Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:00:50 (25835): wrapper (7.7.26015): starting
04:00:50 (25835): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 04:00:50] Arguments: --nthreads 8
[2026-01-12 04:00:50] Threads: 8
[2026-01-12 04:00:50] Checking for CVMFS
[2026-01-12 04:00:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:00:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:00:51] 2.11.2.0 6491 76419 126928 155045 2 75 12488131 18432001 518 130560 0 45821129 99.991 2529726 34475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 04:00:51] CVMFS is ok
[2026-01-12 04:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:00:51] Further information can be found at the LHC@home message board.
[2026-01-12 04:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:00:51] Checking for apptainer binary...
[2026-01-12 04:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:00:51] Running /usr/bin/apptainer --version
[2026-01-12 04:00:51] apptainer version 1.3.2-1.el7
[2026-01-12 04:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:00:52] c-206-29.aglt2.org
[2026-01-12 04:00:52] apptainer works
[2026-01-12 04:00:52] Set ATHENA_PROC_NUMBER=8
[2026-01-12 04:00:52] Set ATHENA_CORE_NUMBER=8
[2026-01-12 04:00:52] Starting ATLAS job with PandaID=6966860641
[2026-01-12 04:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 04:07:57]  *** The last 200 lines of the pilot log: ***
[2026-01-13 04:07:57] 2026-01-13 09:07:20,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:07:57] 2026-01-13 09:07:21,638 | INFO     | time since job start (86776s) is within the limit (349056.0s)
[2026-01-13 04:07:57] 2026-01-13 09:07:23,298 | INFO     | monitor loop #6187: job 0:6966860641 is in state 'finished'
[2026-01-13 04:07:57] 2026-01-13 09:07:23,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 04:07:57] 2026-01-13 09:07:23,644 | INFO     | time since job start (86778s) is within the limit (349056.0s)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,246 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 04:07:57] 2026-01-13 09:07:24,251 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1657.0
[2026-01-13 04:07:57] 2026-01-13 09:07:24,254 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966860641/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,254 | INFO     | extracted standard info from prmon json
[2026-01-13 04:07:57] 2026-01-13 09:07:24,254 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 04:07:57] 2026-01-13 09:07:24,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 04:07:57] 2026-01-13 09:07:24,275 | INFO     | fitting pss+swap vs Time
[2026-01-13 04:07:57] 2026-01-13 09:07:24,277 | INFO     | sum of square deviations: 891613122178.1483
[2026-01-13 04:07:57] 2026-01-13 09:07:24,316 | INFO     | sum of deviations: 4052003877150.167
[2026-01-13 04:07:57] 2026-01-13 09:07:24,317 | INFO     | mean x: 1768251838.0520394
[2026-01-13 04:07:57] 2026-01-13 09:07:24,317 | INFO     | mean y: 3435724.3087201123
[2026-01-13 04:07:57] 2026-01-13 09:07:24,317 | INFO     | intersect: -8032519697.770836
[2026-01-13 04:07:57] 2026-01-13 09:07:24,318 | INFO     | chi2: 5.622192230363739
[2026-01-13 04:07:57] 2026-01-13 09:07:24,320 | INFO     | sum of square deviations: 882241176574.1199
[2026-01-13 04:07:57] 2026-01-13 09:07:24,359 | INFO     | sum of deviations: 4575183567922.533
[2026-01-13 04:07:57] 2026-01-13 09:07:24,359 | INFO     | mean x: 1768251685.5539873
[2026-01-13 04:07:57] 2026-01-13 09:07:24,359 | INFO     | mean y: 3444235.0388143966
[2026-01-13 04:07:57] 2026-01-13 09:07:24,359 | INFO     | intersect: -9166470149.498247
[2026-01-13 04:07:57] 2026-01-13 09:07:24,361 | INFO     | chi2: 2.9031908042450736
[2026-01-13 04:07:57] 2026-01-13 09:07:24,361 | INFO     | current chi2=2.9031908042450736 (change=48.36194343256659 %)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,362 | INFO     | sum of square deviations: 872935139182.5813
[2026-01-13 04:07:57] 2026-01-13 09:07:24,401 | INFO     | sum of deviations: 4605612876700.807
[2026-01-13 04:07:57] 2026-01-13 09:07:24,401 | INFO     | mean x: 1768251533.055949
[2026-01-13 04:07:57] 2026-01-13 09:07:24,401 | INFO     | mean y: 3444731.5467422097
[2026-01-13 04:07:57] 2026-01-13 09:07:24,401 | INFO     | intersect: -9325864703.189009
[2026-01-13 04:07:57] 2026-01-13 09:07:24,402 | INFO     | chi2: 2.816741938763444
[2026-01-13 04:07:57] 2026-01-13 09:07:24,402 | INFO     | current chi2=2.816741938763444 (change=2.977719044687776 %)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,403 | INFO     | right removable region: 1411
[2026-01-13 04:07:57] 2026-01-13 09:07:24,404 | INFO     | sum of square deviations: 882240697724.1201
[2026-01-13 04:07:57] 2026-01-13 09:07:24,442 | INFO     | sum of deviations: 3570513218151.1357
[2026-01-13 04:07:57] 2026-01-13 09:07:24,443 | INFO     | mean x: 1768251990.5539873
[2026-01-13 04:07:57] 2026-01-13 09:07:24,443 | INFO     | mean y: 3443551.913196895
[2026-01-13 04:07:57] 2026-01-13 09:07:24,443 | INFO     | intersect: -7152842846.551437
[2026-01-13 04:07:57] 2026-01-13 09:07:24,444 | INFO     | chi2: 3.1844271782331357
[2026-01-13 04:07:57] 2026-01-13 09:07:24,444 | INFO     | current chi2=3.1844271782331357 (change=43.359688752102436 %)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,446 | INFO     | sum of square deviations: 872934527475.0166
[2026-01-13 04:07:57] 2026-01-13 09:07:24,484 | INFO     | sum of deviations: 3456163159319.5864
[2026-01-13 04:07:57] 2026-01-13 09:07:24,484 | INFO     | mean x: 1768252143.053116
[2026-01-13 04:07:57] 2026-01-13 09:07:24,484 | INFO     | mean y: 3445425.2988668554
[2026-01-13 04:07:57] 2026-01-13 09:07:24,485 | INFO     | intersect: -6997501061.358455
[2026-01-13 04:07:57] 2026-01-13 09:07:24,486 | INFO     | chi2: 3.1276406682841915
[2026-01-13 04:07:57] 2026-01-13 09:07:24,486 | INFO     | current chi2=3.1276406682841915 (change=1.7832566666024976 %)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,486 | INFO     | left removable region: 20
[2026-01-13 04:07:57] 2026-01-13 09:07:24,487 | INFO     | sum of square deviations: 834563280351.3195
[2026-01-13 04:07:57] 2026-01-13 09:07:24,526 | INFO     | sum of deviations: 3834217651050.3584
[2026-01-13 04:07:57] 2026-01-13 09:07:24,526 | INFO     | mean x: 1768252112.5564342
[2026-01-13 04:07:57] 2026-01-13 09:07:24,526 | INFO     | mean y: 3457313.339324227
[2026-01-13 04:07:57] 2026-01-13 09:07:24,526 | INFO     | intersect: -8120388560.417427
[2026-01-13 04:07:57] 2026-01-13 09:07:24,527 | INFO     | chi2: 0.2728234160940473
[2026-01-13 04:07:57] 2026-01-13 09:07:24,527 | INFO     | current memory leak: 4.59 B/s (using 1391 data points, chi2=0.27)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,528 | INFO     | could have reported an average CPU frequency of 2565 MHz (51 samples)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,528 | INFO     | ..............................
[2026-01-13 04:07:57] 2026-01-13 09:07:24,528 | INFO     | . Timing measurements:
[2026-01-13 04:07:57] 2026-01-13 09:07:24,528 | INFO     | . get job = 0 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . initial setup = 2 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . payload setup = 12 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . stage-in = 0 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . payload execution = 86736 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . stage-out = 3 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | . log creation = 0 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,529 | INFO     | ..............................
[2026-01-13 04:07:57] 2026-01-13 09:07:24,614 | INFO     | 
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | job summary report
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | --------------------------------------------------
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | PanDA job id: 6966860641
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | task id: 48187943
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | errors: (none)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | pilot state: finished 
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | transexitcode: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:24,615 | INFO     | exeerrorcode: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | exeerrordiag: 
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | exitcode: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | exitmsg: OK
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | cpuconsumptiontime: 672369 s
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | nevents: 2050
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | neventsw: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | pid: 4526
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | pgrp: 4526
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | corecount: 8
[2026-01-13 04:07:57] 2026-01-13 09:07:24,616 | INFO     | event service: False
[2026-01-13 04:07:57] 2026-01-13 09:07:24,617 | INFO     | sizes: {0: 2284450, 1: 2284649, 5: 2284911, 11: 2284967, 86752: 2368739, 86756: 2377737, 86759: 2377921, 86764: 2378167}
[2026-01-13 04:07:57] 2026-01-13 09:07:24,617 | INFO     | --------------------------------------------------
[2026-01-13 04:07:57] 2026-01-13 09:07:24,617 | INFO     | 
[2026-01-13 04:07:57] 2026-01-13 09:07:24,617 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 04:07:57] 2026-01-13 09:07:24,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,642 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 04:07:57] 2026-01-13 09:07:24,642 | INFO     | job 6966860641 has completed (purged errors)
[2026-01-13 04:07:57] 2026-01-13 09:07:24,643 | INFO     | overall cleanup function is called
[2026-01-13 04:07:57] 2026-01-13 09:07:25,658 | INFO     | --- collectZombieJob: --- 10, [4526]
[2026-01-13 04:07:57] 2026-01-13 09:07:25,659 | INFO     | zombie collector waiting for pid 4526
[2026-01-13 04:07:57] 2026-01-13 09:07:25,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 04:07:57] 2026-01-13 09:07:25,659 | INFO     | collected zombie processes
[2026-01-13 04:07:57] 2026-01-13 09:07:25,659 | INFO     | will attempt to kill all subprocesses of pid=4526
[2026-01-13 04:07:57] 2026-01-13 09:07:25,758 | INFO     | process IDs to be killed: [4526] (in reverse order)
[2026-01-13 04:07:57] 2026-01-13 09:07:25,810 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 04:07:57] 2026-01-13 09:07:25,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 04:07:57] 2026-01-13 09:07:25,815 | INFO     | did not find any defunct processes belonging to 4526
[2026-01-13 04:07:57] 2026-01-13 09:07:25,819 | INFO     | did not find any defunct processes belonging to 4526
[2026-01-13 04:07:57] 2026-01-13 09:07:25,819 | INFO     | ready for new job
[2026-01-13 04:07:57] 2026-01-13 09:07:25,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 04:07:57] 2026-01-13 09:07:25,824 | INFO     | ***************************************
[2026-01-13 04:07:57] 2026-01-13 09:07:25,824 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 04:07:57] 2026-01-13 09:07:25,824 | INFO     | ***************************************
[2026-01-13 04:07:57] 2026-01-13 09:07:25,824 | INFO     | 
[2026-01-13 04:07:57] 2026-01-13 09:07:25,825 | INFO     | architecture information:
[2026-01-13 04:07:57] 2026-01-13 09:07:25,826 | INFO     | executing command: cat /etc/os-release
[2026-01-13 04:07:57] 2026-01-13 09:07:25,839 | INFO     | cat /etc/os-release:
[2026-01-13 04:07:57] NAME="CentOS Linux"
[2026-01-13 04:07:57] VERSION="7 (Core)"
[2026-01-13 04:07:57] ID="centos"
[2026-01-13 04:07:57] ID_LIKE="rhel fedora"
[2026-01-13 04:07:57] VERSION_ID="7"
[2026-01-13 04:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 04:07:57] ANSI_COLOR="0;31"
[2026-01-13 04:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 04:07:57] HOME_URL="https://www.centos.org/"
[2026-01-13 04:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 04:07:57] 
[2026-01-13 04:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 04:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 04:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 04:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 04:07:57] 
[2026-01-13 04:07:57] 2026-01-13 09:07:25,839 | INFO     | ***************************************
[2026-01-13 04:07:57] 2026-01-13 09:07:26,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 04:07:57] 2026-01-13 09:07:26,359 | INFO     | sufficient remaining disk space (27931967488 B)
[2026-01-13 04:07:57] 2026-01-13 09:07:26,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 04:07:57] 2026-01-13 09:07:26,359 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 04:07:57] 2026-01-13 09:07:26,360 | INFO     | update_server=False
[2026-01-13 04:07:57] 2026-01-13 09:07:26,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 04:07:57] 2026-01-13 09:07:26,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:07:57] 2026-01-13 09:07:26,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 04:07:57] 2026-01-13 09:07:26,517 | INFO     | all data control threads have been joined
[2026-01-13 04:07:57] 2026-01-13 09:07:26,776 | INFO     | all payload control threads have been joined
[2026-01-13 04:07:57] 2026-01-13 09:07:26,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 04:07:57] 2026-01-13 09:07:26,813 | INFO     | aborting loop
[2026-01-13 04:07:57] 2026-01-13 09:07:27,365 | INFO     | [job] retrieve thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,366 | INFO     | [job] queue monitor thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,438 | INFO     | [job] validate thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,522 | INFO     | [data] control thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,717 | INFO     | all job control threads have been joined
[2026-01-13 04:07:57] 2026-01-13 09:07:27,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 04:07:57] 2026-01-13 09:07:27,779 | INFO     | [payload] control thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,818 | INFO     | [job] job monitor thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:27,876 | INFO     | [monitor] cgroup control has ended
[2026-01-13 04:07:57] 2026-01-13 09:07:28,045 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,229 | INFO     | [payload] validate_post thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,453 | INFO     | [payload] failed_post thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,593 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,594 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,644 | INFO     | [data] copytool_in thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,722 | INFO     | [job] control thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:28,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:29,742 | INFO     | [data] copytool_out thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:30,366 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 04:07:57] 2026-01-13 09:07:32,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091251717952)>', '<ExcThread(monitor, started 140090676336384)>']
[2026-01-13 04:07:57] 2026-01-13 09:07:37,165 | INFO     | all workflow threads have been joined
[2026-01-13 04:07:57] 2026-01-13 09:07:37,166 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 04:07:57] 2026-01-13 09:07:37,166 | INFO     | traces error code: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:37,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | INFO     | PID=29546 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 04:07:57] 2026-01-13 09:07:56,852 | INFO     | [monitor] control thread has ended
[2026-01-13 04:07:57] 2026-01-13 09:07:56,933 [wrapper] ==== pilot stdout END ====
[2026-01-13 04:07:57] 2026-01-13 09:07:56,937 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 04:07:57] 2026-01-13 09:07:56,940 [wrapper] pilotpid: 29546
[2026-01-13 04:07:57] 2026-01-13 09:07:56,944 [wrapper] Pilot exit status: 0
[2026-01-13 04:07:57] 2026-01-13 09:07:56,957 [wrapper] pandaids: 6966860641
[2026-01-13 04:07:57] 2026-01-13 09:07:56,994 [wrapper] cleanup supervisor_pilot 18921 29547
[2026-01-13 04:07:57] 2026-01-13 09:07:56,998 [wrapper] Test setup, not cleaning
[2026-01-13 04:07:57] 2026-01-13 09:07:57,001 [wrapper] apfmon messages muted
[2026-01-13 04:07:57] 2026-01-13 09:07:57,005 [wrapper] ==== wrapper stdout END ====
[2026-01-13 04:07:57] 2026-01-13 09:07:57,009 [wrapper] ==== wrapper stderr END ====
[2026-01-13 04:07:57]  *** Error codes and diagnostics ***
[2026-01-13 04:07:57]     "exeErrorCode": 0,
[2026-01-13 04:07:57]     "exeErrorDiag": "",
[2026-01-13 04:07:57]     "pilotErrorCode": 0,
[2026-01-13 04:07:57]     "pilotErrorDiag": "",
[2026-01-13 04:07:57]  *** Listing of results directory ***
[2026-01-13 04:07:57] total 1512972
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 04:07:57] -rwx------ 1 boincer umatlas      36322 Jan 12 03:55 runpilot2-wrapper.sh
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:55 queuedata.json
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas        100 Jan 12 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 04:07:57] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 04:00 run_atlas
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas        105 Jan 12 04:00 job.xml
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas  323397269 Jan 12 04:00 EVNT.48118027._000191.pool.root.1
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 04:00 start_atlas.sh
[2026-01-13 04:07:57] drwxrwx--x 2 boincer umatlas       4096 Jan 12 04:00 shared
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 04:00 input.tar.gz
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas          0 Jan 12 04:00 boinc_lockfile
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas       2896 Jan 12 04:00 pandaJob.out
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas         57 Jan 12 04:00 setup.sh.local
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas     987688 Jan 12 04:01 agis_schedconf.cvmfs.json
[2026-01-13 04:07:57] drwx------ 5 boincer umatlas       4096 Jan 12 04:01 pilot3
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas        533 Jan 13 03:58 boinc_task_state.xml
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas       5952 Jan 13 04:00 init_data.xml
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas 1192270834 Jan 13 04:06 HITS.48187943._000929.pool.root.1
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas         95 Jan 13 04:07 pilot_heartbeat.json
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas       1080 Jan 13 04:07 memory_monitor_summary.json
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas    1516240 Jan 13 04:07 agis_ddmendpoints.agis.ALL.json
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas    2868718 Jan 13 04:07 log.48187943._000929.job.log.tgz.1
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas      27833 Jan 13 04:07 heartbeat.json
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas       8192 Jan 13 04:07 boinc_mmap_file
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas         29 Jan 13 04:07 wrapper_checkpoint.txt
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas        745 Jan 13 04:07 pilotlog.txt
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas   11965872 Jan 13 04:07 log.48187943._000929.job.log.1
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas        353 Jan 13 04:07 output.list
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas        620 Jan 13 04:07 runtime_log
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas   14868480 Jan 13 04:07 result.tar.gz
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas       9343 Jan 13 04:07 runtime_log.err
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas        668 Jan 13 04:07 AMiMDmzsSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIInKDmTMBVvn.diag
[2026-01-13 04:07:57] -rw-r--r-- 1 boincer umatlas      21227 Jan 13 04:07 stderr.txt
[2026-01-13 04:07:57] HITS file was successfully produced:
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas 1192270834 Jan 13 04:06 shared/HITS.pool.root.1
[2026-01-13 04:07:57]  *** Contents of shared directory: ***
[2026-01-13 04:07:57] total 1495268
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas  323397269 Jan 12 04:00 ATLAS.root_0
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 04:00 start_atlas.sh
[2026-01-13 04:07:57] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 04:00 input.tar.gz
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas 1192270834 Jan 13 04:06 HITS.pool.root.1
[2026-01-13 04:07:57] -rw------- 1 boincer umatlas   14868480 Jan 13 04:07 result.tar.gz
04:07:58 (25835): run_atlas exited; CPU time 669856.716904
04:07:58 (25835): called boinc_finish(0)

</stderr_txt>
]]>

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