Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:20 (2597874): wrapper (7.7.26015): starting
03:56:20 (2597874): wrapper: running run_atlas (--nthreads 10)
[2026-01-12 03:56:20] Arguments: --nthreads 10
[2026-01-12 03:56:20] Threads: 10
[2026-01-12 03:56:20] Checking for CVMFS
[2026-01-12 03:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:56:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:56:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:56:20] 2.13.3.0 5666 26980 196928 155045 1 487 31379614 40960001 11677 16776704 0 21356610 99.516 25348826 44001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:56:20] CVMFS is ok
[2026-01-12 03:56:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:56:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:56:20] Further information can be found at the LHC@home message board.
[2026-01-12 03:56:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:56:20] Checking for apptainer binary...
[2026-01-12 03:56:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:56:20] Running /usr/bin/apptainer --version
[2026-01-12 03:56:20] apptainer version 1.4.5-2.el9
[2026-01-12 03:56:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:56:20] c-210-33-2.aglt2.org
[2026-01-12 03:56:20] apptainer works
[2026-01-12 03:56:20] Set ATHENA_PROC_NUMBER=10
[2026-01-12 03:56:20] Set ATHENA_CORE_NUMBER=10
[2026-01-12 03:56:20] Starting ATLAS job with PandaID=6966860853
[2026-01-12 03:56:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 12:17:04]  *** The last 200 lines of the pilot log: ***
[2026-01-13 12:17:04] 2026-01-13 17:16:03,913 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2985.870517857143
[2026-01-13 12:17:04] 2026-01-13 17:16:03,922 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966860853/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 12:17:04] 2026-01-13 17:16:03,923 | INFO     | extracted standard info from prmon json
[2026-01-13 12:17:04] 2026-01-13 17:16:03,923 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 12:17:04] 2026-01-13 17:16:03,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 12:17:04] 2026-01-13 17:16:03,952 | INFO     | fitting pss+swap vs Time
[2026-01-13 12:17:04] 2026-01-13 17:16:03,955 | INFO     | sum of square deviations: 2153944748420.003
[2026-01-13 12:17:04] 2026-01-13 17:16:04,015 | INFO     | sum of deviations: 14857524549060.5
[2026-01-13 12:17:04] 2026-01-13 17:16:04,016 | INFO     | mean x: 1768266388.3810272
[2026-01-13 12:17:04] 2026-01-13 17:16:04,016 | INFO     | mean y: 3871502.643081761
[2026-01-13 12:17:04] 2026-01-13 17:16:04,016 | INFO     | intersect: -12193312893.066778
[2026-01-13 12:17:04] 2026-01-13 17:16:04,018 | INFO     | chi2: 8.008809287265953
[2026-01-13 12:17:04] 2026-01-13 17:16:04,020 | INFO     | sum of square deviations: 2137059798186.6072
[2026-01-13 12:17:04] 2026-01-13 17:16:04,079 | INFO     | sum of deviations: 15790552385026.566
[2026-01-13 12:17:04] 2026-01-13 17:16:04,079 | INFO     | mean x: 1768266235.8964791
[2026-01-13 12:17:04] 2026-01-13 17:16:04,080 | INFO     | mean y: 3879928.068838676
[2026-01-13 12:17:04] 2026-01-13 17:16:04,080 | INFO     | intersect: -13061688313.067936
[2026-01-13 12:17:04] 2026-01-13 17:16:04,082 | INFO     | chi2: 4.3749221141373305
[2026-01-13 12:17:04] 2026-01-13 17:16:04,082 | INFO     | current chi2=4.3749221141373305 (change=45.37362600089031 %)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,084 | INFO     | sum of square deviations: 2120263361239.8052
[2026-01-13 12:17:04] 2026-01-13 17:16:04,140 | INFO     | sum of deviations: 16034910236780.842
[2026-01-13 12:17:04] 2026-01-13 17:16:04,141 | INFO     | mean x: 1768266083.4120126
[2026-01-13 12:17:04] 2026-01-13 17:16:04,142 | INFO     | mean y: 3882143.4452054794
[2026-01-13 12:17:04] 2026-01-13 17:16:04,142 | INFO     | intersect: -13368979190.948605
[2026-01-13 12:17:04] 2026-01-13 17:16:04,143 | INFO     | chi2: 3.7633402276005388
[2026-01-13 12:17:04] 2026-01-13 17:16:04,144 | INFO     | current chi2=3.7633402276005388 (change=13.979263415010223 %)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,144 | INFO     | right removable region: 1897
[2026-01-13 12:17:04] 2026-01-13 17:16:04,145 | INFO     | sum of square deviations: 2137052953376.609
[2026-01-13 12:17:04] 2026-01-13 17:16:04,179 | INFO     | time since job start (116374s) is within the limit (349056.0s)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,190 | INFO     | monitor loop #7077: job 0:6966860853 is in state 'finished'
[2026-01-13 12:17:04] 2026-01-13 17:16:04,195 | INFO     | sum of deviations: 14021917081805.71
[2026-01-13 12:17:04] 2026-01-13 17:16:04,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,196 | INFO     | mean x: 1768266540.8964791
[2026-01-13 12:17:04] 2026-01-13 17:16:04,196 | INFO     | mean y: 3879045.013662638
[2026-01-13 12:17:04] 2026-01-13 17:16:04,196 | INFO     | intersect: -11598307403.293943
[2026-01-13 12:17:04] 2026-01-13 17:16:04,197 | INFO     | chi2: 5.335701932961289
[2026-01-13 12:17:04] 2026-01-13 17:16:04,197 | INFO     | current chi2=5.335701932961289 (change=33.377088383849 %)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,199 | INFO     | sum of square deviations: 2120250599622.363
[2026-01-13 12:17:04] 2026-01-13 17:16:04,251 | INFO     | sum of deviations: 13628880957342.75
[2026-01-13 12:17:04] 2026-01-13 17:16:04,251 | INFO     | mean x: 1768266693.4077976
[2026-01-13 12:17:04] 2026-01-13 17:16:04,252 | INFO     | mean y: 3882610.3271865123
[2026-01-13 12:17:04] 2026-01-13 17:16:04,252 | INFO     | intersect: -11362460721.72107
[2026-01-13 12:17:04] 2026-01-13 17:16:04,253 | INFO     | chi2: 4.802158187746371
[2026-01-13 12:17:04] 2026-01-13 17:16:04,254 | INFO     | current chi2=4.802158187746371 (change=9.999504318615562 %)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,254 | INFO     | left removable region: 20
[2026-01-13 12:17:04] 2026-01-13 17:16:04,256 | INFO     | sum of square deviations: 2050655727180.1646
[2026-01-13 12:17:04] 2026-01-13 17:16:04,313 | INFO     | sum of deviations: 14338430911361.875
[2026-01-13 12:17:04] 2026-01-13 17:16:04,313 | INFO     | mean x: 1768266662.9611082
[2026-01-13 12:17:04] 2026-01-13 17:16:04,313 | INFO     | mean y: 3897351.5460841767
[2026-01-13 12:17:04] 2026-01-13 17:16:04,314 | INFO     | intersect: -12360035337.729128
[2026-01-13 12:17:04] 2026-01-13 17:16:04,315 | INFO     | chi2: 0.42521128828295224
[2026-01-13 12:17:04] 2026-01-13 17:16:04,316 | INFO     | current memory leak: 6.99 B/s (using 1877 data points, chi2=0.43)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,317 | INFO     | could have reported an average CPU frequency of 3107 MHz (67 samples)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,317 | INFO     | ..............................
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . Timing measurements:
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . get job = 0 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . initial setup = 2 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . payload setup = 8 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . stage-in = 0 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . payload execution = 116335 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . stage-out = 3 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | . log creation = 1 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,318 | INFO     | ..............................
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | 
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | job summary report
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | --------------------------------------------------
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | PanDA job id: 6966860853
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | task id: 48187943
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | errors: (none)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | pilot state: finished 
[2026-01-13 12:17:04] 2026-01-13 17:16:04,402 | INFO     | transexitcode: 0
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | exeerrorcode: 0
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | exeerrordiag: 
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | exitcode: 0
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | exitmsg: OK
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | cpuconsumptiontime: 276097 s
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | nevents: 2050
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | neventsw: 0
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | pid: 2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | pgrp: 2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | corecount: 10
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | event service: False
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | sizes: {0: 2286983, 3: 2287277, 11: 2287305, 116348: 2386608, 116352: 2394494, 116353: 2394550, 116359: 2394924}
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | --------------------------------------------------
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | 
[2026-01-13 12:17:04] 2026-01-13 17:16:04,403 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 12:17:04] 2026-01-13 17:16:04,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,424 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 12:17:04] 2026-01-13 17:16:04,424 | INFO     | job 6966860853 has completed (purged errors)
[2026-01-13 12:17:04] 2026-01-13 17:16:04,424 | INFO     | overall cleanup function is called
[2026-01-13 12:17:04] 2026-01-13 17:16:05,442 | INFO     | --- collectZombieJob: --- 10, [2608841]
[2026-01-13 12:17:04] 2026-01-13 17:16:05,442 | INFO     | zombie collector waiting for pid 2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:05,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 12:17:04] 2026-01-13 17:16:05,444 | INFO     | collected zombie processes
[2026-01-13 12:17:04] 2026-01-13 17:16:05,444 | INFO     | will attempt to kill all subprocesses of pid=2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:05,638 | INFO     | process IDs to be killed: [2608841] (in reverse order)
[2026-01-13 12:17:04] 2026-01-13 17:16:05,708 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 12:17:04] 2026-01-13 17:16:05,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 12:17:04] 2026-01-13 17:16:05,716 | INFO     | did not find any defunct processes belonging to 2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:05,724 | INFO     | did not find any defunct processes belonging to 2608841
[2026-01-13 12:17:04] 2026-01-13 17:16:05,724 | INFO     | ready for new job
[2026-01-13 12:17:04] 2026-01-13 17:16:05,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 12:17:04] 2026-01-13 17:16:05,731 | INFO     | ***************************************
[2026-01-13 12:17:04] 2026-01-13 17:16:05,732 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 12:17:04] 2026-01-13 17:16:05,732 | INFO     | ***************************************
[2026-01-13 12:17:04] 2026-01-13 17:16:05,732 | INFO     | 
[2026-01-13 12:17:04] 2026-01-13 17:16:05,734 | INFO     | architecture information:
[2026-01-13 12:17:04] 2026-01-13 17:16:05,735 | INFO     | executing command: cat /etc/os-release
[2026-01-13 12:17:04] 2026-01-13 17:16:05,748 | INFO     | cat /etc/os-release:
[2026-01-13 12:17:04] NAME="CentOS Linux"
[2026-01-13 12:17:04] VERSION="7 (Core)"
[2026-01-13 12:17:04] ID="centos"
[2026-01-13 12:17:04] ID_LIKE="rhel fedora"
[2026-01-13 12:17:04] VERSION_ID="7"
[2026-01-13 12:17:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 12:17:04] ANSI_COLOR="0;31"
[2026-01-13 12:17:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 12:17:04] HOME_URL="https://www.centos.org/"
[2026-01-13 12:17:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 12:17:04] 
[2026-01-13 12:17:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 12:17:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 12:17:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 12:17:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 12:17:04] 
[2026-01-13 12:17:04] 2026-01-13 17:16:05,749 | INFO     | ***************************************
[2026-01-13 12:17:04] 2026-01-13 17:16:06,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 12:17:04] 2026-01-13 17:16:06,272 | INFO     | sufficient remaining disk space (73636249600 B)
[2026-01-13 12:17:04] 2026-01-13 17:16:06,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 12:17:04] 2026-01-13 17:16:06,273 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 12:17:04] 2026-01-13 17:16:06,273 | INFO     | update_server=False
[2026-01-13 12:17:04] 2026-01-13 17:16:06,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 12:17:04] 2026-01-13 17:16:06,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:17:04] 2026-01-13 17:16:06,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 12:17:04] 2026-01-13 17:16:06,682 | INFO     | all job control threads have been joined
[2026-01-13 12:17:04] 2026-01-13 17:16:06,699 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 12:17:04] 2026-01-13 17:16:06,699 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 12:17:04] 2026-01-13 17:16:06,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:17:04] 2026-01-13 17:16:06,699 | INFO     | will abort loop
[2026-01-13 12:17:04] 2026-01-13 17:16:06,782 | INFO     | all payload control threads have been joined
[2026-01-13 12:17:04] 2026-01-13 17:16:07,194 | INFO     | all data control threads have been joined
[2026-01-13 12:17:04] 2026-01-13 17:16:07,278 | INFO     | [job] retrieve thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,278 | INFO     | [job] queue monitor thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,283 | INFO     | [payload] validate_post thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,296 | INFO     | [payload] failed_post thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,406 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,517 | INFO     | [data] copytool_in thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,545 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,687 | INFO     | [job] control thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,704 | INFO     | [job] job monitor thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,787 | INFO     | [payload] control thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:07,916 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:08,109 | INFO     | [job] validate thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:08,199 | INFO     | [data] control thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:08,279 | INFO     | [data] copytool_out thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:08,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:08,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 12:17:04] 2026-01-13 17:16:12,569 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 12:17:04] 2026-01-13 17:16:37,506 | INFO     | PID=2601546 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 12:17:04] 2026-01-13 17:16:37,507 | INFO     | .. there are 8 such processes running
[2026-01-13 12:17:04] 2026-01-13 17:16:37,508 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 12:17:04] 2026-01-13 17:16:37,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 12:17:04] 2026-01-13 17:16:37,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 12:17:04] 2026-01-13 17:16:59,297 | INFO     | [monitor] cgroup control has ended
[2026-01-13 12:17:04] 2026-01-13 17:16:59,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702648948544)>', '<ExcThread(monitor, started 139702283769600)>']
[2026-01-13 12:17:04] 2026-01-13 17:16:59,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 12:17:04] 2026-01-13 17:16:59,620 | INFO     | [monitor] control thread has ended
[2026-01-13 12:17:04] 2026-01-13 17:17:04,627 | INFO     | all workflow threads have been joined
[2026-01-13 12:17:04] 2026-01-13 17:17:04,627 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 12:17:04] 2026-01-13 17:17:04,627 | INFO     | traces error code: 0
[2026-01-13 12:17:04] 2026-01-13 17:17:04,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 12:17:04] 2026-01-13 17:17:04,751 [wrapper] ==== pilot stdout END ====
[2026-01-13 12:17:04] 2026-01-13 17:17:04,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 12:17:04] 2026-01-13 17:17:04,759 [wrapper] pilotpid: 2601546
[2026-01-13 12:17:04] 2026-01-13 17:17:04,762 [wrapper] Pilot exit status: 0
[2026-01-13 12:17:04] 2026-01-13 17:17:04,771 [wrapper] pandaids: 6966860853
[2026-01-13 12:17:04] 2026-01-13 17:17:04,806 [wrapper] cleanup supervisor_pilot 1775908 2601547
[2026-01-13 12:17:04] 2026-01-13 17:17:04,808 [wrapper] Test setup, not cleaning
[2026-01-13 12:17:04] 2026-01-13 17:17:04,810 [wrapper] apfmon messages muted
[2026-01-13 12:17:04] 2026-01-13 17:17:04,812 [wrapper] ==== wrapper stdout END ====
[2026-01-13 12:17:04] 2026-01-13 17:17:04,814 [wrapper] ==== wrapper stderr END ====
[2026-01-13 12:17:04]  *** Error codes and diagnostics ***
[2026-01-13 12:17:04]     "exeErrorCode": 0,
[2026-01-13 12:17:04]     "exeErrorDiag": "",
[2026-01-13 12:17:04]     "pilotErrorCode": 0,
[2026-01-13 12:17:04]     "pilotErrorDiag": "",
[2026-01-13 12:17:04]  *** Listing of results directory ***
[2026-01-13 12:17:04] total 1824920
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:51 queuedata.json
[2026-01-13 12:17:04] -rwx------. 1 boincer umatlas      36322 Jan 12 03:52 runpilot2-wrapper.sh
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 12:17:04] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:56 run_atlas
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:56 job.xml
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas  321985684 Jan 12 03:56 EVNT.48118027._000201.pool.root.1
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas  321924638 Jan 12 03:56 EVNT.48118027._000202.pool.root.1
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:56 start_atlas.sh
[2026-01-13 12:17:04] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:56 shared
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas     592696 Jan 12 03:56 input.tar.gz
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:56 boinc_lockfile
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas       3435 Jan 12 03:56 pandaJob.out
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas         57 Jan 12 03:56 setup.sh.local
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas     987688 Jan 12 03:56 agis_schedconf.cvmfs.json
[2026-01-13 12:17:04] drwx------. 5 boincer umatlas       4096 Jan 12 03:56 pilot3
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas        534 Jan 13 12:06 boinc_task_state.xml
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas       6841 Jan 13 12:09 init_data.xml
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas 1184431588 Jan 13 12:15 HITS.48187943._000981.pool.root.1
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas       1055 Jan 13 12:15 memory_monitor_summary.json
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas    1516246 Jan 13 12:15 agis_ddmendpoints.agis.ALL.json
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas    3395593 Jan 13 12:15 log.48187943._000981.job.log.tgz.1
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas      28035 Jan 13 12:16 heartbeat.json
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas         95 Jan 13 12:16 pilot_heartbeat.json
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas         30 Jan 13 12:17 wrapper_checkpoint.txt
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 12:17 boinc_mmap_file
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas       5009 Jan 13 12:17 pilotlog.txt
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas   14807703 Jan 13 12:17 log.48187943._000981.job.log.1
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas        353 Jan 13 12:17 output.list
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas        620 Jan 13 12:17 runtime_log
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas   18247680 Jan 13 12:17 result.tar.gz
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas       9408 Jan 13 12:17 runtime_log.err
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas        665 Jan 13 12:17 HgnLDm4pSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEGnKDmu7g9jm.diag
[2026-01-13 12:17:04] -rw-r--r--. 1 boincer umatlas      21256 Jan 13 12:17 stderr.txt
[2026-01-13 12:17:04] HITS file was successfully produced:
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas 1184431588 Jan 13 12:15 shared/HITS.pool.root.1
[2026-01-13 12:17:04]  *** Contents of shared directory: ***
[2026-01-13 12:17:04] total 1803920
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas  321985684 Jan 12 03:56 ATLAS.root_0
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas  321924638 Jan 12 03:56 ATLAS.root_1
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:56 start_atlas.sh
[2026-01-13 12:17:04] -rw-r--r--. 2 boincer umatlas     592696 Jan 12 03:56 input.tar.gz
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas 1184431588 Jan 13 12:15 HITS.pool.root.1
[2026-01-13 12:17:04] -rw-------. 1 boincer umatlas   18247680 Jan 13 12:17 result.tar.gz
12:17:06 (2597874): run_atlas exited; CPU time 277048.239097
12:17:06 (2597874): called boinc_finish(0)

</stderr_txt>
]]>

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