Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:01:36 (3245265): wrapper (7.7.26015): starting
04:01:36 (3245265): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 04:01:36] Arguments: --nthreads 9
[2026-01-12 04:01:36] Threads: 9
[2026-01-12 04:01:36] Checking for CVMFS
[2026-01-12 04:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:01:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:01:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:01:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:01:36] 2.13.3.0 6683 18102 170788 155045 2 124 39583673 40960001 18093 16776704 0 23460954 99.766 17015432 39973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 04:01:36] CVMFS is ok
[2026-01-12 04:01:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:01:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:01:36] Further information can be found at the LHC@home message board.
[2026-01-12 04:01:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:01:36] Checking for apptainer binary...
[2026-01-12 04:01:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:01:36] Running /usr/bin/apptainer --version
[2026-01-12 04:01:36] apptainer version 1.4.5-2.el9
[2026-01-12 04:01:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:01:36] c-211-35-3.aglt2.org
[2026-01-12 04:01:36] apptainer works
[2026-01-12 04:01:36] Set ATHENA_PROC_NUMBER=9
[2026-01-12 04:01:36] Set ATHENA_CORE_NUMBER=9
[2026-01-12 04:01:36] Starting ATLAS job with PandaID=6966861080
[2026-01-12 04:01:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 05:09:35]  *** The last 200 lines of the pilot log: ***
[2026-01-13 05:09:35] 2026-01-13 10:08:50,709 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 05:09:35] 2026-01-13 10:08:50,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 05:09:35] 2026-01-13 10:08:50,733 | INFO     | fitting pss+swap vs Time
[2026-01-13 05:09:35] 2026-01-13 10:08:50,735 | INFO     | sum of square deviations: 1009331630462.1825
[2026-01-13 05:09:35] 2026-01-13 10:08:50,789 | INFO     | sum of deviations: 6525309315784.9375
[2026-01-13 05:09:35] 2026-01-13 10:08:50,789 | INFO     | mean x: 1768253712.8873146
[2026-01-13 05:09:35] 2026-01-13 10:08:50,790 | INFO     | mean y: 3588833.8798920377
[2026-01-13 05:09:35] 2026-01-13 10:08:50,790 | INFO     | intersect: -11428136950.926191
[2026-01-13 05:09:35] 2026-01-13 10:08:50,792 | INFO     | chi2: 7.165565449794547
[2026-01-13 05:09:35] 2026-01-13 10:08:50,794 | INFO     | sum of square deviations: 999152841984.0721
[2026-01-13 05:09:35] 2026-01-13 10:08:50,836 | INFO     | sum of deviations: 7155851324361.691
[2026-01-13 05:09:35] 2026-01-13 10:08:50,836 | INFO     | mean x: 1768253560.405552
[2026-01-13 05:09:35] 2026-01-13 10:08:50,836 | INFO     | mean y: 3598280.4529451593
[2026-01-13 05:09:35] 2026-01-13 10:08:50,836 | INFO     | intersect: -12660489785.30172
[2026-01-13 05:09:35] 2026-01-13 10:08:50,838 | INFO     | chi2: 3.938460625836948
[2026-01-13 05:09:35] 2026-01-13 10:08:50,838 | INFO     | current chi2=3.938460625836948 (change=45.03628983041565 %)
[2026-01-13 05:09:35] 2026-01-13 10:08:50,840 | INFO     | sum of square deviations: 989042662624.3265
[2026-01-13 05:09:35] 2026-01-13 10:08:50,882 | INFO     | sum of deviations: 7452792977011.877
[2026-01-13 05:09:35] 2026-01-13 10:08:50,882 | INFO     | mean x: 1768253407.9232337
[2026-01-13 05:09:35] 2026-01-13 10:08:50,882 | INFO     | mean y: 3602753.5475543477
[2026-01-13 05:09:35] 2026-01-13 10:08:50,882 | INFO     | intersect: -13320824066.605934
[2026-01-13 05:09:35] 2026-01-13 10:08:50,884 | INFO     | chi2: 2.7973842386585615
[2026-01-13 05:09:35] 2026-01-13 10:08:50,884 | INFO     | current chi2=2.7973842386585615 (change=28.972649356775037 %)
[2026-01-13 05:09:35] 2026-01-13 10:08:50,886 | INFO     | sum of square deviations: 979000231150.6627
[2026-01-13 05:09:35] 2026-01-13 10:08:50,928 | INFO     | sum of deviations: 7375746137484.519
[2026-01-13 05:09:35] 2026-01-13 10:08:50,928 | INFO     | mean x: 1768253255.4355829
[2026-01-13 05:09:35] 2026-01-13 10:08:50,928 | INFO     | mean y: 3601583.656441718
[2026-01-13 05:09:35] 2026-01-13 10:08:50,928 | INFO     | intersect: -13318343298.363003
[2026-01-13 05:09:35] 2026-01-13 10:08:50,930 | INFO     | chi2: 2.7973511021764166
[2026-01-13 05:09:35] 2026-01-13 10:08:50,930 | INFO     | current chi2=2.7973511021764166 (change=0.0011845524003080388 %)
[2026-01-13 05:09:35] 2026-01-13 10:08:50,930 | INFO     | right removable region: 1466
[2026-01-13 05:09:35] 2026-01-13 10:08:50,932 | INFO     | sum of square deviations: 999148061911.8854
[2026-01-13 05:09:35] 2026-01-13 10:08:50,975 | INFO     | sum of deviations: 6002767763574.749
[2026-01-13 05:09:35] 2026-01-13 10:08:50,975 | INFO     | mean x: 1768253865.4048748
[2026-01-13 05:09:35] 2026-01-13 10:08:50,975 | INFO     | mean y: 3596653.257955315
[2026-01-13 05:09:35] 2026-01-13 10:08:50,975 | INFO     | intersect: -10619871184.689878
[2026-01-13 05:09:35] 2026-01-13 10:08:50,977 | INFO     | chi2: 4.790562267472264
[2026-01-13 05:09:35] 2026-01-13 10:08:50,977 | INFO     | current chi2=4.790562267472264 (change=33.14467223783964 %)
[2026-01-13 05:09:35] 2026-01-13 10:08:50,979 | INFO     | sum of square deviations: 989035085308.6198
[2026-01-13 05:09:35] 2026-01-13 10:08:51,021 | INFO     | sum of deviations: 5858163438144.522
[2026-01-13 05:09:35] 2026-01-13 10:08:51,021 | INFO     | mean x: 1768254017.908288
[2026-01-13 05:09:35] 2026-01-13 10:08:51,022 | INFO     | mean y: 3598833.7595108696
[2026-01-13 05:09:35] 2026-01-13 10:08:51,022 | INFO     | intersect: -10469963925.47277
[2026-01-13 05:09:35] 2026-01-13 10:08:51,023 | INFO     | chi2: 4.73456939371431
[2026-01-13 05:09:35] 2026-01-13 10:08:51,024 | INFO     | current chi2=4.73456939371431 (change=1.1688163232559188 %)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,024 | INFO     | left removable region: 20
[2026-01-13 05:09:35] 2026-01-13 10:08:51,025 | INFO     | sum of square deviations: 937554683035.509
[2026-01-13 05:09:35] 2026-01-13 10:08:51,066 | INFO     | sum of deviations: 6438498080953.149
[2026-01-13 05:09:35] 2026-01-13 10:08:51,066 | INFO     | mean x: 1768253834.958506
[2026-01-13 05:09:35] 2026-01-13 10:08:51,066 | INFO     | mean y: 3615544.9356846474
[2026-01-13 05:09:35] 2026-01-13 10:08:51,066 | INFO     | intersect: -12139568345.051023
[2026-01-13 05:09:35] 2026-01-13 10:08:51,068 | INFO     | chi2: 0.2796091483410911
[2026-01-13 05:09:35] 2026-01-13 10:08:51,068 | INFO     | current memory leak: 6.87 B/s (using 1446 data points, chi2=0.28)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | could have reported an average CPU frequency of 2706 MHz (53 samples)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | ..............................
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . Timing measurements:
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . get job = 0 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . initial setup = 2 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . payload setup = 9 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . stage-in = 0 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . payload execution = 90381 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,070 | INFO     | . stage-out = 4 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,071 | INFO     | . log creation = 1 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,071 | INFO     | ..............................
[2026-01-13 05:09:35] 2026-01-13 10:08:51,419 | INFO     | 
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | job summary report
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | --------------------------------------------------
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | PanDA job id: 6966861080
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | task id: 48187943
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | errors: (none)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | pilot state: finished 
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | transexitcode: 0
[2026-01-13 05:09:35] 2026-01-13 10:08:51,433 | INFO     | exeerrorcode: 0
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | exeerrordiag: 
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | exitcode: 0
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | exitmsg: OK
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | cpuconsumptiontime: 307251 s
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | nevents: 2050
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | neventsw: 0
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | pid: 3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | pgrp: 3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | corecount: 9
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | event service: False
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | sizes: {0: 2283795, 1: 2284651, 5: 2284913, 12: 2284969, 90395: 2370093, 90396: 2370092, 90400: 2379330, 90408: 2379616}
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | --------------------------------------------------
[2026-01-13 05:09:35] 2026-01-13 10:08:51,434 | INFO     | 
[2026-01-13 05:09:35] 2026-01-13 10:08:51,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 05:09:35] 2026-01-13 10:08:51,707 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | job 6966861080 has completed (purged errors)
[2026-01-13 05:09:35] 2026-01-13 10:08:51,709 | INFO     | overall cleanup function is called
[2026-01-13 05:09:35] 2026-01-13 10:08:52,727 | INFO     | --- collectZombieJob: --- 10, [3256223]
[2026-01-13 05:09:35] 2026-01-13 10:08:52,728 | INFO     | zombie collector waiting for pid 3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:52,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 05:09:35] 2026-01-13 10:08:52,728 | INFO     | collected zombie processes
[2026-01-13 05:09:35] 2026-01-13 10:08:52,728 | INFO     | will attempt to kill all subprocesses of pid=3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:53,220 | INFO     | process IDs to be killed: [3256223] (in reverse order)
[2026-01-13 05:09:35] 2026-01-13 10:08:53,341 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 05:09:35] 2026-01-13 10:08:53,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 05:09:35] 2026-01-13 10:08:53,355 | INFO     | did not find any defunct processes belonging to 3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:53,369 | INFO     | did not find any defunct processes belonging to 3256223
[2026-01-13 05:09:35] 2026-01-13 10:08:53,369 | INFO     | ready for new job
[2026-01-13 05:09:35] 2026-01-13 10:08:53,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 05:09:35] 2026-01-13 10:08:53,376 | INFO     | ***************************************
[2026-01-13 05:09:35] 2026-01-13 10:08:53,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 05:09:35] 2026-01-13 10:08:53,376 | INFO     | ***************************************
[2026-01-13 05:09:35] 2026-01-13 10:08:53,376 | INFO     | 
[2026-01-13 05:09:35] 2026-01-13 10:08:53,382 | INFO     | architecture information:
[2026-01-13 05:09:35] 2026-01-13 10:08:53,383 | INFO     | executing command: cat /etc/os-release
[2026-01-13 05:09:35] 2026-01-13 10:08:53,406 | INFO     | cat /etc/os-release:
[2026-01-13 05:09:35] NAME="CentOS Linux"
[2026-01-13 05:09:35] VERSION="7 (Core)"
[2026-01-13 05:09:35] ID="centos"
[2026-01-13 05:09:35] ID_LIKE="rhel fedora"
[2026-01-13 05:09:35] VERSION_ID="7"
[2026-01-13 05:09:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 05:09:35] ANSI_COLOR="0;31"
[2026-01-13 05:09:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 05:09:35] HOME_URL="https://www.centos.org/"
[2026-01-13 05:09:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 05:09:35] 
[2026-01-13 05:09:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 05:09:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 05:09:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 05:09:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 05:09:35] 
[2026-01-13 05:09:35] 2026-01-13 10:08:53,407 | INFO     | ***************************************
[2026-01-13 05:09:35] 2026-01-13 10:08:53,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 05:09:35] 2026-01-13 10:08:53,934 | INFO     | sufficient remaining disk space (123054587904 B)
[2026-01-13 05:09:35] 2026-01-13 10:08:53,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 05:09:35] 2026-01-13 10:08:53,935 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 05:09:35] 2026-01-13 10:08:53,935 | INFO     | update_server=False
[2026-01-13 05:09:35] 2026-01-13 10:08:53,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 05:09:35] 2026-01-13 10:08:53,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 05:09:35] 2026-01-13 10:08:53,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 05:09:35] 2026-01-13 10:08:54,555 | INFO     | all payload control threads have been joined
[2026-01-13 05:09:35] 2026-01-13 10:08:54,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:09:35] 2026-01-13 10:08:54,661 | INFO     | aborting loop
[2026-01-13 05:09:35] 2026-01-13 10:08:54,767 | INFO     | all data control threads have been joined
[2026-01-13 05:09:35] 2026-01-13 10:08:54,940 | INFO     | [job] retrieve thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,278 | INFO     | all job control threads have been joined
[2026-01-13 05:09:35] 2026-01-13 10:08:55,402 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,418 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,562 | INFO     | [payload] control thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,583 | INFO     | [payload] failed_post thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,599 | INFO     | [payload] validate_post thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,651 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,667 | INFO     | [job] job monitor thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,775 | INFO     | [data] control thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:55,941 | INFO     | [data] copytool_out thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:56,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:09:35] 2026-01-13 10:08:56,284 | INFO     | [job] control thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:56,333 | INFO     | [job] validate thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:56,364 | INFO     | [data] copytool_in thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:57,192 | INFO     | [job] queue monitor thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:08:57,947 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:09:04,012 | INFO     | job.realtimelogging is not enabled
[2026-01-13 05:09:35] 2026-01-13 10:09:05,018 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 05:09:35] 2026-01-13 10:09:23,812 | INFO     | PID=3249109 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 05:09:35] 2026-01-13 10:09:23,812 | INFO     | .. there are 17 such processes running
[2026-01-13 05:09:35] 2026-01-13 10:09:23,813 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 05:09:35] 2026-01-13 10:09:23,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 05:09:35] 2026-01-13 10:09:23,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 05:09:35] 2026-01-13 10:09:29,946 | INFO     | [monitor] cgroup control has ended
[2026-01-13 05:09:35] 2026-01-13 10:09:29,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007847507776)>', '<ExcThread(monitor, started 140007411021568)>']
[2026-01-13 05:09:35] 2026-01-13 10:09:30,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 05:09:35] 2026-01-13 10:09:30,855 | INFO     | [monitor] control thread has ended
[2026-01-13 05:09:35] 2026-01-13 10:09:34,977 | INFO     | all workflow threads have been joined
[2026-01-13 05:09:35] 2026-01-13 10:09:34,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 05:09:35] 2026-01-13 10:09:34,982 | INFO     | traces error code: 0
[2026-01-13 05:09:35] 2026-01-13 10:09:34,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 05:09:35] 2026-01-13 10:09:35,164 [wrapper] ==== pilot stdout END ====
[2026-01-13 05:09:35] 2026-01-13 10:09:35,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 05:09:35] 2026-01-13 10:09:35,173 [wrapper] pilotpid: 3249109
[2026-01-13 05:09:35] 2026-01-13 10:09:35,178 [wrapper] Pilot exit status: 0
[2026-01-13 05:09:35] 2026-01-13 10:09:35,196 [wrapper] pandaids: 6966861080
[2026-01-13 05:09:35] 2026-01-13 10:09:35,280 [wrapper] cleanup supervisor_pilot 2085350 3249110
[2026-01-13 05:09:35] 2026-01-13 10:09:35,282 [wrapper] Test setup, not cleaning
[2026-01-13 05:09:35] 2026-01-13 10:09:35,312 [wrapper] apfmon messages muted
[2026-01-13 05:09:35] 2026-01-13 10:09:35,323 [wrapper] ==== wrapper stdout END ====
[2026-01-13 05:09:35] 2026-01-13 10:09:35,328 [wrapper] ==== wrapper stderr END ====
[2026-01-13 05:09:35]  *** Error codes and diagnostics ***
[2026-01-13 05:09:35]     "exeErrorCode": 0,
[2026-01-13 05:09:35]     "exeErrorDiag": "",
[2026-01-13 05:09:35]     "pilotErrorCode": 0,
[2026-01-13 05:09:35]     "pilotErrorDiag": "",
[2026-01-13 05:09:35]  *** Listing of results directory ***
[2026-01-13 05:09:35] total 1484444
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 05:09:35] -rwx------. 1 boincer umatlas      36322 Jan 12 03:56 runpilot2-wrapper.sh
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:56 queuedata.json
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 05:09:35] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:01 run_atlas
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:01 job.xml
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas  318807106 Jan 12 04:01 EVNT.48118027._000214.pool.root.1
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:01 start_atlas.sh
[2026-01-13 05:09:35] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:01 shared
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas     592603 Jan 12 04:01 input.tar.gz
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:01 boinc_lockfile
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas       2897 Jan 12 04:01 pandaJob.out
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas         57 Jan 12 04:01 setup.sh.local
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas     987688 Jan 12 04:01 agis_schedconf.cvmfs.json
[2026-01-13 05:09:35] drwx------. 5 boincer umatlas       4096 Jan 12 04:01 pilot3
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas        533 Jan 13 04:58 boinc_task_state.xml
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas       6860 Jan 13 05:02 init_data.xml
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas 1168792367 Jan 13 05:08 HITS.48187943._001042.pool.root.1
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas       1056 Jan 13 05:08 memory_monitor_summary.json
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas    1516240 Jan 13 05:08 agis_ddmendpoints.agis.ALL.json
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas    2937557 Jan 13 05:08 log.48187943._001042.job.log.tgz.1
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas      27930 Jan 13 05:08 heartbeat.json
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas         95 Jan 13 05:09 pilot_heartbeat.json
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 05:09 boinc_mmap_file
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas         29 Jan 13 05:09 wrapper_checkpoint.txt
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas       4898 Jan 13 05:09 pilotlog.txt
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas   11317600 Jan 13 05:09 log.48187943._001042.job.log.1
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas        353 Jan 13 05:09 output.list
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas        620 Jan 13 05:09 runtime_log
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas   14295040 Jan 13 05:09 result.tar.gz
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas       9353 Jan 13 05:09 runtime_log.err
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas        662 Jan 13 05:09 6piNDmxtSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSJnKDmUnRr9m.diag
[2026-01-13 05:09:35] -rw-r--r--. 1 boincer umatlas      21004 Jan 13 05:09 stderr.txt
[2026-01-13 05:09:35] HITS file was successfully produced:
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas 1168792367 Jan 13 05:08 shared/HITS.pool.root.1
[2026-01-13 05:09:35]  *** Contents of shared directory: ***
[2026-01-13 05:09:35] total 1467300
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas  318807106 Jan 12 04:01 ATLAS.root_0
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:01 start_atlas.sh
[2026-01-13 05:09:35] -rw-r--r--. 2 boincer umatlas     592603 Jan 12 04:01 input.tar.gz
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas 1168792367 Jan 13 05:08 HITS.pool.root.1
[2026-01-13 05:09:35] -rw-------. 1 boincer umatlas   14295040 Jan 13 05:09 result.tar.gz
05:09:37 (3245265): run_atlas exited; CPU time 309216.626812
05:09:37 (3245265): called boinc_finish(0)

</stderr_txt>
]]>

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