Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:40 (65062): wrapper (7.7.26015): starting
03:55:40 (65062): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:55:40] Arguments: --nthreads 9
[2026-01-12 03:55:40] Threads: 9
[2026-01-12 03:55:40] Checking for CVMFS
[2026-01-12 03:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:55:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:55:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:55:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:55:40] 2.13.3.0 7038 26985 158920 155045 0 184 34015995 40960000 14354 16776704 0 42238675 99.758 28608349 45682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:55:40] CVMFS is ok
[2026-01-12 03:55:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:55:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:55:40] Further information can be found at the LHC@home message board.
[2026-01-12 03:55:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:55:40] Checking for apptainer binary...
[2026-01-12 03:55:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:55:40] Running /usr/bin/apptainer --version
[2026-01-12 03:55:40] apptainer version 1.4.5-2.el9
[2026-01-12 03:55:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:55:40] c-212-4.aglt2.org
[2026-01-12 03:55:40] apptainer works
[2026-01-12 03:55:40] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:55:40] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:55:41] Starting ATLAS job with PandaID=6966857382
[2026-01-12 03:55:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:28:11]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:28:11] 2026-01-13 05:26:56,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:26:58,261 | INFO     | time since job start (73864s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:26:59,472 | INFO     | monitor loop #4707: job 0:6966857382 is in state 'finished'
[2026-01-13 00:28:11] 2026-01-13 05:26:59,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:27:00,269 | INFO     | time since job start (73866s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:01,982 | INFO     | monitor loop #4708: job 0:6966857382 is in state 'finished'
[2026-01-13 00:28:11] 2026-01-13 05:27:01,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:27:02,277 | INFO     | time since job start (73868s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:04,295 | INFO     | time since job start (73870s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:04,489 | INFO     | monitor loop #4709: job 0:6966857382 is in state 'finished'
[2026-01-13 00:28:11] 2026-01-13 05:27:04,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:27:06,302 | INFO     | time since job start (73872s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:07,000 | INFO     | monitor loop #4710: job 0:6966857382 is in state 'finished'
[2026-01-13 00:28:11] 2026-01-13 05:27:07,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:27:08,312 | INFO     | time since job start (73874s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:09,517 | INFO     | monitor loop #4711: job 0:6966857382 is in state 'finished'
[2026-01-13 00:28:11] 2026-01-13 05:27:09,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:28:11] 2026-01-13 05:27:10,321 | INFO     | time since job start (73876s) is within the limit (349056.0s)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,197 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 00:28:11] 2026-01-13 05:27:11,207 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3186.7352708333333
[2026-01-13 00:28:11] 2026-01-13 05:27:11,267 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966857382/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,268 | INFO     | extracted standard info from prmon json
[2026-01-13 00:28:11] 2026-01-13 05:27:11,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:28:11] 2026-01-13 05:27:11,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:28:11] 2026-01-13 05:27:11,348 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:28:11] 2026-01-13 05:27:11,350 | INFO     | sum of square deviations: 549296788306.7442
[2026-01-13 00:28:11] 2026-01-13 05:27:11,520 | INFO     | sum of deviations: 1247801606512.9084
[2026-01-13 00:28:11] 2026-01-13 05:27:11,521 | INFO     | mean x: 1768245063.9280992
[2026-01-13 00:28:11] 2026-01-13 05:27:11,521 | INFO     | mean y: 3630246.711570248
[2026-01-13 00:28:11] 2026-01-13 05:27:11,521 | INFO     | intersect: -4013176474.9870653
[2026-01-13 00:28:11] 2026-01-13 05:27:11,522 | INFO     | chi2: 18.07903498592829
[2026-01-13 00:28:11] 2026-01-13 05:27:11,523 | INFO     | sum of square deviations: 542515892094.64374
[2026-01-13 00:28:11] 2026-01-13 05:27:11,722 | INFO     | sum of deviations: 1786500514224.1428
[2026-01-13 00:28:11] 2026-01-13 05:27:11,722 | INFO     | mean x: 1768244911.4381742
[2026-01-13 00:28:11] 2026-01-13 05:27:11,722 | INFO     | mean y: 3642359.444813278
[2026-01-13 00:28:11] 2026-01-13 05:27:11,722 | INFO     | intersect: -5819174058.636131
[2026-01-13 00:28:11] 2026-01-13 05:27:11,723 | INFO     | chi2: 14.432197274593626
[2026-01-13 00:28:11] 2026-01-13 05:27:11,723 | INFO     | current chi2=14.432197274593626 (change=20.17163921732082 %)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,723 | INFO     | right removable region: 1204
[2026-01-13 00:28:11] 2026-01-13 05:27:11,728 | INFO     | sum of square deviations: 542514320866.265
[2026-01-13 00:28:11] 2026-01-13 05:27:11,779 | INFO     | sum of deviations: 871622104671.0068
[2026-01-13 00:28:11] 2026-01-13 05:27:11,779 | INFO     | mean x: 1768245216.4356847
[2026-01-13 00:28:11] 2026-01-13 05:27:11,779 | INFO     | mean y: 3638693.6
[2026-01-13 00:28:11] 2026-01-13 05:27:11,779 | INFO     | intersect: -2837284684.5388827
[2026-01-13 00:28:11] 2026-01-13 05:27:11,784 | INFO     | chi2: 16.06383413288333
[2026-01-13 00:28:11] 2026-01-13 05:27:11,784 | INFO     | current chi2=16.06383413288333 (change=11.146617364331 %)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,784 | INFO     | left removable region: 10
[2026-01-13 00:28:11] 2026-01-13 05:27:11,785 | INFO     | sum of square deviations: 527791955663.3737
[2026-01-13 00:28:11] 2026-01-13 05:27:11,840 | INFO     | sum of deviations: 1428645425763.692
[2026-01-13 00:28:11] 2026-01-13 05:27:11,840 | INFO     | mean x: 1768245185.9530988
[2026-01-13 00:28:11] 2026-01-13 05:27:11,840 | INFO     | mean y: 3655220.530150754
[2026-01-13 00:28:11] 2026-01-13 05:27:11,840 | INFO     | intersect: -4782691690.281377
[2026-01-13 00:28:11] 2026-01-13 05:27:11,841 | INFO     | chi2: 11.681916279888624
[2026-01-13 00:28:11] 2026-01-13 05:27:11,841 | INFO     | current memory leak: 2.71 B/s (using 1194 data points, chi2=11.68)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,842 | INFO     | could have reported an average CPU frequency of 3205 MHz (44 samples)
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | ..............................
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . Timing measurements:
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . get job = 0 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . initial setup = 2 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . payload setup = 10 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . stage-in = 0 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . payload execution = 73809 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . stage-out = 9 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | . log creation = 3 s
[2026-01-13 00:28:11] 2026-01-13 05:27:11,843 | INFO     | ..............................
[2026-01-13 00:28:11] 2026-01-13 05:27:12,096 | INFO     | 
[2026-01-13 00:28:11] 2026-01-13 05:27:12,097 | INFO     | job summary report
[2026-01-13 00:28:11] 2026-01-13 05:27:12,097 | INFO     | --------------------------------------------------
[2026-01-13 00:28:11] 2026-01-13 05:27:12,097 | INFO     | PanDA job id: 6966857382
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | task id: 48187943
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | errors: (none)
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | pilot state: finished 
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | transexitcode: 0
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | exeerrorcode: 0
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | exeerrordiag: 
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | exitcode: 0
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | exitmsg: OK
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | cpuconsumptiontime: 229635 s
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | nevents: 2050
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | neventsw: 0
[2026-01-13 00:28:11] 2026-01-13 05:27:12,098 | INFO     | pid: 82671
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | pgrp: 82671
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | corecount: 9
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | event service: False
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | sizes: {0: 2284621, 6: 2284883, 11: 2284911, 73824: 2363084, 73833: 2372082, 73836: 2372138, 73861: 2372512}
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | --------------------------------------------------
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | 
[2026-01-13 00:28:11] 2026-01-13 05:27:12,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 00:28:11] 2026-01-13 05:27:12,322 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:28:11] 2026-01-13 05:27:12,324 | INFO     | job 6966857382 has completed (purged errors)
[2026-01-13 00:28:11] 2026-01-13 05:27:12,325 | INFO     | overall cleanup function is called
[2026-01-13 00:28:11] 2026-01-13 05:27:13,392 | INFO     | --- collectZombieJob: --- 10, [82671]
[2026-01-13 00:28:11] 2026-01-13 05:27:13,392 | INFO     | zombie collector waiting for pid 82671
[2026-01-13 00:28:11] 2026-01-13 05:27:13,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:28:11] 2026-01-13 05:27:13,392 | INFO     | collected zombie processes
[2026-01-13 00:28:11] 2026-01-13 05:27:13,392 | INFO     | will attempt to kill all subprocesses of pid=82671
[2026-01-13 00:28:11] 2026-01-13 05:27:14,477 | INFO     | process IDs to be killed: [82671] (in reverse order)
[2026-01-13 00:28:11] 2026-01-13 05:27:14,794 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:28:11] 2026-01-13 05:27:14,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:28:11] 2026-01-13 05:27:14,826 | INFO     | did not find any defunct processes belonging to 82671
[2026-01-13 00:28:11] 2026-01-13 05:27:14,858 | INFO     | did not find any defunct processes belonging to 82671
[2026-01-13 00:28:11] 2026-01-13 05:27:14,858 | INFO     | ready for new job
[2026-01-13 00:28:11] 2026-01-13 05:27:14,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:28:11] 2026-01-13 05:27:14,885 | INFO     | ***************************************
[2026-01-13 00:28:11] 2026-01-13 05:27:14,885 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:28:11] 2026-01-13 05:27:14,885 | INFO     | ***************************************
[2026-01-13 00:28:11] 2026-01-13 05:27:14,885 | INFO     | 
[2026-01-13 00:28:11] 2026-01-13 05:27:14,898 | INFO     | architecture information:
[2026-01-13 00:28:11] 2026-01-13 05:27:14,953 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:28:11] 2026-01-13 05:27:15,009 | INFO     | cat /etc/os-release:
[2026-01-13 00:28:11] NAME="CentOS Linux"
[2026-01-13 00:28:11] VERSION="7 (Core)"
[2026-01-13 00:28:11] ID="centos"
[2026-01-13 00:28:11] ID_LIKE="rhel fedora"
[2026-01-13 00:28:11] VERSION_ID="7"
[2026-01-13 00:28:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:28:11] ANSI_COLOR="0;31"
[2026-01-13 00:28:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:28:11] HOME_URL="https://www.centos.org/"
[2026-01-13 00:28:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:28:11] 
[2026-01-13 00:28:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:28:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:28:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:28:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:28:11] 
[2026-01-13 00:28:11] 2026-01-13 05:27:15,010 | INFO     | ***************************************
[2026-01-13 00:28:11] 2026-01-13 05:27:15,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 00:28:11] 2026-01-13 05:27:15,566 | INFO     | sufficient remaining disk space (120012668928 B)
[2026-01-13 00:28:11] 2026-01-13 05:27:15,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:28:11] 2026-01-13 05:27:15,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:28:11] 2026-01-13 05:27:15,567 | INFO     | update_server=False
[2026-01-13 00:28:11] 2026-01-13 05:27:15,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:28:11] 2026-01-13 05:27:15,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:28:11] 2026-01-13 05:27:15,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:28:11] 2026-01-13 05:27:15,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:28:11] 2026-01-13 05:27:15,606 | INFO     | aborting loop
[2026-01-13 00:28:11] 2026-01-13 05:27:16,404 | INFO     | all data control threads have been joined
[2026-01-13 00:28:11] 2026-01-13 05:27:16,573 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,597 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,621 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,635 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,731 | INFO     | all job control threads have been joined
[2026-01-13 00:28:11] 2026-01-13 05:27:16,742 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,785 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:16,789 | INFO     | [job] validate thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:17,003 | INFO     | all payload control threads have been joined
[2026-01-13 00:28:11] 2026-01-13 05:27:17,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:28:11] 2026-01-13 05:27:17,273 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:17,411 | INFO     | [data] control thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:17,574 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:17,737 | INFO     | [job] control thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:18,009 | INFO     | [payload] control thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:18,020 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:18,163 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:18,187 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:19,592 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:28:11] 2026-01-13 05:27:44,285 | INFO     | PID=69811 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 00:28:11] 2026-01-13 05:27:44,285 | INFO     | .. there are 19 such processes running
[2026-01-13 00:28:11] 2026-01-13 05:27:44,285 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:28:11] 2026-01-13 05:27:44,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:28:11] 2026-01-13 05:27:44,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:28:11] 2026-01-13 05:28:03,341 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:28:11] 2026-01-13 05:28:05,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128106248000)>', '<ExcThread(monitor, started 140127670105856)>']
[2026-01-13 00:28:11] 2026-01-13 05:28:05,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:28:11] 2026-01-13 05:28:05,417 | INFO     | [monitor] control thread has ended
[2026-01-13 00:28:11] 2026-01-13 05:28:10,182 | INFO     | all workflow threads have been joined
[2026-01-13 00:28:11] 2026-01-13 05:28:10,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:28:11] 2026-01-13 05:28:10,182 | INFO     | traces error code: 0
[2026-01-13 00:28:11] 2026-01-13 05:28:10,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:28:11] 2026-01-13 05:28:10,564 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:28:11] 2026-01-13 05:28:10,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:28:11] 2026-01-13 05:28:10,621 [wrapper] pilotpid: 69811
[2026-01-13 00:28:11] 2026-01-13 05:28:10,649 [wrapper] Pilot exit status: 0
[2026-01-13 00:28:11] 2026-01-13 05:28:10,751 [wrapper] pandaids: 6966857382
[2026-01-13 00:28:11] 2026-01-13 05:28:11,263 [wrapper] cleanup supervisor_pilot 2775309 69812
[2026-01-13 00:28:11] 2026-01-13 05:28:11,272 [wrapper] Test setup, not cleaning
[2026-01-13 00:28:11] 2026-01-13 05:28:11,274 [wrapper] apfmon messages muted
[2026-01-13 00:28:11] 2026-01-13 05:28:11,277 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:28:11] 2026-01-13 05:28:11,279 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:28:11]  *** Error codes and diagnostics ***
[2026-01-13 00:28:11]     "exeErrorCode": 0,
[2026-01-13 00:28:11]     "exeErrorDiag": "",
[2026-01-13 00:28:11]     "pilotErrorCode": 0,
[2026-01-13 00:28:11]     "pilotErrorDiag": "",
[2026-01-13 00:28:11]  *** Listing of results directory ***
[2026-01-13 00:28:11] total 1508008
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:51 queuedata.json
[2026-01-13 00:28:11] -rwx------. 1 boincer umatlas      36322 Jan 12 03:52 runpilot2-wrapper.sh
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:28:11] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:55 run_atlas
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:55 job.xml
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas  322385664 Jan 12 03:55 EVNT.48118027._000131.pool.root.1
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:55 start_atlas.sh
[2026-01-13 00:28:11] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:55 shared
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas     592608 Jan 12 03:55 input.tar.gz
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:55 boinc_lockfile
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas       2896 Jan 12 03:55 pandaJob.out
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas         57 Jan 12 03:55 setup.sh.local
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas     987688 Jan 12 03:55 agis_schedconf.cvmfs.json
[2026-01-13 00:28:11] drwx------. 5 boincer umatlas       4096 Jan 12 03:55 pilot3
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas        533 Jan 12 23:58 boinc_task_state.xml
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas 1193057292 Jan 13 00:25 HITS.48187943._000636.pool.root.1
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas       1047 Jan 13 00:26 memory_monitor_summary.json
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas    1516240 Jan 13 00:26 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas    2774691 Jan 13 00:26 log.48187943._000636.job.log.tgz.1
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas         95 Jan 13 00:26 pilot_heartbeat.json
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas      26855 Jan 13 00:27 heartbeat.json
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas       6957 Jan 13 00:28 init_data.xml
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas       4823 Jan 13 00:28 pilotlog.txt
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 00:28 boinc_mmap_file
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas    9625219 Jan 13 00:28 log.48187943._000636.job.log.1
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas         29 Jan 13 00:28 wrapper_checkpoint.txt
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas        353 Jan 13 00:28 output.list
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas        620 Jan 13 00:28 runtime_log
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas   12441600 Jan 13 00:28 result.tar.gz
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas        659 Jan 13 00:28 txvKDm4pSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeFnKDmooiyLn.diag
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas       9338 Jan 13 00:28 runtime_log.err
[2026-01-13 00:28:11] -rw-r--r--. 1 boincer umatlas      20515 Jan 13 00:28 stderr.txt
[2026-01-13 00:28:11] HITS file was successfully produced:
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas 1193057292 Jan 13 00:25 shared/HITS.pool.root.1
[2026-01-13 00:28:11]  *** Contents of shared directory: ***
[2026-01-13 00:28:11] total 1492680
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas  322385664 Jan 12 03:55 ATLAS.root_0
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:55 start_atlas.sh
[2026-01-13 00:28:11] -rw-r--r--. 2 boincer umatlas     592608 Jan 12 03:55 input.tar.gz
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas 1193057292 Jan 13 00:25 HITS.pool.root.1
[2026-01-13 00:28:11] -rw-------. 1 boincer umatlas   12441600 Jan 13 00:28 result.tar.gz
00:28:13 (65062): run_atlas exited; CPU time 229520.503045
00:28:13 (65062): called boinc_finish(0)

</stderr_txt>
]]>

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