Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:09 (3255240): wrapper (7.7.26015): starting
02:09:09 (3255240): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 02:09:09] Arguments: --nthreads 4
[2026-01-13 02:09:09] Threads: 4
[2026-01-13 02:09:09] Checking for CVMFS
[2026-01-13 02:09:09] No cvmfs_config command found, will try listing directly
[2026-01-13 02:09:09] CVMFS is ok
[2026-01-13 02:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 02:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 02:09:09] Further information can be found at the LHC@home message board.
[2026-01-13 02:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 02:09:09] Checking for apptainer binary...
[2026-01-13 02:09:09] which: no apptainer in ((null))
[2026-01-13 02:09:09] apptainer is not installed, using version from CVMFS
[2026-01-13 02:09:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 02:09:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-13 02:09:10] apptainer works
[2026-01-13 02:09:10] Set ATHENA_PROC_NUMBER=4
[2026-01-13 02:09:10] Set ATHENA_CORE_NUMBER=4
[2026-01-13 02:09:10] Starting ATLAS job with PandaID=6966860473
[2026-01-13 02:09:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 17:42:46]  *** The last 200 lines of the pilot log: ***
[2026-01-13 17:42:46] 2026-01-13 16:40:55,318 | INFO     | .. there are 5 such processes running
[2026-01-13 17:42:46] 2026-01-13 16:40:56,318 | INFO     | time since job start (55894s) is within the limit (349056.0s)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,707 | INFO     | monitor loop #3850: job 0:6966860473 is in state 'finished'
[2026-01-13 17:42:46] 2026-01-13 16:40:57,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,756 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 17:42:46] 2026-01-13 16:40:57,775 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2733.92328125
[2026-01-13 17:42:46] 2026-01-13 16:40:57,797 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6966860473/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,798 | INFO     | extracted standard info from prmon json
[2026-01-13 17:42:46] 2026-01-13 16:40:57,798 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 17:42:46] 2026-01-13 16:40:57,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 17:42:46] 2026-01-13 16:40:57,811 | INFO     | fitting pss+swap vs Time
[2026-01-13 17:42:46] 2026-01-13 16:40:57,813 | INFO     | sum of square deviations: 238322105665.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,829 | INFO     | sum of deviations: 917277276369.5005
[2026-01-13 17:42:46] 2026-01-13 16:40:57,830 | INFO     | mean x: 1768294507.5
[2026-01-13 17:42:46] 2026-01-13 16:40:57,830 | INFO     | mean y: 2737707.575327511
[2026-01-13 17:42:46] 2026-01-13 16:40:57,830 | INFO     | intersect: -6803246005.655
[2026-01-13 17:42:46] 2026-01-13 16:40:57,831 | INFO     | chi2: 4.375418895329521
[2026-01-13 17:42:46] 2026-01-13 16:40:57,832 | INFO     | sum of square deviations: 234440711960.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,849 | INFO     | sum of deviations: 1146232800772.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,849 | INFO     | mean x: 1768294355.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,849 | INFO     | mean y: 2746697.6256860592
[2026-01-13 17:42:46] 2026-01-13 16:40:57,849 | INFO     | intersect: -8642837826.391586
[2026-01-13 17:42:46] 2026-01-13 16:40:57,850 | INFO     | chi2: 2.3057749424025573
[2026-01-13 17:42:46] 2026-01-13 16:40:57,850 | INFO     | current chi2=2.3057749424025573 (change=47.30161848357368 %)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,851 | INFO     | sum of square deviations: 230601691142.5
[2026-01-13 17:42:46] 2026-01-13 16:40:57,868 | INFO     | sum of deviations: 1136256651816.4998
[2026-01-13 17:42:46] 2026-01-13 16:40:57,868 | INFO     | mean x: 1768294202.5
[2026-01-13 17:42:46] 2026-01-13 16:40:57,868 | INFO     | mean y: 2746300.2880794704
[2026-01-13 17:42:46] 2026-01-13 16:40:57,868 | INFO     | intersect: -8710268942.594822
[2026-01-13 17:42:46] 2026-01-13 16:40:57,869 | INFO     | chi2: 2.299795438370629
[2026-01-13 17:42:46] 2026-01-13 16:40:57,869 | INFO     | current chi2=2.299795438370629 (change=0.25932730562583284 %)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,869 | INFO     | right removable region: 905
[2026-01-13 17:42:46] 2026-01-13 16:40:57,870 | INFO     | sum of square deviations: 234440711960.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,888 | INFO     | sum of deviations: 695060173636.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,888 | INFO     | mean x: 1768294660.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,888 | INFO     | mean y: 2746422.807903403
[2026-01-13 17:42:46] 2026-01-13 16:40:57,888 | INFO     | intersect: -5239820805.144016
[2026-01-13 17:42:46] 2026-01-13 16:40:57,889 | INFO     | chi2: 2.1440654881538994
[2026-01-13 17:42:46] 2026-01-13 16:40:57,889 | INFO     | current chi2=2.1440654881538994 (change=50.99748071110285 %)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,890 | INFO     | sum of square deviations: 230601691142.5
[2026-01-13 17:42:46] 2026-01-13 16:40:57,907 | INFO     | sum of deviations: 671312314113.4999
[2026-01-13 17:42:46] 2026-01-13 16:40:57,908 | INFO     | mean x: 1768294812.5
[2026-01-13 17:42:46] 2026-01-13 16:40:57,908 | INFO     | mean y: 2747366.4381898455
[2026-01-13 17:42:46] 2026-01-13 16:40:57,908 | INFO     | intersect: -5144994945.133667
[2026-01-13 17:42:46] 2026-01-13 16:40:57,909 | INFO     | chi2: 2.1380357547277877
[2026-01-13 17:42:46] 2026-01-13 16:40:57,909 | INFO     | current chi2=2.1380357547277877 (change=0.2812289764200931 %)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,909 | INFO     | left removable region: 20
[2026-01-13 17:42:46] 2026-01-13 16:40:57,910 | INFO     | sum of square deviations: 214935267170.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,926 | INFO     | sum of deviations: 854677377733.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,926 | INFO     | mean x: 1768294782.0
[2026-01-13 17:42:46] 2026-01-13 16:40:57,926 | INFO     | mean y: 2757415.30960452
[2026-01-13 17:42:46] 2026-01-13 16:40:57,926 | INFO     | intersect: -7028762200.981883
[2026-01-13 17:42:46] 2026-01-13 16:40:57,927 | INFO     | chi2: 0.04564000534700715
[2026-01-13 17:42:46] 2026-01-13 16:40:57,927 | INFO     | current memory leak: 3.98 B/s (using 885 data points, chi2=0.05)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,928 | INFO     | could have reported an average CPU frequency of 2723 MHz (34 samples)
[2026-01-13 17:42:46] 2026-01-13 16:40:57,928 | INFO     | ..............................
[2026-01-13 17:42:46] 2026-01-13 16:40:57,928 | INFO     | . Timing measurements:
[2026-01-13 17:42:46] 2026-01-13 16:40:57,928 | INFO     | . get job = 0 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,928 | INFO     | . initial setup = 1 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | . payload setup = 12 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | . stage-in = 0 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | . payload execution = 55852 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | . stage-out = 2 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | . log creation = 0 s
[2026-01-13 17:42:46] 2026-01-13 16:40:57,929 | INFO     | ..............................
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | 
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | job summary report
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | --------------------------------------------------
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | PanDA job id: 6966860473
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | task id: 48187943
[2026-01-13 17:42:46] 2026-01-13 16:40:58,015 | INFO     | errors: (none)
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | pilot state: finished 
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | transexitcode: 0
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | exeerrorcode: 0
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | exeerrordiag: 
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | exitcode: 0
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | exitmsg: OK
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | cpuconsumptiontime: 221779 s
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | nevents: 2050
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | neventsw: 0
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | pid: 3270117
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | pgrp: 3270117
[2026-01-13 17:42:46] 2026-01-13 16:40:58,016 | INFO     | corecount: 4
[2026-01-13 17:42:46] 2026-01-13 16:40:58,017 | INFO     | event service: False
[2026-01-13 17:42:46] 2026-01-13 16:40:58,017 | INFO     | sizes: {0: 2284462, 1: 2284661, 7: 2284923, 11: 2284951, 55869: 2357466, 55872: 2366672, 55878: 2366862}
[2026-01-13 17:42:46] 2026-01-13 16:40:58,017 | INFO     | --------------------------------------------------
[2026-01-13 17:42:46] 2026-01-13 16:40:58,017 | INFO     | 
[2026-01-13 17:42:46] 2026-01-13 16:40:58,017 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2026-01-13 17:42:46] 2026-01-13 16:40:58,046 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,046 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,046 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,046 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | job 6966860473 has completed (purged errors)
[2026-01-13 17:42:46] 2026-01-13 16:40:58,048 | INFO     | overall cleanup function is called
[2026-01-13 17:42:46] 2026-01-13 16:40:59,066 | INFO     | --- collectZombieJob: --- 10, [3270117]
[2026-01-13 17:42:46] 2026-01-13 16:40:59,066 | INFO     | zombie collector waiting for pid 3270117
[2026-01-13 17:42:46] 2026-01-13 16:40:59,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 17:42:46] 2026-01-13 16:40:59,067 | INFO     | collected zombie processes
[2026-01-13 17:42:46] 2026-01-13 16:40:59,067 | INFO     | will attempt to kill all subprocesses of pid=3270117
[2026-01-13 17:42:46] 2026-01-13 16:40:59,759 | INFO     | process IDs to be killed: [3270117] (in reverse order)
[2026-01-13 17:42:46] 2026-01-13 16:40:59,971 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 17:42:46] 2026-01-13 16:40:59,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 17:42:46] 2026-01-13 16:41:00,001 | INFO     | did not find any defunct processes belonging to 3270117
[2026-01-13 17:42:46] 2026-01-13 16:41:00,029 | INFO     | did not find any defunct processes belonging to 3270117
[2026-01-13 17:42:46] 2026-01-13 16:41:00,029 | INFO     | ready for new job
[2026-01-13 17:42:46] 2026-01-13 16:41:00,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 17:42:46] 2026-01-13 16:41:00,036 | INFO     | ***************************************
[2026-01-13 17:42:46] 2026-01-13 16:41:00,036 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 17:42:46] 2026-01-13 16:41:00,036 | INFO     | ***************************************
[2026-01-13 17:42:46] 2026-01-13 16:41:00,036 | INFO     | 
[2026-01-13 17:42:46] 2026-01-13 16:41:00,044 | INFO     | architecture information:
[2026-01-13 17:42:46] 2026-01-13 16:41:00,045 | INFO     | executing command: cat /etc/os-release
[2026-01-13 17:42:46] 2026-01-13 16:41:00,065 | INFO     | cat /etc/os-release:
[2026-01-13 17:42:46] NAME="CentOS Linux"
[2026-01-13 17:42:46] VERSION="7 (Core)"
[2026-01-13 17:42:46] ID="centos"
[2026-01-13 17:42:46] ID_LIKE="rhel fedora"
[2026-01-13 17:42:46] VERSION_ID="7"
[2026-01-13 17:42:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 17:42:46] ANSI_COLOR="0;31"
[2026-01-13 17:42:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 17:42:46] HOME_URL="https://www.centos.org/"
[2026-01-13 17:42:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 17:42:46] 
[2026-01-13 17:42:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 17:42:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 17:42:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 17:42:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 17:42:46] 
[2026-01-13 17:42:46] 2026-01-13 16:41:00,066 | INFO     | ***************************************
[2026-01-13 17:42:46] 2026-01-13 16:41:00,569 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2026-01-13 17:42:46] 2026-01-13 16:41:00,591 | INFO     | sufficient remaining disk space (3364988387328 B)
[2026-01-13 17:42:46] 2026-01-13 16:41:00,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 17:42:46] 2026-01-13 16:41:00,592 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 17:42:46] 2026-01-13 16:41:00,592 | INFO     | update_server=False
[2026-01-13 17:42:46] 2026-01-13 16:41:00,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 17:42:46] 2026-01-13 16:41:00,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 17:42:46] 2026-01-13 16:41:00,937 | INFO     | all data control threads have been joined
[2026-01-13 17:42:46] 2026-01-13 16:41:01,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 17:42:46] 2026-01-13 16:41:01,216 | INFO     | aborting loop
[2026-01-13 17:42:46] 2026-01-13 16:41:01,600 | INFO     | [job] retrieve thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:01,869 | INFO     | all job control threads have been joined
[2026-01-13 17:42:46] 2026-01-13 16:41:01,881 | INFO     | all payload control threads have been joined
[2026-01-13 17:42:46] 2026-01-13 16:41:01,910 | INFO     | [job] validate thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:01,911 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:01,943 | INFO     | [data] control thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,152 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,222 | INFO     | [job] job monitor thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,310 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,598 | INFO     | [data] copytool_out thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 17:42:46] 2026-01-13 16:41:02,633 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,693 | INFO     | [data] copytool_in thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,791 | INFO     | [payload] validate_post thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,874 | INFO     | [job] control thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:02,889 | INFO     | [payload] control thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:03,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 17:42:46] 2026-01-13 16:41:03,104 | INFO     | [payload] failed_post thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:04,031 | INFO     | [job] queue monitor thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:06,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 17:42:46] 2026-01-13 16:41:30,264 | INFO     | PID=3261557 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 17:42:46] 2026-01-13 16:41:30,266 | INFO     | .. there are 5 such processes running
[2026-01-13 17:42:46] 2026-01-13 16:41:30,267 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 17:42:46] 2026-01-13 16:41:30,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 17:42:46] 2026-01-13 16:41:30,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 17:42:46] 2026-01-13 16:41:46,795 | INFO     | [monitor] cgroup control has ended
[2026-01-13 17:42:46] 2026-01-13 16:41:47,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23223608911680)>', '<ExcThread(monitor, started 23223366276864)>']
[2026-01-13 17:42:46] 2026-01-13 16:41:48,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 17:42:46] 2026-01-13 16:41:48,353 | INFO     | [monitor] control thread has ended
[2026-01-13 17:42:46] 2026-01-13 16:41:52,438 | INFO     | all workflow threads have been joined
[2026-01-13 17:42:46] 2026-01-13 16:41:52,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 17:42:46] 2026-01-13 16:41:52,439 | INFO     | traces error code: 0
[2026-01-13 17:42:46] 2026-01-13 16:41:52,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 17:42:46] 2026-01-13 16:41:52,570 [wrapper] ==== pilot stdout END ====
[2026-01-13 17:42:46] 2026-01-13 16:41:52,574 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 17:42:46] 2026-01-13 16:41:52,578 [wrapper] pilotpid: 3261557
[2026-01-13 17:42:46] 2026-01-13 16:41:52,582 [wrapper] Pilot exit status: 0
[2026-01-13 17:42:46] 2026-01-13 16:41:52,595 [wrapper] pandaids: 6966860473
[2026-01-13 17:42:46] 2026-01-13 16:41:52,759 [wrapper] cleanup supervisor_pilot  396305 3261558
[2026-01-13 17:42:46] 2026-01-13 16:41:52,763 [wrapper] Test setup, not cleaning
[2026-01-13 17:42:46] 2026-01-13 16:41:52,767 [wrapper] apfmon messages muted
[2026-01-13 17:42:46] 2026-01-13 16:41:52,770 [wrapper] ==== wrapper stdout END ====
[2026-01-13 17:42:46] 2026-01-13 16:41:52,774 [wrapper] ==== wrapper stderr END ====
[2026-01-13 17:42:46]  *** Error codes and diagnostics ***
[2026-01-13 17:42:46]     "exeErrorCode": 0,
[2026-01-13 17:42:46]     "exeErrorDiag": "",
[2026-01-13 17:42:46]     "pilotErrorCode": 0,
[2026-01-13 17:42:46]     "pilotErrorDiag": "",
[2026-01-13 17:42:46]  *** Listing of results directory ***
[2026-01-13 17:42:46] total 1485520
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc     579449 Jan 12 09:50 pilot3.tar.gz
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc       5112 Jan 12 09:53 queuedata.json
[2026-01-13 17:42:46] -rwx------ 1 boinc boinc      36322 Jan 12 09:54 runpilot2-wrapper.sh
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc        100 Jan 13 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 17:42:46] -rwxr-xr-x 1 boinc boinc       7986 Jan 13 02:09 run_atlas
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc        105 Jan 13 02:09 job.xml
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc       6692 Jan 13 02:09 init_data.xml
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc  323575656 Jan 13 02:09 EVNT.48118027._000170.pool.root.1
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc      15847 Jan 13 02:09 start_atlas.sh
[2026-01-13 17:42:46] drwxrwx--x 2 boinc boinc       4096 Jan 13 02:09 shared
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc     592608 Jan 13 02:09 input.tar.gz
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc          0 Jan 13 02:09 boinc_lockfile
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc       2896 Jan 13 02:09 pandaJob.out
[2026-01-13 17:42:46] -rw------- 1 boinc boinc     987763 Jan 13 02:09 agis_schedconf.cvmfs.json
[2026-01-13 17:42:46] drwx------ 5 boinc boinc       4096 Jan 13 02:09 pilot3
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc        532 Jan 13 17:35 boinc_task_state.xml
[2026-01-13 17:42:46] -rw------- 1 boinc boinc 1174284208 Jan 13 17:40 HITS.48187943._000828.pool.root.1
[2026-01-13 17:42:46] -rw------- 1 boinc boinc       1038 Jan 13 17:40 memory_monitor_summary.json
[2026-01-13 17:42:46] -rw------- 1 boinc boinc    1516246 Jan 13 17:40 agis_ddmendpoints.agis.ALL.json
[2026-01-13 17:42:46] -rw------- 1 boinc boinc    1910163 Jan 13 17:40 log.48187943._000828.job.log.tgz.1
[2026-01-13 17:42:46] -rw------- 1 boinc boinc      27751 Jan 13 17:40 heartbeat.json
[2026-01-13 17:42:46] -rw------- 1 boinc boinc         95 Jan 13 17:41 pilot_heartbeat.json
[2026-01-13 17:42:46] -rw------- 1 boinc boinc       4835 Jan 13 17:41 pilotlog.txt
[2026-01-13 17:42:46] -rw------- 1 boinc boinc    7769821 Jan 13 17:41 log.48187943._000828.job.log.1
[2026-01-13 17:42:46] -rw------- 1 boinc boinc        353 Jan 13 17:41 output.list
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc        620 Jan 13 17:41 runtime_log
[2026-01-13 17:42:46] -rw------- 1 boinc boinc    9717760 Jan 13 17:41 result.tar.gz
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc       9223 Jan 13 17:41 runtime_log.err
[2026-01-13 17:42:46] -rw------- 1 boinc boinc        670 Jan 13 17:41 jrVKDmBsSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSmhKDmHswpyn.diag
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc         28 Jan 13 17:42 wrapper_checkpoint.txt
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc       8192 Jan 13 17:42 boinc_mmap_file
[2026-01-13 17:42:46] -rw-r--r-- 1 boinc boinc      20916 Jan 13 17:42 stderr.txt
[2026-01-13 17:42:46] HITS file was successfully produced:
[2026-01-13 17:42:46] -rw------- 1 boinc boinc 1174284208 Jan 13 17:40 shared/HITS.pool.root.1
[2026-01-13 17:42:46]  *** Contents of shared directory: ***
[2026-01-13 17:42:46] total 1472852
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc  323575656 Jan 13 02:09 ATLAS.root_0
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc      15847 Jan 13 02:09 start_atlas.sh
[2026-01-13 17:42:46] -rw-r--r-- 2 boinc boinc     592608 Jan 13 02:09 input.tar.gz
[2026-01-13 17:42:46] -rw------- 1 boinc boinc 1174284208 Jan 13 17:40 HITS.pool.root.1
[2026-01-13 17:42:46] -rw------- 1 boinc boinc    9717760 Jan 13 17:41 result.tar.gz
17:42:47 (3255240): run_atlas exited; CPU time 224284.000744
17:42:47 (3255240): called boinc_finish(0)

</stderr_txt>
]]>

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