,783 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 19:09:17] 2026-01-14 00:08:24,784 | INFO     | job 6966861103 has completed (purged errors)
[2026-01-13 19:09:17] 2026-01-14 00:08:24,785 | INFO     | overall cleanup function is called
[2026-01-13 19:09:17] 2026-01-14 00:08:25,822 | INFO     | --- collectZombieJob: --- 10, [762139]
[2026-01-13 19:09:17] 2026-01-14 00:08:25,823 | INFO     | zombie collector waiting for pid 762139
[2026-01-13 19:09:17] 2026-01-14 00:08:25,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 19:09:17] 2026-01-14 00:08:25,823 | INFO     | collected zombie processes
[2026-01-13 19:09:17] 2026-01-14 00:08:25,823 | INFO     | will attempt to kill all subprocesses of pid=762139
[2026-01-13 19:09:17] 2026-01-14 00:08:26,817 | INFO     | process IDs to be killed: [762139] (in reverse order)
[2026-01-13 19:09:17] 2026-01-14 00:08:27,086 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 19:09:17] 2026-01-14 00:08:27,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 19:09:17] 2026-01-14 00:08:27,104 | INFO     | did not find any defunct processes belonging to 762139
[2026-01-13 19:09:17] 2026-01-14 00:08:27,121 | INFO     | did not find any defunct processes belonging to 762139
[2026-01-13 19:09:17] 2026-01-14 00:08:27,121 | INFO     | ready for new job
[2026-01-13 19:09:17] 2026-01-14 00:08:27,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 19:09:17] 2026-01-14 00:08:27,144 | INFO     | ***************************************
[2026-01-13 19:09:17] 2026-01-14 00:08:27,144 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 19:09:17] 2026-01-14 00:08:27,144 | INFO     | ***************************************
[2026-01-13 19:09:17] 2026-01-14 00:08:27,144 | INFO     | 
[2026-01-13 19:09:17] 2026-01-14 00:08:27,146 | INFO     | architecture information:
[2026-01-13 19:09:17] 2026-01-14 00:08:27,147 | INFO     | executing command: cat /etc/os-release
[2026-01-13 19:09:17] 2026-01-14 00:08:27,294 | INFO     | cat /etc/os-release:
[2026-01-13 19:09:17] NAME="CentOS Linux"
[2026-01-13 19:09:17] VERSION="7 (Core)"
[2026-01-13 19:09:17] ID="centos"
[2026-01-13 19:09:17] ID_LIKE="rhel fedora"
[2026-01-13 19:09:17] VERSION_ID="7"
[2026-01-13 19:09:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 19:09:17] ANSI_COLOR="0;31"
[2026-01-13 19:09:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 19:09:17] HOME_URL="https://www.centos.org/"
[2026-01-13 19:09:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 19:09:17] 
[2026-01-13 19:09:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 19:09:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 19:09:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 19:09:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 19:09:17] 
[2026-01-13 19:09:17] 2026-01-14 00:08:27,294 | INFO     | ***************************************
[2026-01-13 19:09:17] 2026-01-14 00:08:27,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 19:09:17] 2026-01-14 00:08:27,886 | INFO     | sufficient remaining disk space (50935627776 B)
[2026-01-13 19:09:17] 2026-01-14 00:08:27,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 19:09:17] 2026-01-14 00:08:27,886 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 19:09:17] 2026-01-14 00:08:27,887 | INFO     | update_server=False
[2026-01-13 19:09:17] 2026-01-14 00:08:27,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 19:09:17] 2026-01-14 00:08:27,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 19:09:17] 2026-01-14 00:08:27,991 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 19:09:17] 2026-01-14 00:08:27,992 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 19:09:17] 2026-01-14 00:08:27,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 19:09:17] 2026-01-14 00:08:27,992 | INFO     | will abort loop
[2026-01-13 19:09:17] 2026-01-14 00:08:28,279 | INFO     | all payload control threads have been joined
[2026-01-13 19:09:17] 2026-01-14 00:08:28,380 | INFO     | all job control threads have been joined
[2026-01-13 19:09:17] 2026-01-14 00:08:28,788 | INFO     | all data control threads have been joined
[2026-01-13 19:09:17] 2026-01-14 00:08:28,894 | INFO     | [job] retrieve thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:28,984 | INFO     | [payload] validate_post thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:28,999 | INFO     | [job] job monitor thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,025 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,025 | INFO     | [data] copytool_in thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,131 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,184 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,184 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,286 | INFO     | [payload] control thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,399 | INFO     | [job] control thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 19:09:17] 2026-01-14 00:08:29,796 | INFO     | [data] control thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:29,915 | INFO     | [data] copytool_out thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:30,085 | INFO     | [job] validate thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:30,316 | INFO     | [payload] failed_post thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:30,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 19:09:17] 2026-01-14 00:08:30,778 | INFO     | [job] queue monitor thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:34,643 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 19:09:17] 2026-01-14 00:08:56,479 | INFO     | PID=754787 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 19:09:17] 2026-01-14 00:08:56,479 | INFO     | .. there are 15 such processes running
[2026-01-13 19:09:17] 2026-01-14 00:08:56,480 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 19:09:17] 2026-01-14 00:08:56,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 19:09:17] 2026-01-14 00:08:56,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 19:09:17] 2026-01-14 00:09:09,840 | INFO     | [monitor] cgroup control has ended
[2026-01-13 19:09:17] 2026-01-14 00:09:10,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013576820544)>', '<ExcThread(monitor, started 140013207529216)>']
[2026-01-13 19:09:17] 2026-01-14 00:09:11,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 19:09:17] 2026-01-14 00:09:11,609 | INFO     | [monitor] control thread has ended
[2026-01-13 19:09:17] 2026-01-14 00:09:15,860 | INFO     | all workflow threads have been joined
[2026-01-13 19:09:17] 2026-01-14 00:09:15,861 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 19:09:17] 2026-01-14 00:09:15,861 | INFO     | traces error code: 0
[2026-01-13 19:09:17] 2026-01-14 00:09:15,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 19:09:17] 2026-01-14 00:09:16,130 [wrapper] ==== pilot stdout END ====
[2026-01-13 19:09:17] 2026-01-14 00:09:16,161 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 19:09:17] 2026-01-14 00:09:16,216 [wrapper] pilotpid: 754787
[2026-01-13 19:09:17] 2026-01-14 00:09:16,254 [wrapper] Pilot exit status: 0
[2026-01-13 19:09:17] 2026-01-14 00:09:16,362 [wrapper] pandaids: 6966861103
[2026-01-13 19:09:17] 2026-01-14 00:09:16,415 [wrapper] cleanup supervisor_pilot  577069 754788
[2026-01-13 19:09:17] 2026-01-14 00:09:16,426 [wrapper] Test setup, not cleaning
[2026-01-13 19:09:17] 2026-01-14 00:09:16,429 [wrapper] apfmon messages muted
[2026-01-13 19:09:17] 2026-01-14 00:09:16,442 [wrapper] ==== wrapper stdout END ====
[2026-01-13 19:09:17] 2026-01-14 00:09:16,457 [wrapper] ==== wrapper stderr END ====
[2026-01-13 19:09:17]  *** Error codes and diagnostics ***
[2026-01-13 19:09:17]     "exeErrorCode": 0,
[2026-01-13 19:09:17]     "exeErrorDiag": "",
[2026-01-13 19:09:17]     "pilotErrorCode": 0,
[2026-01-13 19:09:17]     "pilotErrorDiag": "",
[2026-01-13 19:09:17]  *** Listing of results directory ***
[2026-01-13 19:09:17] total 1513872
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:56 queuedata.json
[2026-01-13 19:09:17] -rwx------. 1 boincer umatlas      36322 Jan 12 03:57 runpilot2-wrapper.sh
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas        100 Jan 12 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 19:09:17] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 05:06 run_atlas
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas        105 Jan 12 05:06 job.xml
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas  319338091 Jan 12 05:06 EVNT.48118027._000218.pool.root.1
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 05:06 start_atlas.sh
[2026-01-13 19:09:17] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 05:06 shared
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas     592616 Jan 12 05:06 input.tar.gz
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas          0 Jan 12 05:06 boinc_lockfile
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 05:06 pandaJob.out
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas         57 Jan 12 05:06 setup.sh.local
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas     987688 Jan 12 05:06 agis_schedconf.cvmfs.json
[2026-01-13 19:09:17] drwx------. 5 boincer umatlas       4096 Jan 12 05:06 pilot3
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas        534 Jan 13 18:43 boinc_task_state.xml
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas       6661 Jan 13 19:01 init_data.xml
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas 1184619353 Jan 13 19:06 HITS.48187943._001061.pool.root.1
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas       1065 Jan 13 19:07 memory_monitor_summary.json
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas    1516246 Jan 13 19:08 agis_ddmendpoints.agis.ALL.json
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas    3840786 Jan 13 19:08 log.48187943._001061.job.log.tgz.1
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas         95 Jan 13 19:08 pilot_heartbeat.json
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas      28104 Jan 13 19:08 heartbeat.json
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas         30 Jan 13 19:09 wrapper_checkpoint.txt
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 19:09 boinc_mmap_file
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas       5009 Jan 13 19:09 pilotlog.txt
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas   17304466 Jan 13 19:09 log.48187943._001061.job.log.1
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas        353 Jan 13 19:09 output.list
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas        620 Jan 13 19:09 runtime_log
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas   21186560 Jan 13 19:09 result.tar.gz
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas       9341 Jan 13 19:09 runtime_log.err
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas        667 Jan 13 19:09 3L5KDmwuSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkJnKDmeCzYzn.diag
[2026-01-13 19:09:17] -rw-r--r--. 1 boincer umatlas      21699 Jan 13 19:09 stderr.txt
[2026-01-13 19:09:17] HITS file was successfully produced:
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas 1184619353 Jan 13 19:06 shared/HITS.pool.root.1
[2026-01-13 19:09:17]  *** Contents of shared directory: ***
[2026-01-13 19:09:17] total 1490004
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas  319338091 Jan 12 05:06 ATLAS.root_0
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 05:06 start_atlas.sh
[2026-01-13 19:09:17] -rw-r--r--. 2 boincer umatlas     592616 Jan 12 05:06 input.tar.gz
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas 1184619353 Jan 13 19:06 HITS.pool.root.1
[2026-01-13 19:09:17] -rw-------. 1 boincer umatlas   21186560 Jan 13 19:09 result.tar.gz
19:09:18 (751125): run_atlas exited; CPU time 358336.405311
19:09:18 (751125): called boinc_finish(0)

</stderr_txt>
]]>

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