Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:04 (24975): wrapper (7.7.26015): starting
03:56:04 (24975): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:56:04] Arguments: --nthreads 8
[2026-01-12 03:56:04] Threads: 8
[2026-01-12 03:56:04] Checking for CVMFS
[2026-01-12 03:56:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:56:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:56:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:56:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:56:04] 2.11.2.0 6956 185124 138632 155045 2 76 13840119 18432000 1610 130560 0 123212399 99.979 7218854 33126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:56:04] CVMFS is ok
[2026-01-12 03:56:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:56:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:56:04] Further information can be found at the LHC@home message board.
[2026-01-12 03:56:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:56:04] Checking for apptainer binary...
[2026-01-12 03:56:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:56:04] Running /usr/bin/apptainer --version
[2026-01-12 03:56:04] apptainer version 1.3.2-1.el7
[2026-01-12 03:56:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:56:05] c-206-16.aglt2.org
[2026-01-12 03:56:05] apptainer works
[2026-01-12 03:56:05] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:56:05] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:56:05] Starting ATLAS job with PandaID=6966860478
[2026-01-12 03:56:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 03:50:44]  *** The last 200 lines of the pilot log: ***
[2026-01-13 03:50:44] 2026-01-13 08:49:48,994 | INFO     | time since job start (86012s) is within the limit (349056.0s)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,220 | INFO     | monitor loop #6151: job 0:6966860478 is in state 'finished'
[2026-01-13 03:50:44] 2026-01-13 08:49:50,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,489 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 03:50:44] 2026-01-13 08:49:50,495 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1679.1666666666667
[2026-01-13 03:50:44] 2026-01-13 08:49:50,499 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966860478/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,500 | INFO     | extracted standard info from prmon json
[2026-01-13 03:50:44] 2026-01-13 08:49:50,500 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 03:50:44] 2026-01-13 08:49:50,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 03:50:44] 2026-01-13 08:49:50,519 | INFO     | fitting pss+swap vs Time
[2026-01-13 03:50:44] 2026-01-13 08:49:50,520 | INFO     | sum of square deviations: 869231338160.5991
[2026-01-13 03:50:44] 2026-01-13 08:49:50,558 | INFO     | sum of deviations: 3863883594982.1953
[2026-01-13 03:50:44] 2026-01-13 08:49:50,559 | INFO     | mean x: 1768251180.067376
[2026-01-13 03:50:44] 2026-01-13 08:49:50,559 | INFO     | mean y: 3455905.734751773
[2026-01-13 03:50:44] 2026-01-13 08:49:50,559 | INFO     | intersect: -7856726334.04536
[2026-01-13 03:50:44] 2026-01-13 08:49:50,560 | INFO     | chi2: 6.861467270178612
[2026-01-13 03:50:44] 2026-01-13 08:49:50,562 | INFO     | sum of square deviations: 860017186136.4817
[2026-01-13 03:50:44] 2026-01-13 08:49:50,599 | INFO     | sum of deviations: 4514943291435.35
[2026-01-13 03:50:44] 2026-01-13 08:49:50,599 | INFO     | mean x: 1768251027.569395
[2026-01-13 03:50:44] 2026-01-13 08:49:50,599 | INFO     | mean y: 3466681.92455516
[2026-01-13 03:50:44] 2026-01-13 08:49:50,599 | INFO     | intersect: -9279549103.333418
[2026-01-13 03:50:44] 2026-01-13 08:49:50,600 | INFO     | chi2: 2.879535414857582
[2026-01-13 03:50:44] 2026-01-13 08:49:50,601 | INFO     | current chi2=2.879535414857582 (change=58.03324126644674 %)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,602 | INFO     | sum of square deviations: 850868384174.8572
[2026-01-13 03:50:44] 2026-01-13 08:49:50,639 | INFO     | sum of deviations: 4537133919118.72
[2026-01-13 03:50:44] 2026-01-13 08:49:50,639 | INFO     | mean x: 1768250875.0714285
[2026-01-13 03:50:44] 2026-01-13 08:49:50,639 | INFO     | mean y: 3467050.0828571427
[2026-01-13 03:50:44] 2026-01-13 08:49:50,639 | INFO     | intersect: -9425477745.625072
[2026-01-13 03:50:44] 2026-01-13 08:49:50,641 | INFO     | chi2: 2.8184891000635424
[2026-01-13 03:50:44] 2026-01-13 08:49:50,641 | INFO     | current chi2=2.8184891000635424 (change=2.1200056953304984 %)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,641 | INFO     | right removable region: 1399
[2026-01-13 03:50:44] 2026-01-13 08:49:50,642 | INFO     | sum of square deviations: 860016698136.4814
[2026-01-13 03:50:44] 2026-01-13 08:49:50,680 | INFO     | sum of deviations: 3380643855293.748
[2026-01-13 03:50:44] 2026-01-13 08:49:50,680 | INFO     | mean x: 1768251332.569395
[2026-01-13 03:50:44] 2026-01-13 08:49:50,680 | INFO     | mean y: 3463896.4078291813
[2026-01-13 03:50:44] 2026-01-13 08:49:50,680 | INFO     | intersect: -6947363936.375771
[2026-01-13 03:50:44] 2026-01-13 08:49:50,681 | INFO     | chi2: 4.419172943056615
[2026-01-13 03:50:44] 2026-01-13 08:49:50,681 | INFO     | current chi2=4.419172943056615 (change=35.594344925854635 %)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,683 | INFO     | sum of square deviations: 850867665290.2795
[2026-01-13 03:50:44] 2026-01-13 08:49:50,720 | INFO     | sum of deviations: 3261581203296.274
[2026-01-13 03:50:44] 2026-01-13 08:49:50,720 | INFO     | mean x: 1768251485.0692856
[2026-01-13 03:50:44] 2026-01-13 08:49:50,720 | INFO     | mean y: 3465880.6157142855
[2026-01-13 03:50:44] 2026-01-13 08:49:50,720 | INFO     | intersect: -6774669006.476452
[2026-01-13 03:50:44] 2026-01-13 08:49:50,721 | INFO     | chi2: 4.354924943937064
[2026-01-13 03:50:44] 2026-01-13 08:49:50,721 | INFO     | current chi2=4.354924943937064 (change=1.4538466800783791 %)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,721 | INFO     | left removable region: 20
[2026-01-13 03:50:44] 2026-01-13 08:49:50,723 | INFO     | sum of square deviations: 813150433508.9811
[2026-01-13 03:50:44] 2026-01-13 08:49:50,760 | INFO     | sum of deviations: 3758488596763.552
[2026-01-13 03:50:44] 2026-01-13 08:49:50,761 | INFO     | mean x: 1768251454.5750544
[2026-01-13 03:50:44] 2026-01-13 08:49:50,761 | INFO     | mean y: 3479986.4053662075
[2026-01-13 03:50:44] 2026-01-13 08:49:50,761 | INFO     | intersect: -8169611552.821493
[2026-01-13 03:50:44] 2026-01-13 08:49:50,762 | INFO     | chi2: 0.2511708666047511
[2026-01-13 03:50:44] 2026-01-13 08:49:50,762 | INFO     | current memory leak: 4.62 B/s (using 1379 data points, chi2=0.25)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,763 | INFO     | could have reported an average CPU frequency of 2606 MHz (50 samples)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,763 | INFO     | ..............................
[2026-01-13 03:50:44] 2026-01-13 08:49:50,763 | INFO     | . Timing measurements:
[2026-01-13 03:50:44] 2026-01-13 08:49:50,763 | INFO     | . get job = 0 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . initial setup = 2 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . payload setup = 8 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . stage-in = 0 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . payload execution = 85972 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . stage-out = 4 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | . log creation = 0 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,764 | INFO     | ..............................
[2026-01-13 03:50:44] 2026-01-13 08:49:50,845 | INFO     | 
[2026-01-13 03:50:44] 2026-01-13 08:49:50,845 | INFO     | job summary report
[2026-01-13 03:50:44] 2026-01-13 08:49:50,845 | INFO     | --------------------------------------------------
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | PanDA job id: 6966860478
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | task id: 48187943
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | errors: (none)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | pilot state: finished 
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | transexitcode: 0
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | exeerrorcode: 0
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | exeerrordiag: 
[2026-01-13 03:50:44] 2026-01-13 08:49:50,846 | INFO     | exitcode: 0
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | exitmsg: OK
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | cpuconsumptiontime: 669484 s
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | nevents: 2050
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | neventsw: 0
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | pid: 3657
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | pgrp: 3657
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | corecount: 8
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | event service: False
[2026-01-13 03:50:44] 2026-01-13 08:49:50,847 | INFO     | sizes: {0: 2284450, 1: 2284649, 4: 2284911, 12: 2284939, 85984: 2368227, 85985: 2368226, 85989: 2377408, 85992: 2377464, 85999: 2377710}
[2026-01-13 03:50:44] 2026-01-13 08:49:50,848 | INFO     | --------------------------------------------------
[2026-01-13 03:50:44] 2026-01-13 08:49:50,848 | INFO     | 
[2026-01-13 03:50:44] 2026-01-13 08:49:50,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 03:50:44] 2026-01-13 08:49:50,875 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,875 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,875 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,875 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | job 6966860478 has completed (purged errors)
[2026-01-13 03:50:44] 2026-01-13 08:49:50,878 | INFO     | overall cleanup function is called
[2026-01-13 03:50:44] 2026-01-13 08:49:51,892 | INFO     | --- collectZombieJob: --- 10, [3657]
[2026-01-13 03:50:44] 2026-01-13 08:49:51,893 | INFO     | zombie collector waiting for pid 3657
[2026-01-13 03:50:44] 2026-01-13 08:49:51,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 03:50:44] 2026-01-13 08:49:51,893 | INFO     | collected zombie processes
[2026-01-13 03:50:44] 2026-01-13 08:49:51,893 | INFO     | will attempt to kill all subprocesses of pid=3657
[2026-01-13 03:50:44] 2026-01-13 08:49:51,992 | INFO     | process IDs to be killed: [3657] (in reverse order)
[2026-01-13 03:50:44] 2026-01-13 08:49:52,048 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 03:50:44] 2026-01-13 08:49:52,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 03:50:44] 2026-01-13 08:49:52,053 | INFO     | did not find any defunct processes belonging to 3657
[2026-01-13 03:50:44] 2026-01-13 08:49:52,057 | INFO     | did not find any defunct processes belonging to 3657
[2026-01-13 03:50:44] 2026-01-13 08:49:52,057 | INFO     | ready for new job
[2026-01-13 03:50:44] 2026-01-13 08:49:52,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 03:50:44] 2026-01-13 08:49:52,062 | INFO     | ***************************************
[2026-01-13 03:50:44] 2026-01-13 08:49:52,062 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 03:50:44] 2026-01-13 08:49:52,062 | INFO     | ***************************************
[2026-01-13 03:50:44] 2026-01-13 08:49:52,062 | INFO     | 
[2026-01-13 03:50:44] 2026-01-13 08:49:52,063 | INFO     | architecture information:
[2026-01-13 03:50:44] 2026-01-13 08:49:52,064 | INFO     | executing command: cat /etc/os-release
[2026-01-13 03:50:44] 2026-01-13 08:49:52,081 | INFO     | cat /etc/os-release:
[2026-01-13 03:50:44] NAME="CentOS Linux"
[2026-01-13 03:50:44] VERSION="7 (Core)"
[2026-01-13 03:50:44] ID="centos"
[2026-01-13 03:50:44] ID_LIKE="rhel fedora"
[2026-01-13 03:50:44] VERSION_ID="7"
[2026-01-13 03:50:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 03:50:44] ANSI_COLOR="0;31"
[2026-01-13 03:50:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 03:50:44] HOME_URL="https://www.centos.org/"
[2026-01-13 03:50:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 03:50:44] 
[2026-01-13 03:50:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 03:50:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 03:50:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 03:50:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 03:50:44] 
[2026-01-13 03:50:44] 2026-01-13 08:49:52,081 | INFO     | ***************************************
[2026-01-13 03:50:44] 2026-01-13 08:49:52,584 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 03:50:44] 2026-01-13 08:49:52,602 | INFO     | sufficient remaining disk space (28218228736 B)
[2026-01-13 03:50:44] 2026-01-13 08:49:52,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 03:50:44] 2026-01-13 08:49:52,602 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 03:50:44] 2026-01-13 08:49:52,603 | INFO     | update_server=False
[2026-01-13 03:50:44] 2026-01-13 08:49:52,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 03:50:44] 2026-01-13 08:49:52,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:50:44] 2026-01-13 08:49:52,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 03:50:44] 2026-01-13 08:49:52,724 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 03:50:44] 2026-01-13 08:49:52,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 03:50:44] 2026-01-13 08:49:52,728 | INFO     | will abort loop
[2026-01-13 03:50:44] 2026-01-13 08:49:53,045 | INFO     | all payload control threads have been joined
[2026-01-13 03:50:44] 2026-01-13 08:49:53,465 | INFO     | all data control threads have been joined
[2026-01-13 03:50:44] 2026-01-13 08:49:53,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 03:50:44] 2026-01-13 08:49:53,608 | INFO     | [job] retrieve thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,609 | INFO     | [job] queue monitor thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,683 | INFO     | [data] copytool_in thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,734 | INFO     | [job] job monitor thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,923 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,924 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:53,926 | INFO     | [job] validate thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:54,050 | INFO     | [payload] control thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:54,212 | INFO     | all job control threads have been joined
[2026-01-13 03:50:44] 2026-01-13 08:49:54,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 03:50:44] 2026-01-13 08:49:54,471 | INFO     | [data] control thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:54,509 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:54,757 | INFO     | [payload] failed_post thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:54,947 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:55,116 | INFO     | [payload] validate_post thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:55,217 | INFO     | [job] control thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:55,612 | INFO     | [data] copytool_out thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:49:58,361 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 03:50:44] 2026-01-13 08:50:22,197 | INFO     | PID=28906 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 03:50:44] 2026-01-13 08:50:22,198 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 03:50:44] 2026-01-13 08:50:22,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 03:50:44] 2026-01-13 08:50:22,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 03:50:44] 2026-01-13 08:50:37,525 | INFO     | [monitor] cgroup control has ended
[2026-01-13 03:50:44] 2026-01-13 08:50:39,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634134779712)>', '<ExcThread(monitor, started 139633841121024)>']
[2026-01-13 03:50:44] 2026-01-13 08:50:40,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 03:50:44] 2026-01-13 08:50:40,280 | INFO     | [monitor] control thread has ended
[2026-01-13 03:50:44] 2026-01-13 08:50:44,483 | INFO     | all workflow threads have been joined
[2026-01-13 03:50:44] 2026-01-13 08:50:44,483 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 03:50:44] 2026-01-13 08:50:44,484 | INFO     | traces error code: 0
[2026-01-13 03:50:44] 2026-01-13 08:50:44,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 03:50:44] 2026-01-13 08:50:44,566 [wrapper] ==== pilot stdout END ====
[2026-01-13 03:50:44] 2026-01-13 08:50:44,570 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 03:50:44] 2026-01-13 08:50:44,573 [wrapper] pilotpid: 28906
[2026-01-13 03:50:44] 2026-01-13 08:50:44,578 [wrapper] Pilot exit status: 0
[2026-01-13 03:50:44] 2026-01-13 08:50:44,590 [wrapper] pandaids: 6966860478
[2026-01-13 03:50:44] 2026-01-13 08:50:44,635 [wrapper] cleanup supervisor_pilot  4386 28907
[2026-01-13 03:50:44] 2026-01-13 08:50:44,638 [wrapper] Test setup, not cleaning
[2026-01-13 03:50:44] 2026-01-13 08:50:44,642 [wrapper] apfmon messages muted
[2026-01-13 03:50:44] 2026-01-13 08:50:44,646 [wrapper] ==== wrapper stdout END ====
[2026-01-13 03:50:44] 2026-01-13 08:50:44,650 [wrapper] ==== wrapper stderr END ====
[2026-01-13 03:50:44]  *** Error codes and diagnostics ***
[2026-01-13 03:50:44]     "exeErrorCode": 0,
[2026-01-13 03:50:44]     "exeErrorDiag": "",
[2026-01-13 03:50:44]     "pilotErrorCode": 0,
[2026-01-13 03:50:44]     "pilotErrorDiag": "",
[2026-01-13 03:50:44]  *** Listing of results directory ***
[2026-01-13 03:50:44] total 1536224
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:53 queuedata.json
[2026-01-13 03:50:44] -rwx------ 1 boincer umatlas      36322 Jan 12 03:54 runpilot2-wrapper.sh
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas        100 Jan 12 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 03:50:44] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 03:56 run_atlas
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas        105 Jan 12 03:56 job.xml
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas  323766841 Jan 12 03:56 EVNT.48118027._000171.pool.root.1
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:56 start_atlas.sh
[2026-01-13 03:50:44] drwxrwx--x 2 boincer umatlas       4096 Jan 12 03:56 shared
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas     592611 Jan 12 03:56 input.tar.gz
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas          0 Jan 12 03:56 boinc_lockfile
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas       2896 Jan 12 03:56 pandaJob.out
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas         57 Jan 12 03:56 setup.sh.local
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas     987688 Jan 12 03:56 agis_schedconf.cvmfs.json
[2026-01-13 03:50:44] drwx------ 5 boincer umatlas       4096 Jan 12 03:56 pilot3
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas        533 Jan 13 03:41 boinc_task_state.xml
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas 1215878005 Jan 13 03:49 HITS.48187943._000833.pool.root.1
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas       5951 Jan 13 03:49 init_data.xml
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas       1065 Jan 13 03:49 memory_monitor_summary.json
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas    1516240 Jan 13 03:49 agis_ddmendpoints.agis.ALL.json
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas    2868095 Jan 13 03:49 log.48187943._000833.job.log.tgz.1
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas      27564 Jan 13 03:49 heartbeat.json
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas         29 Jan 13 03:50 wrapper_checkpoint.txt
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas       8192 Jan 13 03:50 boinc_mmap_file
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas         95 Jan 13 03:50 pilot_heartbeat.json
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas       4932 Jan 13 03:50 pilotlog.txt
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas   11877844 Jan 13 03:50 log.48187943._000833.job.log.1
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas        353 Jan 13 03:50 output.list
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas        620 Jan 13 03:50 runtime_log
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas   14786560 Jan 13 03:50 result.tar.gz
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas       9343 Jan 13 03:50 runtime_log.err
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas        669 Jan 13 03:50 6deKDmBsSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWmhKDmQRxZCn.diag
[2026-01-13 03:50:44] -rw-r--r-- 1 boincer umatlas      21217 Jan 13 03:50 stderr.txt
[2026-01-13 03:50:44] HITS file was successfully produced:
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas 1215878005 Jan 13 03:49 shared/HITS.pool.root.1
[2026-01-13 03:50:44]  *** Contents of shared directory: ***
[2026-01-13 03:50:44] total 1518604
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas  323766841 Jan 12 03:56 ATLAS.root_0
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:56 start_atlas.sh
[2026-01-13 03:50:44] -rw-r--r-- 2 boincer umatlas     592611 Jan 12 03:56 input.tar.gz
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas 1215878005 Jan 13 03:49 HITS.pool.root.1
[2026-01-13 03:50:44] -rw------- 1 boincer umatlas   14786560 Jan 13 03:50 result.tar.gz
03:50:46 (24975): run_atlas exited; CPU time 667187.422188
03:50:46 (24975): called boinc_finish(0)

</stderr_txt>
]]>

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