Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:11 (437621): wrapper (7.7.26015): starting
03:56:11 (437621): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:56:11] Arguments: --nthreads 9
[2026-01-12 03:56:11] Threads: 9
[2026-01-12 03:56:11] Checking for CVMFS
[2026-01-12 03:56:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:56:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:56:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:56:11] 2.13.3.0 11285 97472 172480 155045 1 342 24953076 32935937 17374 16776704 0 541695895 99.542 695859300 37218 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:56:11] CVMFS is ok
[2026-01-12 03:56:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:56:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:56:11] Further information can be found at the LHC@home message board.
[2026-01-12 03:56:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:56:11] Checking for apptainer binary...
[2026-01-12 03:56:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:56:11] Running /usr/bin/apptainer --version
[2026-01-12 03:56:11] apptainer version 1.4.5-2.el9
[2026-01-12 03:56:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:56:11] c7-3-29.aglt2.org
[2026-01-12 03:56:11] apptainer works
[2026-01-12 03:56:11] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:56:11] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:56:11] Starting ATLAS job with PandaID=6966860546
[2026-01-12 03:56:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 23:42:57]  *** The last 200 lines of the pilot log: ***
[2026-01-12 23:42:57] 2026-01-13 04:41:45,233 | INFO     | time since job start (71117s) is within the limit (349056.0s)
[2026-01-12 23:42:57] 2026-01-13 04:41:45,769 | INFO     | monitor loop #4669: job 0:6966860546 is in state 'finished'
[2026-01-12 23:42:57] 2026-01-13 04:41:45,770 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,240 | INFO     | time since job start (71119s) is within the limit (349056.0s)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,577 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 23:42:57] 2026-01-13 04:41:47,582 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3231.017385416666
[2026-01-12 23:42:57] 2026-01-13 04:41:47,595 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966860546/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,595 | INFO     | extracted standard info from prmon json
[2026-01-12 23:42:57] 2026-01-13 04:41:47,596 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 23:42:57] 2026-01-13 04:41:47,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 23:42:57] 2026-01-13 04:41:47,610 | INFO     | fitting pss+swap vs Time
[2026-01-12 23:42:57] 2026-01-13 04:41:47,611 | INFO     | sum of square deviations: 490250665411.2319
[2026-01-12 23:42:57] 2026-01-13 04:41:47,633 | INFO     | sum of deviations: 3313629368162.6084
[2026-01-12 23:42:57] 2026-01-13 04:41:47,633 | INFO     | mean x: 1768243738.9038627
[2026-01-12 23:42:57] 2026-01-13 04:41:47,633 | INFO     | mean y: 3586497.219742489
[2026-01-12 23:42:57] 2026-01-13 04:41:47,633 | INFO     | intersect: -11948063539.576426
[2026-01-12 23:42:57] 2026-01-13 04:41:47,634 | INFO     | chi2: 10.0376639996987
[2026-01-12 23:42:57] 2026-01-13 04:41:47,635 | INFO     | sum of square deviations: 483965960723.88824
[2026-01-12 23:42:57] 2026-01-13 04:41:47,656 | INFO     | sum of deviations: 3835204073982.9307
[2026-01-12 23:42:57] 2026-01-13 04:41:47,657 | INFO     | mean x: 1768243586.4163792
[2026-01-12 23:42:57] 2026-01-13 04:41:47,657 | INFO     | mean y: 3599154.2879310343
[2026-01-12 23:42:57] 2026-01-13 04:41:47,657 | INFO     | intersect: -14008904940.576094
[2026-01-12 23:42:57] 2026-01-13 04:41:47,658 | INFO     | chi2: 6.4197300827074075
[2026-01-12 23:42:57] 2026-01-13 04:41:47,658 | INFO     | current chi2=6.4197300827074075 (change=36.04358461390908 %)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,659 | INFO     | sum of square deviations: 477735210536.1783
[2026-01-12 23:42:57] 2026-01-13 04:41:47,680 | INFO     | sum of deviations: 4223414363269.995
[2026-01-12 23:42:57] 2026-01-13 04:41:47,680 | INFO     | mean x: 1768243433.9290044
[2026-01-12 23:42:57] 2026-01-13 04:41:47,680 | INFO     | mean y: 3608647.585281385
[2026-01-12 23:42:57] 2026-01-13 04:41:47,680 | INFO     | intersect: -15628533492.894592
[2026-01-12 23:42:57] 2026-01-13 04:41:47,681 | INFO     | chi2: 4.0764044407334
[2026-01-12 23:42:57] 2026-01-13 04:41:47,681 | INFO     | current chi2=4.0764044407334 (change=36.50193406551684 %)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,682 | INFO     | sum of square deviations: 471558112079.4791
[2026-01-12 23:42:57] 2026-01-13 04:41:47,716 | INFO     | sum of deviations: 4440538523259.537
[2026-01-12 23:42:57] 2026-01-13 04:41:47,717 | INFO     | mean x: 1768243281.4408696
[2026-01-12 23:42:57] 2026-01-13 04:41:47,717 | INFO     | mean y: 3614005.5373913045
[2026-01-12 23:42:57] 2026-01-13 04:41:47,717 | INFO     | intersect: -16647467183.81478
[2026-01-12 23:42:57] 2026-01-13 04:41:47,718 | INFO     | chi2: 3.2702585326649607
[2026-01-12 23:42:57] 2026-01-13 04:41:47,718 | INFO     | current chi2=3.2702585326649607 (change=19.775905943312214 %)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,718 | INFO     | right removable region: 1149
[2026-01-12 23:42:57] 2026-01-13 04:41:47,719 | INFO     | sum of square deviations: 483963967919.7202
[2026-01-12 23:42:57] 2026-01-13 04:41:47,744 | INFO     | sum of deviations: 2887087499763.218
[2026-01-12 23:42:57] 2026-01-13 04:41:47,744 | INFO     | mean x: 1768243891.4155173
[2026-01-12 23:42:57] 2026-01-13 04:41:47,744 | INFO     | mean y: 3596834.9103448275
[2026-01-12 23:42:57] 2026-01-13 04:41:47,744 | INFO     | intersect: -10544863740.330736
[2026-01-12 23:42:57] 2026-01-13 04:41:47,745 | INFO     | chi2: 7.560008267379675
[2026-01-12 23:42:57] 2026-01-13 04:41:47,745 | INFO     | current chi2=7.560008267379675 (change=24.683589054120525 %)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,745 | INFO     | left removable region: 10
[2026-01-12 23:42:57] 2026-01-13 04:41:47,746 | INFO     | sum of square deviations: 458153734996.34406
[2026-01-12 23:42:57] 2026-01-13 04:41:47,770 | INFO     | sum of deviations: 3949190465141.339
[2026-01-12 23:42:57] 2026-01-13 04:41:47,770 | INFO     | mean x: 1768243555.9517121
[2026-01-12 23:42:57] 2026-01-13 04:41:47,770 | INFO     | mean y: 3628106.0790166813
[2026-01-12 23:42:57] 2026-01-13 04:41:47,770 | INFO     | intersect: -15238265733.91738
[2026-01-12 23:42:57] 2026-01-13 04:41:47,771 | INFO     | chi2: 0.5930676652047936
[2026-01-12 23:42:57] 2026-01-13 04:41:47,771 | INFO     | current memory leak: 8.62 B/s (using 1139 data points, chi2=0.59)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | could have reported an average CPU frequency of 3180 MHz (43 samples)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | ..............................
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | . Timing measurements:
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | . get job = 0 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | . initial setup = 3 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,772 | INFO     | . payload setup = 18 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,773 | INFO     | . stage-in = 0 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,773 | INFO     | . payload execution = 71059 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,773 | INFO     | . stage-out = 4 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,773 | INFO     | . log creation = 1 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,773 | INFO     | ..............................
[2026-01-12 23:42:57] 2026-01-13 04:41:47,870 | INFO     | 
[2026-01-12 23:42:57] 2026-01-13 04:41:47,870 | INFO     | job summary report
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | --------------------------------------------------
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | PanDA job id: 6966860546
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | task id: 48187943
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | errors: (none)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | pilot state: finished 
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | transexitcode: 0
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | exeerrorcode: 0
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | exeerrordiag: 
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | exitcode: 0
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | exitmsg: OK
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | cpuconsumptiontime: 241893 s
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | nevents: 2050
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | neventsw: 0
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | pid: 458531
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | pgrp: 458531
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | corecount: 9
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | event service: False
[2026-01-12 23:42:57] 2026-01-13 04:41:47,871 | INFO     | sizes: {0: 2284621, 7: 2284883, 11: 2284911, 71082: 2362858, 71087: 2371856, 71088: 2371912, 71102: 2372286}
[2026-01-12 23:42:57] 2026-01-13 04:41:47,872 | INFO     | --------------------------------------------------
[2026-01-12 23:42:57] 2026-01-13 04:41:47,872 | INFO     | 
[2026-01-12 23:42:57] 2026-01-13 04:41:47,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 23:42:57] 2026-01-13 04:41:47,896 | INFO     | job 6966860546 has completed (purged errors)
[2026-01-12 23:42:57] 2026-01-13 04:41:47,897 | INFO     | overall cleanup function is called
[2026-01-12 23:42:57] 2026-01-13 04:41:48,914 | INFO     | --- collectZombieJob: --- 10, [458531]
[2026-01-12 23:42:57] 2026-01-13 04:41:48,914 | INFO     | zombie collector waiting for pid 458531
[2026-01-12 23:42:57] 2026-01-13 04:41:48,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 23:42:57] 2026-01-13 04:41:48,915 | INFO     | collected zombie processes
[2026-01-12 23:42:57] 2026-01-13 04:41:48,915 | INFO     | will attempt to kill all subprocesses of pid=458531
[2026-01-12 23:42:57] 2026-01-13 04:41:49,808 | INFO     | process IDs to be killed: [458531] (in reverse order)
[2026-01-12 23:42:57] 2026-01-13 04:41:50,284 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 23:42:57] 2026-01-13 04:41:50,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 23:42:57] 2026-01-13 04:41:50,306 | INFO     | did not find any defunct processes belonging to 458531
[2026-01-12 23:42:57] 2026-01-13 04:41:50,347 | INFO     | did not find any defunct processes belonging to 458531
[2026-01-12 23:42:57] 2026-01-13 04:41:50,347 | INFO     | ready for new job
[2026-01-12 23:42:57] 2026-01-13 04:41:50,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 23:42:57] 2026-01-13 04:41:50,399 | INFO     | ***************************************
[2026-01-12 23:42:57] 2026-01-13 04:41:50,400 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 23:42:57] 2026-01-13 04:41:50,400 | INFO     | ***************************************
[2026-01-12 23:42:57] 2026-01-13 04:41:50,400 | INFO     | 
[2026-01-12 23:42:57] 2026-01-13 04:41:50,424 | INFO     | architecture information:
[2026-01-12 23:42:57] 2026-01-13 04:41:50,435 | INFO     | executing command: cat /etc/os-release
[2026-01-12 23:42:57] 2026-01-13 04:41:50,525 | INFO     | cat /etc/os-release:
[2026-01-12 23:42:57] NAME="CentOS Linux"
[2026-01-12 23:42:57] VERSION="7 (Core)"
[2026-01-12 23:42:57] ID="centos"
[2026-01-12 23:42:57] ID_LIKE="rhel fedora"
[2026-01-12 23:42:57] VERSION_ID="7"
[2026-01-12 23:42:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 23:42:57] ANSI_COLOR="0;31"
[2026-01-12 23:42:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 23:42:57] HOME_URL="https://www.centos.org/"
[2026-01-12 23:42:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 23:42:57] 
[2026-01-12 23:42:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 23:42:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 23:42:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 23:42:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 23:42:57] 
[2026-01-12 23:42:57] 2026-01-13 04:41:50,526 | INFO     | ***************************************
[2026-01-12 23:42:57] 2026-01-13 04:41:51,029 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 23:42:57] 2026-01-13 04:41:51,057 | INFO     | sufficient remaining disk space (68366106624 B)
[2026-01-12 23:42:57] 2026-01-13 04:41:51,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 23:42:57] 2026-01-13 04:41:51,057 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 23:42:57] 2026-01-13 04:41:51,057 | INFO     | update_server=False
[2026-01-12 23:42:57] 2026-01-13 04:41:51,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 23:42:57] 2026-01-13 04:41:51,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 23:42:57] 2026-01-13 04:41:51,106 | INFO     | all data control threads have been joined
[2026-01-12 23:42:57] 2026-01-13 04:41:51,581 | INFO     | all job control threads have been joined
[2026-01-12 23:42:57] 2026-01-13 04:41:51,686 | INFO     | all payload control threads have been joined
[2026-01-12 23:42:57] 2026-01-13 04:41:51,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:42:57] 2026-01-13 04:41:51,794 | INFO     | aborting loop
[2026-01-12 23:42:57] 2026-01-13 04:41:52,063 | INFO     | [job] retrieve thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,112 | INFO     | [data] control thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,581 | INFO     | [payload] failed_post thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,587 | INFO     | [job] control thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,696 | INFO     | [payload] control thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,775 | INFO     | [data] copytool_in thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,776 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,790 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,800 | INFO     | [job] job monitor thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:52,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 23:42:57] 2026-01-13 04:41:52,916 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:53,031 | INFO     | [payload] validate_post thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:53,052 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:53,064 | INFO     | [data] copytool_out thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:53,293 | INFO     | [job] validate thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:53,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 23:42:57] 2026-01-13 04:41:53,890 | INFO     | [job] queue monitor thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:41:57,802 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 23:42:57] 2026-01-13 04:42:21,540 | INFO     | PID=441879 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 23:42:57] 2026-01-13 04:42:21,540 | INFO     | .. there are 36 such processes running
[2026-01-12 23:42:57] 2026-01-13 04:42:21,540 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 23:42:57] 2026-01-13 04:42:21,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 23:42:57] 2026-01-13 04:42:21,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 23:42:57] 2026-01-13 04:42:30,150 | INFO     | [monitor] cgroup control has ended
[2026-01-12 23:42:57] 2026-01-13 04:42:31,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140625919551296)>', '<ExcThread(monitor, started 140625198438144)>']
[2026-01-12 23:42:57] 2026-01-13 04:42:31,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 23:42:57] 2026-01-13 04:42:31,600 | INFO     | [monitor] control thread has ended
[2026-01-12 23:42:57] 2026-01-13 04:42:36,301 | INFO     | all workflow threads have been joined
[2026-01-12 23:42:57] 2026-01-13 04:42:36,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 23:42:57] 2026-01-13 04:42:36,302 | INFO     | traces error code: 0
[2026-01-12 23:42:57] 2026-01-13 04:42:36,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 23:42:57] 2026-01-13 04:42:36,460 [wrapper] ==== pilot stdout END ====
[2026-01-12 23:42:57] 2026-01-13 04:42:36,466 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 23:42:57] 2026-01-13 04:42:36,468 [wrapper] pilotpid: 441879
[2026-01-12 23:42:57] 2026-01-13 04:42:36,470 [wrapper] Pilot exit status: 0
[2026-01-12 23:42:57] 2026-01-13 04:42:36,482 [wrapper] pandaids: 6966860546
[2026-01-12 23:42:57] 2026-01-13 04:42:36,589 [wrapper] cleanup supervisor_pilot 1299866 441880
[2026-01-12 23:42:57] 2026-01-13 04:42:36,592 [wrapper] Test setup, not cleaning
[2026-01-12 23:42:57] 2026-01-13 04:42:36,627 [wrapper] apfmon messages muted
[2026-01-12 23:42:57] 2026-01-13 04:42:36,671 [wrapper] ==== wrapper stdout END ====
[2026-01-12 23:42:57] 2026-01-13 04:42:36,688 [wrapper] ==== wrapper stderr END ====
[2026-01-12 23:42:57]  *** Error codes and diagnostics ***
[2026-01-12 23:42:57]     "exeErrorCode": 0,
[2026-01-12 23:42:57]     "exeErrorDiag": "",
[2026-01-12 23:42:57]     "pilotErrorCode": 0,
[2026-01-12 23:42:57]     "pilotErrorDiag": "",
[2026-01-12 23:42:57]  *** Listing of results directory ***
[2026-01-12 23:42:57] total 1504804
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:53 queuedata.json
[2026-01-12 23:42:57] -rwx------. 1 boincer umatlas      36322 Jan 12 03:54 runpilot2-wrapper.sh
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 23:42:57] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:56 run_atlas
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:56 job.xml
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas  322431538 Jan 12 03:56 EVNT.48118027._000175.pool.root.1
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:56 start_atlas.sh
[2026-01-12 23:42:57] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:56 shared
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:56 input.tar.gz
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:56 boinc_lockfile
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas       2896 Jan 12 03:56 pandaJob.out
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas         57 Jan 12 03:56 setup.sh.local
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas     987688 Jan 12 03:56 agis_schedconf.cvmfs.json
[2026-01-12 23:42:57] drwx------. 5 boincer umatlas       4096 Jan 12 03:56 pilot3
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas        532 Jan 12 23:21 boinc_task_state.xml
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas       6946 Jan 12 23:36 init_data.xml
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas 1190176477 Jan 12 23:40 HITS.48187943._000852.pool.root.1
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas       1069 Jan 12 23:41 memory_monitor_summary.json
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas    1516240 Jan 12 23:41 agis_ddmendpoints.agis.ALL.json
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas    2747315 Jan 12 23:41 log.48187943._000852.job.log.tgz.1
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas         95 Jan 12 23:41 pilot_heartbeat.json
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas      27490 Jan 12 23:41 heartbeat.json
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas       4823 Jan 12 23:42 pilotlog.txt
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas    9428510 Jan 12 23:42 log.48187943._000852.job.log.1
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas        353 Jan 12 23:42 output.list
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas        620 Jan 12 23:42 runtime_log
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas   12216320 Jan 12 23:42 result.tar.gz
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas       9338 Jan 12 23:42 runtime_log.err
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas        666 Jan 12 23:42 4fyKDmBsSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmimhKDmMBcqTn.diag
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas         29 Jan 12 23:42 wrapper_checkpoint.txt
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 23:42 boinc_mmap_file
[2026-01-12 23:42:57] -rw-r--r--. 1 boincer umatlas      21216 Jan 12 23:42 stderr.txt
[2026-01-12 23:42:57] HITS file was successfully produced:
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas 1190176477 Jan 12 23:40 shared/HITS.pool.root.1
[2026-01-12 23:42:57]  *** Contents of shared directory: ***
[2026-01-12 23:42:57] total 1489696
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas  322431538 Jan 12 03:56 ATLAS.root_0
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:56 start_atlas.sh
[2026-01-12 23:42:57] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:56 input.tar.gz
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas 1190176477 Jan 12 23:40 HITS.pool.root.1
[2026-01-12 23:42:57] -rw-------. 1 boincer umatlas   12216320 Jan 12 23:42 result.tar.gz
23:42:59 (437621): run_atlas exited; CPU time 241542.493476
23:42:59 (437621): called boinc_finish(0)

</stderr_txt>
]]>

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