Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:00:21 (8452): wrapper (7.7.26015): starting
04:00:21 (8452): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 04:00:21] Arguments: --nthreads 8
[2026-01-12 04:00:21] Threads: 8
[2026-01-12 04:00:21] Checking for CVMFS
[2026-01-12 04:00:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:00:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:00:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:00:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:00:22] 2.11.2.0 2893 133186 82984 155045 2 1 17986277 20275201 1 130560 0 33071354 99.813 8631231 33441 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 04:00:22] CVMFS is ok
[2026-01-12 04:00:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:00:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:00:22] Further information can be found at the LHC@home message board.
[2026-01-12 04:00:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:00:22] Checking for apptainer binary...
[2026-01-12 04:00:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:00:22] Running /usr/bin/apptainer --version
[2026-01-12 04:00:22] apptainer version 1.3.2-1.el7
[2026-01-12 04:00:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:00:24] c-204-22.aglt2.org
[2026-01-12 04:00:24] apptainer works
[2026-01-12 04:00:24] Set ATHENA_PROC_NUMBER=8
[2026-01-12 04:00:24] Set ATHENA_CORE_NUMBER=8
[2026-01-12 04:00:24] Starting ATLAS job with PandaID=6966859674
[2026-01-12 04:00:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 20:02:26]  *** The last 200 lines of the pilot log: ***
[2026-01-12 20:02:26] 2026-01-13 01:01:30,981 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 20:02:26] 2026-01-13 01:01:30,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 20:02:26] 2026-01-13 01:01:31,000 | INFO     | fitting pss+swap vs Time
[2026-01-12 20:02:26] 2026-01-13 01:01:31,001 | INFO     | sum of square deviations: 261684322595.4287
[2026-01-12 20:02:26] 2026-01-13 01:01:31,020 | INFO     | sum of deviations: 1590537892743.0022
[2026-01-12 20:02:26] 2026-01-13 01:01:31,020 | INFO     | mean x: 1768237277.4285715
[2026-01-12 20:02:26] 2026-01-13 01:01:31,020 | INFO     | mean y: 3434425.0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,020 | INFO     | intersect: -10744050809.180372
[2026-01-12 20:02:26] 2026-01-13 01:01:31,021 | INFO     | chi2: 7.189410716132687
[2026-01-12 20:02:26] 2026-01-13 01:01:31,022 | INFO     | sum of square deviations: 257552703534.50406
[2026-01-12 20:02:26] 2026-01-13 01:01:31,042 | INFO     | sum of deviations: 1999459419029.9353
[2026-01-12 20:02:26] 2026-01-13 01:01:31,042 | INFO     | mean x: 1768237124.930851
[2026-01-12 20:02:26] 2026-01-13 01:01:31,042 | INFO     | mean y: 3449518.060638298
[2026-01-12 20:02:26] 2026-01-13 01:01:31,042 | INFO     | intersect: -13723909294.337744
[2026-01-12 20:02:26] 2026-01-13 01:01:31,043 | INFO     | chi2: 3.5867013678856425
[2026-01-12 20:02:26] 2026-01-13 01:01:31,044 | INFO     | current chi2=3.5867013678856425 (change=50.111330267482714 %)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,045 | INFO     | sum of square deviations: 253464806223.5742
[2026-01-12 20:02:26] 2026-01-13 01:01:31,063 | INFO     | sum of deviations: 2107401660661.7751
[2026-01-12 20:02:26] 2026-01-13 01:01:31,063 | INFO     | mean x: 1768236972.433155
[2026-01-12 20:02:26] 2026-01-13 01:01:31,063 | INFO     | mean y: 3453528.052406417
[2026-01-12 20:02:26] 2026-01-13 01:01:31,063 | INFO     | intersect: -14698333231.495743
[2026-01-12 20:02:26] 2026-01-13 01:01:31,064 | INFO     | chi2: 2.6079986708103444
[2026-01-12 20:02:26] 2026-01-13 01:01:31,064 | INFO     | current chi2=2.6079986708103444 (change=27.28698591520159 %)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,065 | INFO     | sum of square deviations: 249420284029.86722
[2026-01-12 20:02:26] 2026-01-13 01:01:31,084 | INFO     | sum of deviations: 2086439058971.864
[2026-01-12 20:02:26] 2026-01-13 01:01:31,084 | INFO     | mean x: 1768236819.9333334
[2026-01-12 20:02:26] 2026-01-13 01:01:31,084 | INFO     | mean y: 3452737.659139785
[2026-01-12 20:02:26] 2026-01-13 01:01:31,084 | INFO     | intersect: -14788120373.448868
[2026-01-12 20:02:26] 2026-01-13 01:01:31,085 | INFO     | chi2: 2.605796438417392
[2026-01-12 20:02:26] 2026-01-13 01:01:31,085 | INFO     | current chi2=2.605796438417392 (change=0.08444146914646271 %)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,086 | INFO     | right removable region: 929
[2026-01-12 20:02:26] 2026-01-13 01:01:31,087 | INFO     | sum of square deviations: 257552456484.50385
[2026-01-12 20:02:26] 2026-01-13 01:01:31,106 | INFO     | sum of deviations: 1273291021723.5757
[2026-01-12 20:02:26] 2026-01-13 01:01:31,106 | INFO     | mean x: 1768237429.930851
[2026-01-12 20:02:26] 2026-01-13 01:01:31,106 | INFO     | mean y: 3446119.1319148936
[2026-01-12 20:02:26] 2026-01-13 01:01:31,106 | INFO     | intersect: -8738387969.885939
[2026-01-12 20:02:26] 2026-01-13 01:01:31,107 | INFO     | chi2: 4.830390114529704
[2026-01-12 20:02:26] 2026-01-13 01:01:31,108 | INFO     | current chi2=4.830390114529704 (change=32.812433379406954 %)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,109 | INFO     | sum of square deviations: 253464312123.57422
[2026-01-12 20:02:26] 2026-01-13 01:01:31,127 | INFO     | sum of deviations: 1217536808815.81
[2026-01-12 20:02:26] 2026-01-13 01:01:31,128 | INFO     | mean x: 1768237582.433155
[2026-01-12 20:02:26] 2026-01-13 01:01:31,128 | INFO     | mean y: 3448197.8449197863
[2026-01-12 20:02:26] 2026-01-13 01:01:31,128 | INFO     | intersect: -8490427430.271997
[2026-01-12 20:02:26] 2026-01-13 01:01:31,129 | INFO     | chi2: 4.8067125012840215
[2026-01-12 20:02:26] 2026-01-13 01:01:31,129 | INFO     | current chi2=4.8067125012840215 (change=0.49018014454901115 %)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,129 | INFO     | left removable region: 20
[2026-01-12 20:02:26] 2026-01-13 01:01:31,130 | INFO     | sum of square deviations: 232902438096.10107
[2026-01-12 20:02:26] 2026-01-13 01:01:31,150 | INFO     | sum of deviations: 1616913919878.5342
[2026-01-12 20:02:26] 2026-01-13 01:01:31,150 | INFO     | mean x: 1768237399.4411442
[2026-01-12 20:02:26] 2026-01-13 01:01:31,150 | INFO     | mean y: 3470458.103410341
[2026-01-12 20:02:26] 2026-01-13 01:01:31,150 | INFO     | intersect: -12272432225.347582
[2026-01-12 20:02:26] 2026-01-13 01:01:31,151 | INFO     | chi2: 0.16777486792230442
[2026-01-12 20:02:26] 2026-01-13 01:01:31,151 | INFO     | current memory leak: 6.94 B/s (using 909 data points, chi2=0.17)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,152 | INFO     | could have reported an average CPU frequency of 2173 MHz (35 samples)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,152 | INFO     | ..............................
[2026-01-12 20:02:26] 2026-01-13 01:01:31,152 | INFO     | . Timing measurements:
[2026-01-12 20:02:26] 2026-01-13 01:01:31,152 | INFO     | . get job = 0 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,152 | INFO     | . initial setup = 2 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | . payload setup = 17 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | . stage-in = 0 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | . payload execution = 57594 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | . stage-out = 4 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | . log creation = 0 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,153 | INFO     | ..............................
[2026-01-12 20:02:26] 2026-01-13 01:01:31,392 | INFO     | 
[2026-01-12 20:02:26] 2026-01-13 01:01:31,392 | INFO     | job summary report
[2026-01-12 20:02:26] 2026-01-13 01:01:31,392 | INFO     | --------------------------------------------------
[2026-01-12 20:02:26] 2026-01-13 01:01:31,392 | INFO     | PanDA job id: 6966859674
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | task id: 48187943
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | errors: (none)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | pilot state: finished 
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | transexitcode: 0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | exeerrorcode: 0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,393 | INFO     | exeerrordiag: 
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | exitcode: 0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | exitmsg: OK
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | cpuconsumptiontime: 447612 s
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | nevents: 2050
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | neventsw: 0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | pid: 19669
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | pgrp: 19669
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | corecount: 8
[2026-01-12 20:02:26] 2026-01-13 01:01:31,394 | INFO     | event service: False
[2026-01-12 20:02:26] 2026-01-13 01:01:31,395 | INFO     | sizes: {0: 2284621, 6: 2284883, 11: 2284911, 57615: 2356746, 57620: 2365800, 57629: 2365990}
[2026-01-12 20:02:26] 2026-01-13 01:01:31,395 | INFO     | --------------------------------------------------
[2026-01-12 20:02:26] 2026-01-13 01:01:31,395 | INFO     | 
[2026-01-12 20:02:26] 2026-01-13 01:01:31,395 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 20:02:26] 2026-01-13 01:01:31,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 20:02:26] 2026-01-13 01:01:31,428 | INFO     | job 6966859674 has completed (purged errors)
[2026-01-12 20:02:26] 2026-01-13 01:01:31,428 | INFO     | overall cleanup function is called
[2026-01-12 20:02:26] 2026-01-13 01:01:32,441 | INFO     | --- collectZombieJob: --- 10, [19669]
[2026-01-12 20:02:26] 2026-01-13 01:01:32,441 | INFO     | zombie collector waiting for pid 19669
[2026-01-12 20:02:26] 2026-01-13 01:01:32,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 20:02:26] 2026-01-13 01:01:32,442 | INFO     | collected zombie processes
[2026-01-12 20:02:26] 2026-01-13 01:01:32,442 | INFO     | will attempt to kill all subprocesses of pid=19669
[2026-01-12 20:02:26] 2026-01-13 01:01:32,536 | INFO     | process IDs to be killed: [19669] (in reverse order)
[2026-01-12 20:02:26] 2026-01-13 01:01:32,597 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 20:02:26] 2026-01-13 01:01:32,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 20:02:26] 2026-01-13 01:01:32,601 | INFO     | did not find any defunct processes belonging to 19669
[2026-01-12 20:02:26] 2026-01-13 01:01:32,605 | INFO     | did not find any defunct processes belonging to 19669
[2026-01-12 20:02:26] 2026-01-13 01:01:32,605 | INFO     | ready for new job
[2026-01-12 20:02:26] 2026-01-13 01:01:32,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 20:02:26] 2026-01-13 01:01:32,610 | INFO     | ***************************************
[2026-01-12 20:02:26] 2026-01-13 01:01:32,610 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 20:02:26] 2026-01-13 01:01:32,610 | INFO     | ***************************************
[2026-01-12 20:02:26] 2026-01-13 01:01:32,610 | INFO     | 
[2026-01-12 20:02:26] 2026-01-13 01:01:32,611 | INFO     | architecture information:
[2026-01-12 20:02:26] 2026-01-13 01:01:32,612 | INFO     | executing command: cat /etc/os-release
[2026-01-12 20:02:26] 2026-01-13 01:01:32,629 | INFO     | cat /etc/os-release:
[2026-01-12 20:02:26] NAME="CentOS Linux"
[2026-01-12 20:02:26] VERSION="7 (Core)"
[2026-01-12 20:02:26] ID="centos"
[2026-01-12 20:02:26] ID_LIKE="rhel fedora"
[2026-01-12 20:02:26] VERSION_ID="7"
[2026-01-12 20:02:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 20:02:26] ANSI_COLOR="0;31"
[2026-01-12 20:02:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 20:02:26] HOME_URL="https://www.centos.org/"
[2026-01-12 20:02:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 20:02:26] 
[2026-01-12 20:02:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 20:02:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 20:02:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 20:02:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 20:02:26] 
[2026-01-12 20:02:26] 2026-01-13 01:01:32,630 | INFO     | ***************************************
[2026-01-12 20:02:26] 2026-01-13 01:01:33,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 20:02:26] 2026-01-13 01:01:33,153 | INFO     | sufficient remaining disk space (17316184064 B)
[2026-01-12 20:02:26] 2026-01-13 01:01:33,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 20:02:26] 2026-01-13 01:01:33,154 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 20:02:26] 2026-01-13 01:01:33,154 | INFO     | update_server=False
[2026-01-12 20:02:26] 2026-01-13 01:01:33,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 20:02:26] 2026-01-13 01:01:33,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 20:02:26] 2026-01-13 01:01:33,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:02:26] 2026-01-13 01:01:33,260 | INFO     | all payload control threads have been joined
[2026-01-12 20:02:26] 2026-01-13 01:01:33,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 20:02:26] 2026-01-13 01:01:33,384 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 20:02:26] 2026-01-13 01:01:33,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 20:02:26] 2026-01-13 01:01:33,385 | INFO     | will abort loop
[2026-01-12 20:02:26] 2026-01-13 01:01:33,655 | INFO     | all job control threads have been joined
[2026-01-12 20:02:26] 2026-01-13 01:01:33,945 | INFO     | all data control threads have been joined
[2026-01-12 20:02:26] 2026-01-13 01:01:34,160 | INFO     | [job] retrieve thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,161 | INFO     | [job] queue monitor thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,263 | INFO     | [payload] control thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,392 | INFO     | [job] job monitor thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 20:02:26] 2026-01-13 01:01:34,646 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,661 | INFO     | [job] control thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,943 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:34,949 | INFO     | [data] control thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,049 | INFO     | [job] validate thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,242 | INFO     | [payload] failed_post thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,446 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,508 | INFO     | [data] copytool_in thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,527 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:35,593 | INFO     | [payload] validate_post thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:36,434 | INFO     | [data] copytool_out thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:01:37,158 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 20:02:26] 2026-01-13 01:02:03,306 | INFO     | PID=12500 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 20:02:26] 2026-01-13 01:02:03,307 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 20:02:26] 2026-01-13 01:02:03,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 20:02:26] 2026-01-13 01:02:03,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 20:02:26] 2026-01-13 01:02:19,271 | INFO     | [monitor] cgroup control has ended
[2026-01-12 20:02:26] 2026-01-13 01:02:20,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720079812416)>', '<ExcThread(monitor, started 140719326996224)>']
[2026-01-12 20:02:26] 2026-01-13 01:02:21,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 20:02:26] 2026-01-13 01:02:21,379 | INFO     | [monitor] control thread has ended
[2026-01-12 20:02:26] 2026-01-13 01:02:25,669 | INFO     | all workflow threads have been joined
[2026-01-12 20:02:26] 2026-01-13 01:02:25,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 20:02:26] 2026-01-13 01:02:25,674 | INFO     | traces error code: 0
[2026-01-12 20:02:26] 2026-01-13 01:02:25,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 20:02:26] 2026-01-13 01:02:25,799 [wrapper] ==== pilot stdout END ====
[2026-01-12 20:02:26] 2026-01-13 01:02:25,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 20:02:26] 2026-01-13 01:02:25,808 [wrapper] pilotpid: 12500
[2026-01-12 20:02:26] 2026-01-13 01:02:25,813 [wrapper] Pilot exit status: 0
[2026-01-12 20:02:26] 2026-01-13 01:02:25,828 [wrapper] pandaids: 6966859674
[2026-01-12 20:02:26] 2026-01-13 01:02:25,883 [wrapper] cleanup supervisor_pilot 16765 12501
[2026-01-12 20:02:26] 2026-01-13 01:02:25,888 [wrapper] Test setup, not cleaning
[2026-01-12 20:02:26] 2026-01-13 01:02:25,892 [wrapper] apfmon messages muted
[2026-01-12 20:02:26] 2026-01-13 01:02:25,897 [wrapper] ==== wrapper stdout END ====
[2026-01-12 20:02:26] 2026-01-13 01:02:25,902 [wrapper] ==== wrapper stderr END ====
[2026-01-12 20:02:26]  *** Error codes and diagnostics ***
[2026-01-12 20:02:26]     "exeErrorCode": 0,
[2026-01-12 20:02:26]     "exeErrorDiag": "",
[2026-01-12 20:02:26]     "pilotErrorCode": 0,
[2026-01-12 20:02:26]     "pilotErrorDiag": "",
[2026-01-12 20:02:26]  *** Listing of results directory ***
[2026-01-12 20:02:26] total 1513992
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-12 20:02:26] -rwx------ 1 boincer umatlas      36322 Jan 12 03:53 runpilot2-wrapper.sh
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:53 queuedata.json
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas        100 Jan 12 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 20:02:26] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 04:00 run_atlas
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas        105 Jan 12 04:00 job.xml
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas  320585257 Jan 12 04:00 EVNT.48118027._000159.pool.root.1
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 04:00 start_atlas.sh
[2026-01-12 20:02:26] drwxrwx--x 2 boincer umatlas       4096 Jan 12 04:00 shared
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 04:00 input.tar.gz
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas          0 Jan 12 04:00 boinc_lockfile
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas       2896 Jan 12 04:00 pandaJob.out
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas         57 Jan 12 04:00 setup.sh.local
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas     987688 Jan 12 04:00 agis_schedconf.cvmfs.json
[2026-01-12 20:02:26] drwx------ 5 boincer umatlas       4096 Jan 12 04:00 pilot3
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas        533 Jan 12 19:52 boinc_task_state.xml
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas       5911 Jan 12 19:56 init_data.xml
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas 1204910640 Jan 12 20:00 HITS.48187943._000773.pool.root.1
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas       1062 Jan 12 20:01 memory_monitor_summary.json
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas    1516240 Jan 12 20:01 agis_ddmendpoints.agis.ALL.json
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas    2505675 Jan 12 20:01 log.48187943._000773.job.log.tgz.1
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas         95 Jan 12 20:01 pilot_heartbeat.json
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas      28296 Jan 12 20:01 heartbeat.json
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas       8192 Jan 12 20:02 boinc_mmap_file
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas         29 Jan 12 20:02 wrapper_checkpoint.txt
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas       4932 Jan 12 20:02 pilotlog.txt
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas    7932650 Jan 12 20:02 log.48187943._000773.job.log.1
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas        353 Jan 12 20:02 output.list
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas        620 Jan 12 20:02 runtime_log
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas   10475520 Jan 12 20:02 result.tar.gz
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas       9343 Jan 12 20:02 runtime_log.err
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas        669 Jan 12 20:02 qu2MDm2qSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEHnKDmgXCeom.diag
[2026-01-12 20:02:26] -rw-r--r-- 1 boincer umatlas      20974 Jan 12 20:02 stderr.txt
[2026-01-12 20:02:26] HITS file was successfully produced:
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas 1204910640 Jan 12 20:00 shared/HITS.pool.root.1
[2026-01-12 20:02:26]  *** Contents of shared directory: ***
[2026-01-12 20:02:26] total 1500580
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas  320585257 Jan 12 04:00 ATLAS.root_0
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 04:00 start_atlas.sh
[2026-01-12 20:02:26] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 04:00 input.tar.gz
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas 1204910640 Jan 12 20:00 HITS.pool.root.1
[2026-01-12 20:02:26] -rw------- 1 boincer umatlas   10475520 Jan 12 20:02 result.tar.gz
20:02:27 (8452): run_atlas exited; CPU time 440415.943497
20:02:27 (8452): called boinc_finish(0)

</stderr_txt>
]]>

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