Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:02:35 (3368312): wrapper (7.7.26015): starting
04:02:35 (3368312): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 04:02:35] Arguments: --nthreads 9
[2026-01-12 04:02:35] Threads: 9
[2026-01-12 04:02:35] Checking for CVMFS
[2026-01-12 04:02:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:02:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:02:36] 2.13.3.0 11836 96045 399712 155045 3 384 30531076 32935937 21512 16776704 0 354175687 99.489 457787403 34399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:02:36] CVMFS is ok
[2026-01-12 04:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:02:36] Further information can be found at the LHC@home message board.
[2026-01-12 04:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:02:36] Checking for apptainer binary...
[2026-01-12 04:02:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:02:36] Running /usr/bin/apptainer --version
[2026-01-12 04:02:36] apptainer version 1.4.5-2.el9
[2026-01-12 04:02:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:02:36] c6-2-11-1.aglt2.org
[2026-01-12 04:02:36] apptainer works
[2026-01-12 04:02:36] Set ATHENA_PROC_NUMBER=9
[2026-01-12 04:02:36] Set ATHENA_CORE_NUMBER=9
[2026-01-12 04:02:36] Starting ATLAS job with PandaID=6966861008
[2026-01-12 04:02:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 10:00:41]  *** The last 200 lines of the pilot log: ***
[2026-01-13 10:00:41] 2026-01-13 15:00:08,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 10:00:41] 2026-01-13 15:00:08,210 | INFO     | fitting pss+swap vs Time
[2026-01-13 10:00:41] 2026-01-13 15:00:08,212 | INFO     | sum of square deviations: 1708092419252.2502
[2026-01-13 10:00:41] 2026-01-13 15:00:08,271 | INFO     | sum of deviations: 10179696976142.906
[2026-01-13 10:00:41] 2026-01-13 15:00:08,271 | INFO     | mean x: 1768262522.5266137
[2026-01-13 10:00:41] 2026-01-13 15:00:08,271 | INFO     | mean y: 3656726.459229898
[2026-01-13 10:00:41] 2026-01-13 15:00:08,272 | INFO     | intersect: -10534635259.796995
[2026-01-13 10:00:41] 2026-01-13 15:00:08,275 | INFO     | chi2: 10.721811633268082
[2026-01-13 10:00:41] 2026-01-13 15:00:08,279 | INFO     | sum of square deviations: 1693630046093.0542
[2026-01-13 10:00:41] 2026-01-13 15:00:08,340 | INFO     | sum of deviations: 10966008249266.861
[2026-01-13 10:00:41] 2026-01-13 15:00:08,340 | INFO     | mean x: 1768262370.040886
[2026-01-13 10:00:41] 2026-01-13 15:00:08,340 | INFO     | mean y: 3665017.6405451447
[2026-01-13 10:00:41] 2026-01-13 15:00:08,340 | INFO     | intersect: -11445576675.649021
[2026-01-13 10:00:41] 2026-01-13 15:00:08,343 | INFO     | chi2: 7.318764965849701
[2026-01-13 10:00:41] 2026-01-13 15:00:08,343 | INFO     | current chi2=7.318764965849701 (change=31.73947448264495 %)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,345 | INFO     | sum of square deviations: 1679249474277.7515
[2026-01-13 10:00:41] 2026-01-13 15:00:08,400 | INFO     | monitor loop #5982: job 0:6966861008 is in state 'finished'
[2026-01-13 10:00:41] 2026-01-13 15:00:08,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,417 | INFO     | sum of deviations: 11596653278202.76
[2026-01-13 10:00:41] 2026-01-13 15:00:08,417 | INFO     | mean x: 1768262217.5546696
[2026-01-13 10:00:41] 2026-01-13 15:00:08,417 | INFO     | mean y: 3671701.5597949885
[2026-01-13 10:00:41] 2026-01-13 15:00:08,417 | INFO     | intersect: -12207690669.565603
[2026-01-13 10:00:41] 2026-01-13 15:00:08,420 | INFO     | chi2: 4.819179567749138
[2026-01-13 10:00:41] 2026-01-13 15:00:08,420 | INFO     | current chi2=4.819179567749138 (change=34.15310383328267 %)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,422 | INFO     | sum of square deviations: 1664949400934.213
[2026-01-13 10:00:41] 2026-01-13 15:00:08,483 | INFO     | sum of deviations: 11583883948793.76
[2026-01-13 10:00:41] 2026-01-13 15:00:08,483 | INFO     | mean x: 1768262065.0622501
[2026-01-13 10:00:41] 2026-01-13 15:00:08,484 | INFO     | mean y: 3671564.112507139
[2026-01-13 10:00:41] 2026-01-13 15:00:08,484 | INFO     | intersect: -12299010151.765575
[2026-01-13 10:00:41] 2026-01-13 15:00:08,486 | INFO     | chi2: 4.7524218636881805
[2026-01-13 10:00:41] 2026-01-13 15:00:08,486 | INFO     | current chi2=4.7524218636881805 (change=1.3852503963062974 %)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,486 | INFO     | right removable region: 1750
[2026-01-13 10:00:41] 2026-01-13 15:00:08,489 | INFO     | sum of square deviations: 1693624631123.0527
[2026-01-13 10:00:41] 2026-01-13 15:00:08,549 | INFO     | sum of deviations: 9342506942582.436
[2026-01-13 10:00:41] 2026-01-13 15:00:08,549 | INFO     | mean x: 1768262675.040886
[2026-01-13 10:00:41] 2026-01-13 15:00:08,550 | INFO     | mean y: 3665550.591141397
[2026-01-13 10:00:41] 2026-01-13 15:00:08,550 | INFO     | intersect: -9750565708.388807
[2026-01-13 10:00:41] 2026-01-13 15:00:08,552 | INFO     | chi2: 7.203085724713888
[2026-01-13 10:00:41] 2026-01-13 15:00:08,552 | INFO     | current chi2=7.203085724713888 (change=32.81838954935699 %)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,554 | INFO     | sum of square deviations: 1679238965999.8591
[2026-01-13 10:00:41] 2026-01-13 15:00:08,619 | INFO     | sum of deviations: 8928137672141.107
[2026-01-13 10:00:41] 2026-01-13 15:00:08,619 | INFO     | mean x: 1768262827.5541003
[2026-01-13 10:00:41] 2026-01-13 15:00:08,619 | INFO     | mean y: 3669941.0410022778
[2026-01-13 10:00:41] 2026-01-13 15:00:08,619 | INFO     | intersect: -9397787674.333223
[2026-01-13 10:00:41] 2026-01-13 15:00:08,622 | INFO     | chi2: 6.368174502996314
[2026-01-13 10:00:41] 2026-01-13 15:00:08,622 | INFO     | current chi2=6.368174502996314 (change=11.591021593051183 %)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,622 | INFO     | left removable region: 20
[2026-01-13 10:00:41] 2026-01-13 15:00:08,624 | INFO     | sum of square deviations: 1605760877378.9678
[2026-01-13 10:00:41] 2026-01-13 15:00:08,684 | INFO     | sum of deviations: 9937546197449.355
[2026-01-13 10:00:41] 2026-01-13 15:00:08,684 | INFO     | mean x: 1768262644.6115606
[2026-01-13 10:00:41] 2026-01-13 15:00:08,684 | INFO     | mean y: 3689010.0913294796
[2026-01-13 10:00:41] 2026-01-13 15:00:08,684 | INFO     | intersect: -10939529228.438608
[2026-01-13 10:00:41] 2026-01-13 15:00:08,686 | INFO     | chi2: 0.21638831601666314
[2026-01-13 10:00:41] 2026-01-13 15:00:08,687 | INFO     | current memory leak: 6.19 B/s (using 1730 data points, chi2=0.22)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | could have reported an average CPU frequency of 2690 MHz (62 samples)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | ..............................
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . Timing measurements:
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . get job = 0 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . initial setup = 4 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . payload setup = 32 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . stage-in = 0 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . payload execution = 107722 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . stage-out = 4 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,689 | INFO     | . log creation = 1 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,690 | INFO     | ..............................
[2026-01-13 10:00:41] 2026-01-13 15:00:08,809 | INFO     | 
[2026-01-13 10:00:41] 2026-01-13 15:00:08,810 | INFO     | job summary report
[2026-01-13 10:00:41] 2026-01-13 15:00:08,810 | INFO     | --------------------------------------------------
[2026-01-13 10:00:41] 2026-01-13 15:00:08,810 | INFO     | PanDA job id: 6966861008
[2026-01-13 10:00:41] 2026-01-13 15:00:08,810 | INFO     | task id: 48187943
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | errors: (none)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | pilot state: finished 
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | transexitcode: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | exeerrorcode: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | exeerrordiag: 
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | exitcode: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | exitmsg: OK
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | cpuconsumptiontime: 307922 s
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | nevents: 2050
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | neventsw: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | pid: 3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | pgrp: 3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:08,811 | INFO     | corecount: 9
[2026-01-13 10:00:41] 2026-01-13 15:00:08,812 | INFO     | event service: False
[2026-01-13 10:00:41] 2026-01-13 15:00:08,812 | INFO     | sizes: {0: 2284394, 1: 2284649, 2: 2284677, 12: 2284677, 16: 2284967, 23: 2284995, 107757: 2378401, 107758: 2378400, 107762: 2387454, 107763: 2387510, 107771: 2387
[2026-01-13 10:00:41] 2026-01-13 15:00:08,812 | INFO     | --------------------------------------------------
[2026-01-13 10:00:41] 2026-01-13 15:00:08,812 | INFO     | 
[2026-01-13 10:00:41] 2026-01-13 15:00:08,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 10:00:41] 2026-01-13 15:00:08,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 10:00:41] 2026-01-13 15:00:08,839 | INFO     | job 6966861008 has completed (purged errors)
[2026-01-13 10:00:41] 2026-01-13 15:00:08,840 | INFO     | overall cleanup function is called
[2026-01-13 10:00:41] 2026-01-13 15:00:09,858 | INFO     | --- collectZombieJob: --- 10, [3407193]
[2026-01-13 10:00:41] 2026-01-13 15:00:09,858 | INFO     | zombie collector waiting for pid 3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:09,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 10:00:41] 2026-01-13 15:00:09,858 | INFO     | collected zombie processes
[2026-01-13 10:00:41] 2026-01-13 15:00:09,858 | INFO     | will attempt to kill all subprocesses of pid=3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:10,487 | INFO     | process IDs to be killed: [3407193] (in reverse order)
[2026-01-13 10:00:41] 2026-01-13 15:00:10,614 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 10:00:41] 2026-01-13 15:00:10,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 10:00:41] 2026-01-13 15:00:10,633 | INFO     | did not find any defunct processes belonging to 3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:10,652 | INFO     | did not find any defunct processes belonging to 3407193
[2026-01-13 10:00:41] 2026-01-13 15:00:10,652 | INFO     | ready for new job
[2026-01-13 10:00:41] 2026-01-13 15:00:10,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 10:00:41] 2026-01-13 15:00:10,661 | INFO     | ***************************************
[2026-01-13 10:00:41] 2026-01-13 15:00:10,661 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 10:00:41] 2026-01-13 15:00:10,661 | INFO     | ***************************************
[2026-01-13 10:00:41] 2026-01-13 15:00:10,661 | INFO     | 
[2026-01-13 10:00:41] 2026-01-13 15:00:10,667 | INFO     | architecture information:
[2026-01-13 10:00:41] 2026-01-13 15:00:10,668 | INFO     | executing command: cat /etc/os-release
[2026-01-13 10:00:41] 2026-01-13 15:00:10,685 | INFO     | cat /etc/os-release:
[2026-01-13 10:00:41] NAME="CentOS Linux"
[2026-01-13 10:00:41] VERSION="7 (Core)"
[2026-01-13 10:00:41] ID="centos"
[2026-01-13 10:00:41] ID_LIKE="rhel fedora"
[2026-01-13 10:00:41] VERSION_ID="7"
[2026-01-13 10:00:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 10:00:41] ANSI_COLOR="0;31"
[2026-01-13 10:00:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 10:00:41] HOME_URL="https://www.centos.org/"
[2026-01-13 10:00:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 10:00:41] 
[2026-01-13 10:00:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 10:00:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 10:00:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 10:00:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 10:00:41] 
[2026-01-13 10:00:41] 2026-01-13 15:00:10,685 | INFO     | ***************************************
[2026-01-13 10:00:41] 2026-01-13 15:00:11,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 10:00:41] 2026-01-13 15:00:11,209 | INFO     | sufficient remaining disk space (88297439232 B)
[2026-01-13 10:00:41] 2026-01-13 15:00:11,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 10:00:41] 2026-01-13 15:00:11,210 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 10:00:41] 2026-01-13 15:00:11,210 | INFO     | update_server=False
[2026-01-13 10:00:41] 2026-01-13 15:00:11,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 10:00:41] 2026-01-13 15:00:11,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 10:00:41] 2026-01-13 15:00:11,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 10:00:41] 2026-01-13 15:00:11,836 | INFO     | all data control threads have been joined
[2026-01-13 10:00:41] 2026-01-13 15:00:11,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:00:41] 2026-01-13 15:00:11,935 | INFO     | aborting loop
[2026-01-13 10:00:41] 2026-01-13 15:00:12,093 | INFO     | all payload control threads have been joined
[2026-01-13 10:00:41] 2026-01-13 15:00:12,215 | INFO     | [job] retrieve thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,237 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,295 | INFO     | all job control threads have been joined
[2026-01-13 10:00:41] 2026-01-13 15:00:12,501 | INFO     | [job] validate thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,504 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,685 | INFO     | [data] copytool_in thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,769 | INFO     | [payload] validate_post thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,781 | INFO     | [payload] failed_post thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,842 | INFO     | [data] control thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:12,940 | INFO     | [job] job monitor thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,099 | INFO     | [payload] control thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,142 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,217 | INFO     | [data] copytool_out thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,301 | INFO     | [job] control thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:13,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:00:41] 2026-01-13 15:00:14,838 | INFO     | [job] queue monitor thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:15,480 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 10:00:41] 2026-01-13 15:00:30,774 | INFO     | [monitor] cgroup control has ended
[2026-01-13 10:00:41] 2026-01-13 15:00:31,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640877569856)>', '<ExcThread(monitor, started 140640104998656)>']
[2026-01-13 10:00:41] 2026-01-13 15:00:36,441 | INFO     | all workflow threads have been joined
[2026-01-13 10:00:41] 2026-01-13 15:00:36,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 10:00:41] 2026-01-13 15:00:36,442 | INFO     | traces error code: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:36,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 10:00:41] 2026-01-13 15:00:41,358 | INFO     | PID=3379496 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-13 10:00:41] 2026-01-13 15:00:41,358 | INFO     | .. there are 25 such processes running
[2026-01-13 10:00:41] 2026-01-13 15:00:41,358 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 10:00:41] 2026-01-13 15:00:41,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 10:00:41] 2026-01-13 15:00:41,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 10:00:41] 2026-01-13 15:00:41,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 10:00:41] 2026-01-13 15:00:41,359 | INFO     | [monitor] control thread has ended
[2026-01-13 10:00:41] 2026-01-13 15:00:41,678 [wrapper] ==== pilot stdout END ====
[2026-01-13 10:00:41] 2026-01-13 15:00:41,681 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 10:00:41] 2026-01-13 15:00:41,683 [wrapper] pilotpid: 3379496
[2026-01-13 10:00:41] 2026-01-13 15:00:41,685 [wrapper] Pilot exit status: 0
[2026-01-13 10:00:41] 2026-01-13 15:00:41,701 [wrapper] pandaids: 6966861008
[2026-01-13 10:00:41] 2026-01-13 15:00:41,798 [wrapper] cleanup supervisor_pilot  531543 3379497
[2026-01-13 10:00:41] 2026-01-13 15:00:41,809 [wrapper] Test setup, not cleaning
[2026-01-13 10:00:41] 2026-01-13 15:00:41,812 [wrapper] apfmon messages muted
[2026-01-13 10:00:41] 2026-01-13 15:00:41,815 [wrapper] ==== wrapper stdout END ====
[2026-01-13 10:00:41] 2026-01-13 15:00:41,817 [wrapper] ==== wrapper stderr END ====
[2026-01-13 10:00:41]  *** Error codes and diagnostics ***
[2026-01-13 10:00:41]     "exeErrorCode": 0,
[2026-01-13 10:00:41]     "exeErrorDiag": "",
[2026-01-13 10:00:41]     "pilotErrorCode": 0,
[2026-01-13 10:00:41]     "pilotErrorDiag": "",
[2026-01-13 10:00:41]  *** Listing of results directory ***
[2026-01-13 10:00:41] total 1504200
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 10:00:41] -rwx------. 1 boincer umatlas      36322 Jan 12 03:56 runpilot2-wrapper.sh
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:56 queuedata.json
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 10:00:41] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:02 run_atlas
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:02 job.xml
[2026-01-13 10:00:41] -rw-r--r--. 2 boincer umatlas  322957752 Jan 12 04:02 EVNT.48118027._000203.pool.root.1
[2026-01-13 10:00:41] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:02 start_atlas.sh
[2026-01-13 10:00:41] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:02 shared
[2026-01-13 10:00:41] -rw-r--r--. 2 boincer umatlas     592602 Jan 12 04:02 input.tar.gz
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:02 boinc_lockfile
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas       2896 Jan 12 04:02 pandaJob.out
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas         57 Jan 12 04:02 setup.sh.local
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas     987688 Jan 12 04:03 agis_schedconf.cvmfs.json
[2026-01-13 10:00:41] drwx------. 5 boincer umatlas       4096 Jan 12 04:03 pilot3
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas        534 Jan 13 09:47 boinc_task_state.xml
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas       6879 Jan 13 09:56 init_data.xml
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas 1181092134 Jan 13 09:59 HITS.48187943._000987.pool.root.1
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas       1063 Jan 13 09:59 memory_monitor_summary.json
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas         95 Jan 13 09:59 pilot_heartbeat.json
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas    1516246 Jan 13 09:59 agis_ddmendpoints.agis.ALL.json
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas    3131840 Jan 13 09:59 log.48187943._000987.job.log.tgz.1
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas      27543 Jan 13 10:00 heartbeat.json
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas        824 Jan 13 10:00 pilotlog.txt
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas   13015508 Jan 13 10:00 log.48187943._000987.job.log.1
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 10:00 boinc_mmap_file
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas        353 Jan 13 10:00 output.list
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas         29 Jan 13 10:00 wrapper_checkpoint.txt
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas        620 Jan 13 10:00 runtime_log
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas   16189440 Jan 13 10:00 result.tar.gz
[2026-01-13 10:00:41] -rw-------. 1 boincer umatlas        666 Jan 13 10:00 Vr6MDmxtSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4InKDmrrgobm.diag
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas       9349 Jan 13 10:00 runtime_log.err
[2026-01-13 10:00:41] -rw-r--r--. 1 boincer umatlas      21111 Jan 13 10:00 stderr.txt
[2026-01-13 10:00:42] HITS file was successfully produced:
[2026-01-13 10:00:42] -rw-------. 1 boincer umatlas 1181092134 Jan 13 09:59 shared/HITS.pool.root.1
[2026-01-13 10:00:42]  *** Contents of shared directory: ***
[2026-01-13 10:00:42] total 1485216
[2026-01-13 10:00:42] -rw-r--r--. 2 boincer umatlas  322957752 Jan 12 04:02 ATLAS.root_0
[2026-01-13 10:00:42] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:02 start_atlas.sh
[2026-01-13 10:00:42] -rw-r--r--. 2 boincer umatlas     592602 Jan 12 04:02 input.tar.gz
[2026-01-13 10:00:42] -rw-------. 1 boincer umatlas 1181092134 Jan 13 09:59 HITS.pool.root.1
[2026-01-13 10:00:42] -rw-------. 1 boincer umatlas   16189440 Jan 13 10:00 result.tar.gz
10:00:43 (3368312): run_atlas exited; CPU time 311280.887757
10:00:43 (3368312): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN